BLASTX nr result

ID: Coptis24_contig00002847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002847
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262760.2| PREDICTED: uncharacterized protein LOC100254...   132   1e-28
ref|XP_002300694.1| predicted protein [Populus trichocarpa] gi|2...   120   7e-25
ref|XP_002307738.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-19
dbj|BAJ53105.1| JHL20J20.12 [Jatropha curcas]                         101   4e-19
ref|XP_002279439.2| PREDICTED: uncharacterized protein LOC100242...    82   3e-13

>ref|XP_002262760.2| PREDICTED: uncharacterized protein LOC100254073 [Vitis vinifera]
          Length = 331

 Score =  132 bits (333), Expect = 1e-28
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 28/301 (9%)
 Frame = +3

Query: 60  NGEVEKKKQSHK----EEGGHTEHKVTLCKEMKECEIEQLERSDLSEEHGQPAGILNLCD 227
           NGE+E +K+ HK    ++      K    +  ++ E +  E+S L+EEHG P G  N+C 
Sbjct: 66  NGEIEHQKKGHKKRLKDDMSQENQKGGNHQNSRKNETDHFEKSTLTEEHGHPIGSENICY 125

Query: 228 SSDSTQKSRKRKNRSLPSDGNHNQSECLYVILFFGGYVVWPASFS*LY*KVLSIMKGTML 407
           SSD +  S KR+  S P +G HN                                 G + 
Sbjct: 126 SSDGSLNSNKRQKYSSPPNGKHNS--------------------------------GNIF 153

Query: 408 RIRLPLQRHKDPEKLVIKEQLCSTSGGTEIIAQKMADIS--------------------- 524
           RIRLPLQRHKD E L  K Q CS  G T++  Q+M D++                     
Sbjct: 154 RIRLPLQRHKDLEVLPSKGQPCSALGRTDVFVQEMCDLAPKPGRREGEHLCFASWITGQG 213

Query: 525 --SNLTIKQPCLDSGRIEIAVQDSVKHAAVAKLSTRKSITPQTDVQLRETLDNWVPSAVQ 698
               L  K PC  S   EI  Q      A A +S+  S +   ++++++ LD  VP  +Q
Sbjct: 214 LDHKLGRKNPCPSSAAHEIFGQK--PEIAPASISS-GSDSSLLELRIKDLLDYSVPPLMQ 270

Query: 699 FEQMDAENLEWLLDMPPSKHEA-KRSKVSDGACCRENPSLWPRACYLPEVDIYALPYTVP 875
            +   ++N +WLL+   + + A +R + +       N + W R CYLPEVDIYALP+TVP
Sbjct: 271 SQFPASDNQDWLLETKQNHNLAPERCETNHDGGSYGNSAQWSRVCYLPEVDIYALPFTVP 330

Query: 876 Y 878
           +
Sbjct: 331 F 331


>ref|XP_002300694.1| predicted protein [Populus trichocarpa] gi|222842420|gb|EEE79967.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  120 bits (301), Expect = 7e-25
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 21/290 (7%)
 Frame = +3

Query: 72  EKKKQSHKEEGGHT---------EHKVTLCKEMKECEIEQLERSDLSEEHGQPAGILNLC 224
           +K ++  KE    T         E K  L KE +E    + E+S L+EEH +P  + N+C
Sbjct: 33  KKGRRQRKENSNQTGYYGGKSQQEGKGRLPKEKRE----EAEKSGLTEEHNEPVCLQNVC 88

Query: 225 DSSDSTQKSRKRKNRSLPSDGNHNQSECLYVILFFGGYVVWPASFS*LY*KVLSIMKGTM 404
             SD   +S KR  R L S    +                                   +
Sbjct: 89  YLSDDGIRSNKR--RKLDSSTTTDDKP------------------------------RNV 116

Query: 405 LRIRLPLQRHKDPEKLVIKEQLCSTSGGTEIIA--QKMADISSNLTIKQPC--------- 551
            RIRLPL RHK+P+  +  + LCSTSGG + ++   ++  +S   T+             
Sbjct: 117 FRIRLPLTRHKEPDVSLNSKGLCSTSGGADSVSGQSEIVRLSDQETVNSKAGELASPPEN 176

