BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002834
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   548   e-153
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   523   e-146
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   513   e-143
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   511   e-142
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi...   484   e-134

>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  548 bits (1413), Expect = e-153
 Identities = 271/443 (61%), Positives = 345/443 (77%)
 Frame = -1

Query: 1346 LSVLQSSLDGSLESSLNKLDVTINEDFMVRVIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 1167
            L +LQSS DGSLES+L+   + ++E+F+V+V+E                           
Sbjct: 36   LHLLQSSDDGSLESTLDTFSLDLHEEFVVKVLETPHVLGENLIRFFKWA----------- 84

Query: 1166 XLKRYKLKTSTRVVDSLVRAFGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNEVISL 987
             +K+  L  +TR +D LV +  +  +R+++ YALWDLV+EIGE + G++S G LN++I+L
Sbjct: 85   -MKKQDLSVTTRAIDVLVSSICSSELRRKNAYALWDLVREIGEKNEGLVSVGSLNQLIAL 143

Query: 986  FWKLGKGKAALEVLNKFEDFVCEPNVDSYYLTIEALCRRSIYDWAWPVCEKMLNAGDLPD 807
              KLGKGKAALEV +K +DF C P+ ++YY TIEALCRRS YDWAW VCEKML+ G LPD
Sbjct: 144  LSKLGKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPD 203

Query: 806  SKKIGSIISSFCKGNKAKDAHLVYLMVKEKNKCPPRTVVNFLITSLCKEDDTVKLALELL 627
            S+KIG II  FCKG+KAKDAH VYL+ KEK+KCPP+  + FLI SLC++D TV LALE+L
Sbjct: 204  SEKIGKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLALEML 263

Query: 626  NDFSGDARKYAIKPFSCVIRGLCRIKDIEEAKKVLSKMIDEGPPPGSAVFNSIINGLSKA 447
            NDF G+A+KYAIKPFS VIRGLCRIKD++ AK++LSKMI EGPPPG+AVFN++I+G  K 
Sbjct: 264  NDFEGEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKG 323

Query: 446  GDLDEAMGLLKVMESRGLRPDVYTYSVLMSGYVKGGQMDEARSLLSEAKKKHEKLCPVTF 267
            GD+ EA+ ++K+MESRGL+PDVYTY+V++SGY  GGQM+EA  +LSEAKKKH KL PVT+
Sbjct: 324  GDMKEAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTY 383

Query: 266  HILTRGYCKLEEFDKAVELLNEMKDYGVYPNADEYNKMIQSLCNKALDWRTAEKLFEDMK 87
            H L RGYCKL++FDKA+ELL EM+ +GV PNADEYNK+IQSLC K+LDW TAEKLF +MK
Sbjct: 384  HALIRGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMK 443

Query: 86   EKGLYLNGITQSLIRAVKELEEE 18
            EKGLYLN IT+SLI AVKELE+E
Sbjct: 444  EKGLYLNSITRSLITAVKELEQE 466


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  523 bits (1348), Expect = e-146
 Identities = 269/445 (60%), Positives = 338/445 (75%)
 Frame = -1

Query: 1346 LSVLQSSLDGSLESSLNKLDVTINEDFMVRVIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 1167
            LS+LQSS D SLESSL+ +D+ ++EDF+V+V+E                           
Sbjct: 145  LSLLQSSTDASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWA----------- 193

Query: 1166 XLKRYKLKTSTRVVDSLVRAFGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNEVISL 987
             +K+  +  +TR+V  LVRA  + + RK+D YALWDLVK+IGE +  VL+  +LN++I+L
Sbjct: 194  -IKQPDINVTTRLVHPLVRAICSEL-RKKDAYALWDLVKDIGEEENTVLNVDLLNQLIAL 251

Query: 986  FWKLGKGKAALEVLNKFEDFVCEPNVDSYYLTIEALCRRSIYDWAWPVCEKMLNAGDLPD 807
            F KLGKGKAA EV NKF DF C P+ ++Y+ TIEALCRRSI+DWA  V EKML A  LPD
Sbjct: 252  FSKLGKGKAAFEVFNKFGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPD 311

Query: 806  SKKIGSIISSFCKGNKAKDAHLVYLMVKEKNKCPPRTVVNFLITSLCKEDDTVKLALELL 627
            ++KIG II  FCKG+KA DA+LVYL+ KEKNK PP+  VNFLI  LC++++TVKLALE+L
Sbjct: 312  TEKIGKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQKNETVKLALEML 371

Query: 626  NDFSGDARKYAIKPFSCVIRGLCRIKDIEEAKKVLSKMIDEGPPPGSAVFNSIINGLSKA 447
            + FSG  RKYAIKPFS VIR LCRIKD++ AK +LSKM+DEGPPPG+AVFNSIING SK 
Sbjct: 372  DAFSGPKRKYAIKPFSSVIRALCRIKDLDGAKMLLSKMVDEGPPPGNAVFNSIINGYSKC 431

