BLASTX nr result
ID: Coptis24_contig00002856
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002856 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|2... 58 1e-06 gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides] 57 3e-06 ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|2... 57 3e-06 gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK... 57 3e-06 >ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|222868632|gb|EEF05763.1| predicted protein [Populus trichocarpa] Length = 112 Score = 58.2 bits (139), Expect = 1e-06 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Frame = -2 Query: 498 TDGYQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKKAAEKVHVT 322 +D Y ++K PS + P YP++ FNNK + P K+ +KV VT Sbjct: 19 SDDYHAYISKLSRMPSVLHGAPQYPSVRKAFNNKRN-------------PTKSPKKVQVT 65 Query: 321 KHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199 + V + N GN + IEE +++EA+ FI++KH+ LEL K Sbjct: 66 EQVQIIEQN-GNQKSEVIEETVDHEAEGFIQQKHKGLELCK 105 >gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides] Length = 129 Score = 57.0 bits (136), Expect = 3e-06 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Frame = -2 Query: 489 YQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 325 Y +++ PS I P YP++H FNNK ++ N + V KK + +KV V Sbjct: 22 YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPTRSTKKVRV 81 Query: 324 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199 + V N GN + IEED++ EAD FIK+K + EL K Sbjct: 82 KEQVQVIDQN-GNRKSEDIEEDVDAEADGFIKQKQKGFELCK 122 >ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|222858745|gb|EEE96292.1| predicted protein [Populus trichocarpa] Length = 160 Score = 56.6 bits (135), Expect = 3e-06 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Frame = -2 Query: 489 YQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 325 Y +++ PS I P YP++H FNNK ++ N + V KK + +KV V Sbjct: 53 YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPARSTKKVRV 112 Query: 324 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199 + V N GN + IEED++ EAD FIK+K + EL K Sbjct: 113 KEQVQVIDQN-GNRKSEDIEEDVDDEADGFIKQKQKGFELCK 153 >gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK96149.1| unknown [Populus trichocarpa] Length = 129 Score = 56.6 bits (135), Expect = 3e-06 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Frame = -2 Query: 489 YQVRVTKTEWTPSTID-VPHYPNLHFVFNNKAHEDLYGNRYEEQVVPKK----AAEKVHV 325 Y +++ PS I P YP++H FNNK ++ N + V KK + +KV V Sbjct: 22 YHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEARQDNVNKKNPARSTKKVRV 81 Query: 324 TKHVHYEQINEGNGRMTKIEEDINYEADDFIKRKHRALELSK 199 + V N GN + IEED++ EAD FIK+K + EL K Sbjct: 82 KEQVQVIDQN-GNRKSEDIEEDVDDEADGFIKQKQKGFELCK 122