Query: 552 LDSGRIEIAVQDSVKHAAVAKLSTRKSITPQTDVQLRETLDNWVPSAVQFEQMDAENLEW 731
           +    +   ++ SV   +  +   RK++  + D Q +  +++WVP  +QFE  D+++ EW
Sbjct: 177 IPCSSVSDKLESSVSETSWFRFHDRKTL--KADSQYKGLVEDWVPPPLQFELKDSDDEEW 234

Query: 732 LLD-MPPSKHEAKRSKVSDGACCRENPSLWPRACYLPEVDIYALPYTVPY 878
           L   +   +H  KR        CRE+ +LWPRA YLPE D+YALPYT+P+
Sbjct: 235 LFGTLKQERHGNKRLNARHDISCRESSTLWPRAHYLPESDVYALPYTIPF 284


>ref|XP_002307738.1| predicted protein [Populus trichocarpa] gi|222857187|gb|EEE94734.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  103 bits (256), Expect = 1e-19
 Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 31/300 (10%)
 Frame = +3

Query: 72  EKKKQSHKEEG----------GHTEHKVTLCKEMKECEIEQLERSDLSEEHGQPAGILNL 221
           +K+++ H++E            H + K  L +E KE    + E+SDL+EEH +P  + N+
Sbjct: 38  KKERRKHRKENKDQICYTVGKSHQKGKTFLPREKKE----EAEKSDLTEEHNEPVCLQNI 93

Query: 222 CDSSDSTQKSRKRKNRSLPSDGNHNQSECLYVILFFGGYVVWPASFS*LY*KVLSIMKGT 401
           C  SD   +S K+  R L    N ++   ++                             
Sbjct: 94  CYLSDDGIRSNKK--RKLEQATNDDKPRNVF----------------------------- 122

Query: 402 MLRIRLPLQRHKDPEKLVIKEQLCSTSG----------GTEIIAQKMADISSNLTI---- 539
             RIRLPL RHK+P+  +  E LCSTSG          G  +  Q+  +  +   +    
Sbjct: 123 --RIRLPLTRHKEPDVPLNSEGLCSTSGRADSVSGQNEGVHLSHQETVNSKAGTVVGELA 180

Query: 540 ---KQPCLDSGRIEIAVQDSVKHAAVAKLSTRKSITPQTDVQLRETLDNWVPSAVQFEQM 710
              K PC+     +  V      + +++         + D   +  +++WV    QFE  
Sbjct: 181 SPEKMPCISVSEKKSTV---CHESGISRFKLPNKKMRKADSPYKVLIEDWVSPPPQFELN 237

Query: 711 DAENLEWLLDMPPSKHEAKRSKVSDGAC----CRENPSLWPRACYLPEVDIYALPYTVPY 878
           D+++ EWL +   SK E   +K+ + AC    C E+ SL+PR  YLPE D+YALPYT+P+
Sbjct: 238 DSDDQEWLSEA--SKRERHGNKILN-ACRDVLCHES-SLFPRGHYLPEADVYALPYTIPF 293


>dbj|BAJ53105.1| JHL20J20.12 [Jatropha curcas]
          Length = 307

 Score =  101 bits (251), Expect = 4e-19
 Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 20/291 (6%)
 Frame = +3

Query: 66  EVEKKKQSHKEEGGHTEHKVTLCKEM-----KECEIEQLERSDLSEEHGQPAGILNLCDS 230
           E +++K+S KE    T +    C +       + + E+ ERS L+EEH QP    +LC S
Sbjct: 52  EKKERKKSRKENKEDT-YIADRCNQQDKRLPSKVQEEEAERSGLTEEHDQPVCSQSLCYS 110

Query: 231 SDSTQKSRKRKNRSLPSDGNHNQSECLYVILFFGGYVVWPASFS*LY*KVLSIMKGTMLR 410
            DST+ S KRK   L                    Y +  +S             G ++R
Sbjct: 111 PDSTRSSDKRKRDDL-------------------SYNITKSS-------------GNIIR 138

Query: 411 IRLPLQRHKDPEKLVIKEQLCSTSGGTEIIAQKMA------------DISSNLTIKQPCL 554
           IRLPLQ+H++ +     E + S+S  ++ +AQK              +  + + I  P +
Sbjct: 139 IRLPLQKHREVDASTSGEHVRSSSRKSDFLAQKQIITVPDKEQPSSINSKTGINISDPIV 198

