BLASTX nr result

ID: Coptis24_contig00002852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002852
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272399.1| PREDICTED: methyltransferase-like protein 1-...    92   6e-17
emb|CAN63666.1| hypothetical protein VITISV_013183 [Vitis vinifera]    92   6e-17
emb|CBI22683.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002318208.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002513672.1| conserved hypothetical protein [Ricinus comm...    82   4e-14

>ref|XP_002272399.1| PREDICTED: methyltransferase-like protein 1-like [Vitis vinifera]
          Length = 1192

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/120 (45%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
 Frame = +1

Query: 1    VLTTPDIEGLRXXXXXXXXXXXXXXXXXXX--TTVASVNKRPAATSPQNRTILSLNQEGS 174
            V+TTP+IE LR                     TT  S NKRPA  SPQN   LS+NQE S
Sbjct: 1073 VMTTPEIESLRPKSPMKNQQQLQQQQSTSISLTTANSSNKRPAGNSPQNPNALSMNQEAS 1132

Query: 175  SSNASMPVQWTSPMVGIKAPDTVNVVRDDKSFDGYGYEPSGGQAIGDQLNFVSQGASNLL 354
            SSN S P  W SPM   K  +T N+  +DK  D YGY  S GQ  GD L+F      NLL
Sbjct: 1133 SSNPSTPAPWASPMDAFKGRETGNMSSEDKGVDIYGYNTSFGQINGDYLDFEGHRGMNLL 1192


>emb|CAN63666.1| hypothetical protein VITISV_013183 [Vitis vinifera]
          Length = 1229

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 54/120 (45%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
 Frame = +1

Query: 1    VLTTPDIEGLRXXXXXXXXXXXXXXXXXXX--TTVASVNKRPAATSPQNRTILSLNQEGS 174
            V+TTP+IE LR                     TT  S NKRPA  SPQN   LS+NQE S
Sbjct: 1110 VMTTPEIESLRPKSPMKNQQQLQQQQSTSISLTTANSSNKRPAGNSPQNPNALSMNQEAS 1169

Query: 175  SSNASMPVQWTSPMVGIKAPDTVNVVRDDKSFDGYGYEPSGGQAIGDQLNFVSQGASNLL 354
            SSN S P  W SPM   K  +T N+  +DK  D YGY  S GQ  GD L+F      NLL
Sbjct: 1170 SSNPSTPAPWASPMDAFKGRETGNMSSEDKGVDIYGYNTSFGQINGDYLDFEGHRGMNLL 1229


>emb|CBI22683.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 51/111 (45%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    VLTTPDIEGLRXXXXXXXXXXXXXXXXXXX--TTVASVNKRPAATSPQNRTILSLNQEGS 174
            V+TTP+IE LR                     TT  S NKRPA  SPQN   LS+NQE S
Sbjct: 838  VMTTPEIESLRPKSPMKNQQQLQQQQSTSISLTTANSSNKRPAGNSPQNPNALSMNQEAS 897

Query: 175  SSNASMPVQWTSPMVGIKAPDTVNVVRDDKSFDGYGYEPSGGQAIGDQLNF 327
            SSN S P  W SPM   K  +T N+  +DK  D YGY  S GQ  GD L+F
Sbjct: 898  SSNPSTPAPWASPMDAFKGRETGNMSSEDKGVDIYGYNTSFGQINGDYLDF 948


>ref|XP_002318208.1| predicted protein [Populus trichocarpa] gi|222858881|gb|EEE96428.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/119 (44%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   VLTTPDIEGLRXXXXXXXXXXXXXXXXXXXTTVASVNKRPAATSPQNRTILSLNQEGSSS 180
           V+TTPDIE LR                   T   S N+RPA  SPQN +  SLNQE SS+
Sbjct: 434 VVTTPDIEALRPKSPMKNQQQQSVSISL--TAANSSNRRPAGNSPQNPSTFSLNQEASSA 491

Query: 181 NASMPVQW-TSPMVGIKAPDTVNVVRDDKSFDGYGYEPSGGQAIGDQLNFVSQGASNLL 354
           N S P  W +SPM G +  +  N+  +DK FD YGY    GQA GD L+F S    NLL
Sbjct: 492 NPSTPAPWASSPMEGCRGREGGNMPSEDKVFDMYGY---SGQANGDYLDFESHRPMNLL 547


>ref|XP_002513672.1| conserved hypothetical protein [Ricinus communis]
            gi|223547580|gb|EEF49075.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1180

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 52/120 (43%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
 Frame = +1

Query: 1    VLTTPDIEGLRXXXXXXXXXXXXXXXXXXXTTVASVNKRPAATSPQNRT--ILSLNQEGS 174
            V+TTP+IE LR                   T ++S N+R A  SP N +   LSLNQE S
Sbjct: 1065 VVTTPEIEALRPKSPMKNQQQQQSTSISLTTAISS-NRRTAGNSPHNPSNFTLSLNQEAS 1123

Query: 175  SSNASMPVQWTSPMVGIKAPDTVNVVRDDKSFDGYGYEPSGGQAIGDQLNFVSQGASNLL 354
            SSN S P  W SPM G +  +  N+  DDK FD YGY    GQA GD L+F S    N+L
Sbjct: 1124 SSNPSTPAPWASPMEGFRGREGGNMPSDDKLFDMYGY---SGQANGDYLDFESHRPMNVL 1180


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