BLASTX nr result

ID: Coptis24_contig00002856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002856
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06
gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]       57   3e-06
ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK...    57   3e-06

>ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|222868632|gb|EEF05763.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = -2

Query: 498 TDGYQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKKAAEKVHVT 322
           +D Y   ++K    PS +   P YP++   FNNK +             P K+ +KV VT
Sbjct: 19  SDDYHAYISKLSRMPSVLHGAPQYPSVRKAFNNKRN-------------PTKSPKKVQVT 65

Query: 321 KHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199
           + V   + N GN +   IEE +++EA+ FI++KH+ LEL K
Sbjct: 66  EQVQIIEQN-GNQKSEVIEETVDHEAEGFIQQKHKGLELCK 105


>gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = -2

Query: 489 YQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 325
           Y   +++    PS I   P YP++H  FNNK  ++   N   +  V KK    + +KV V
Sbjct: 22  YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPTRSTKKVRV 81

Query: 324 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199
            + V     N GN +   IEED++ EAD FIK+K +  EL K
Sbjct: 82  KEQVQVIDQN-GNRKSEDIEEDVDAEADGFIKQKQKGFELCK 122


>ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|222858745|gb|EEE96292.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = -2

Query: 489 YQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 325
           Y   +++    PS I   P YP++H  FNNK  ++   N   +  V KK    + +KV V
Sbjct: 53  YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPARSTKKVRV 112

Query: 324 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199
            + V     N GN +   IEED++ EAD FIK+K +  EL K
Sbjct: 113 KEQVQVIDQN-GNRKSEDIEEDVDDEADGFIKQKQKGFELCK 153


>gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK96149.1| unknown
           [Populus trichocarpa]
          Length = 129

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
 Frame = -2

Query: 489 YQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 325
           Y   +++    PS I   P YP++H  FNNK  ++   N   +  V KK    + +KV V
Sbjct: 22  YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPARSTKKVRV 81

Query: 324 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199
            + V     N GN +   IEED++ EAD FIK+K +  EL K
Sbjct: 82  KEQVQVIDQN-GNRKSEDIEEDVDDEADGFIKQKQKGFELCK 122


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