Query: 555 DSGRIEIAVQDSVKHAAVAK--LSTRKSITPQTDVQLRETLDNWVPSAVQFEQMDAENLE 728
                  A +DSV+   +    +S+R       +   ++ L++WVP  +  +Q +  + E
Sbjct: 199 TPCANLEADKDSVRKRVITASGVSSRVRGVQNAESLYKDLLEDWVPLPLGCDQNNIGDQE 258

Query: 729 WLLDMPPS-KHEAKRSKVSDGACCRENPSLWPRACYLPEVDIYALPYTVPY 878
           WL       KH+  +S+  +   C  + +LWP A YLPE ++YALPYTVP+
Sbjct: 259 WLFGTKKQEKHKRLKSQCDEP--CHGSSTLWPCARYLPEAEVYALPYTVPF 307


>ref|XP_002279439.2| PREDICTED: uncharacterized protein LOC100242117 [Vitis vinifera]
          Length = 405

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 41/193 (21%)
 Frame = +3

Query: 423 LQRHKDPEKLVIKEQ---------------------LCSTSGGTEIIAQKMADISSNLTI 539
           + +HK+PE L+ KEQ                      CSTSG  ++ AQ+  +IS     
Sbjct: 218 ISKHKEPETLLRKEQNRSVWMPLTNLREPEASLRAESCSTSGRVDLPAQQKYEISGQSIE 277

Query: 540 KQP--------------------CLDSGRIEIAVQDSVKHAAVAKLSTRKSITPQTDVQL 659
             P                    C  S   EI VQ+    +  ++ S  KS   + + + 
Sbjct: 278 APPIFSMRTSTVDQKLNPDQQLLCSTSKVPEIVVQNDANASKGSRSS--KSKKQRAESRY 335

Query: 660 RETLDNWVPSAVQFEQMDAENLEWLLDMPPSKHEAKRSKVSDGACCRENPSLWPRACYLP 839
           +  +++WVP  +Q EQ D ++ EWL      +HE+KR +  +      +   WPRA YLP
Sbjct: 336 KALVEDWVPPLLQAEQTDLDDQEWLFQKHGDRHESKRHETINYDLSYGS---WPRAQYLP 392

Query: 840 EVDIYALPYTVPY 878
           E D+YALPYTVP+
Sbjct: 393 EADVYALPYTVPF 405



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 70/244 (28%), Positives = 102/244 (41%), Gaps = 6/244 (2%)
 Frame = +3

Query: 105 GHTEHKVTLCKEMKECEIEQLERSDLSEEHGQPAGILNLCDSSDSTQKSRKRKNRSLPSD 284
           G+   K    + +++ E EQLE+SDL+EE+GQP    N C SSDSTQ SRKRK  +  S 
Sbjct: 38  GNLNDKKGQSQRIRKDEAEQLEKSDLTEEYGQPIYSQNSCHSSDSTQNSRKRKRDTSLSS 97

Query: 285 GNHNQSECLYVILFFGGYVVWPASFS*LY*KVLSIMKGTMLRIRLPLQRHKDPEKLVIKE 464
           G+ N                                 G ++R+RLPL + K+PE  + KE
Sbjct: 98  GSSNH--------------------------------GNIIRLRLPLPKPKEPEASLTKE 125

Query: 465 QLCS------TSGGTEIIAQKMADISSNLTIKQPCLDSGRIEIAVQDSVKHAAVAKLSTR 626
           Q CS         G E    K    S  L    P L     E +V  S +H++  +L   
Sbjct: 126 QNCSERLPLPKDYGPEASLGKEQSSSMRL----PLLKHKEPEASV--SKEHSSSMRLPLL 179

Query: 627 KSITPQTDVQLRETLDNWVPSAVQFEQMDAENLEWLLDMPPSKHEAKRSKVSDGACCREN 806
           K   P+  V   ++    +P     E   + N E    +  SKH+   + +       +N
Sbjct: 180 KRKEPEASVSKEQSSSMQLPLLKHKEPEASLNKEKSCSI--SKHKEPETLLRK----EQN 233

Query: 807 PSLW 818
            S+W
Sbjct: 234 RSVW 237


Top