Query: 446  GDLDEAMGLLKVMESRGLRPDVYTYSVLMSGYVKGGQMDEARSLLSEAKKKHEKLCPVTF 267
            GD+ EA+ + ++M  RGL+PD++TY+V+MSGY  GGQM+EA  +LSEAKKKH KL PV +
Sbjct: 432  GDMKEAIKMKQLMVRRGLKPDLFTYAVIMSGYASGGQMEEACKVLSEAKKKHSKLSPVMY 491

Query: 266  HILTRGYCKLEEFDKAVELLNEMKDYGVYPNADEYNKMIQSLCNKALDWRTAEKLFEDMK 87
            H + RGYCKLE+FDKA++LL EMK +GV  NADEYNK+IQSLC KALDW  AEKL E MK
Sbjct: 492  HTVIRGYCKLEQFDKALDLLAEMKTFGVQANADEYNKLIQSLCLKALDWERAEKLLEKMK 551

Query: 86   EKGLYLNGITQSLIRAVKELEEEDV 12
            E GL+LNGIT+ LIRAVKELE+E +
Sbjct: 552  EDGLHLNGITRGLIRAVKELEDEGI 576


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  513 bits (1322), Expect = e-143
 Identities = 265/445 (59%), Positives = 330/445 (74%), Gaps = 2/445 (0%)
 Frame = -1

Query: 1346 LSVLQSSLD--GSLESSLNKLDVTINEDFMVRVIEXXXXXXXXXXXXXXXXXXXXXXXXX 1173
            LS+LQSS D  GSLESS N + +++NE+F+VRV+E                         
Sbjct: 124  LSLLQSSGDAVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFFKWSW-------- 175

Query: 1172 XXXLKRYKLKTSTRVVDSLVRAFGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNEVI 993
                K      +TR VD+LVRA    + R++D Y+LWDLVKEIGE + GVL+ GILNE+I
Sbjct: 176  ----KNPGFSVTTRAVDALVRAVCQSV-RRKDTYSLWDLVKEIGEKENGVLNVGILNELI 230

Query: 992  SLFWKLGKGKAALEVLNKFEDFVCEPNVDSYYLTIEALCRRSIYDWAWPVCEKMLNAGDL 813
            + F KLGKGKA LEV N F ++                  RSI+DWA  VCEKMLNA  L
Sbjct: 231  AQFAKLGKGKAGLEVFNAFGEY-----------------GRSIFDWALSVCEKMLNASSL 273

Query: 812  PDSKKIGSIISSFCKGNKAKDAHLVYLMVKEKNKCPPRTVVNFLITSLCKEDDTVKLALE 633
            PDS+K+ +IIS FCKG K KDA+LVYL+ KEKNK PP+T VNFLI SLC+ED T+ +A+E
Sbjct: 274  PDSEKVWNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVE 333

Query: 632  LLNDFSGDARKYAIKPFSCVIRGLCRIKDIEEAKKVLSKMIDEGPPPGSAVFNSIINGLS 453
            +L+DFSG+  KYAIKP++ VIRGLCR KD++ AK++L KMI+ GPPPG+AVFN +INGLS
Sbjct: 334  MLDDFSGEECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLS 393

Query: 452  KAGDLDEAMGLLKVMESRGLRPDVYTYSVLMSGYVKGGQMDEARSLLSEAKKKHEKLCPV 273
            KAG+++EAM ++K+ME+RGL+PDVYTYSV+MSGY  GG M+EA  +LSEAK+ H KL PV
Sbjct: 394  KAGEMEEAMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPV 453

Query: 272  TFHILTRGYCKLEEFDKAVELLNEMKDYGVYPNADEYNKMIQSLCNKALDWRTAEKLFED 93
            T+H L RGYCKLE+FDKAVELL EMK++GV PN DEYNK+IQSLC KALDW+TAEKL E+
Sbjct: 454  TYHTLIRGYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEE 513

Query: 92   MKEKGLYLNGITQSLIRAVKELEEE 18
            MK+ GL+LNGIT+ LIRAVKELEEE
Sbjct: 514  MKQNGLHLNGITRGLIRAVKELEEE 538


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
            gi|449477884|ref|XP_004155152.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  511 bits (1317), Expect = e-142
 Identities = 256/445 (57%), Positives = 334/445 (75%)
 Frame = -1

Query: 1346 LSVLQSSLDGSLESSLNKLDVTINEDFMVRVIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 1167
            LS++QS++DGS ESSL+++ +T+NEDF+++VIE                           
Sbjct: 38   LSLIQSTVDGSFESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAVNSHP------ 91

Query: 1166 XLKRYKLKTSTRVVDSLVRAFGTGIIRKRDVYALWDLVKEIGENDVGVLSTGILNEVISL 987
                 + + ST VVD LVR     + R+R  Y+LW+L+KEIG     +L+  ILN++I+ 
Sbjct: 92   -----EFEVSTPVVDVLVRVVCANL-RQRVAYSLWELIKEIGGKQTSLLNAEILNQLIAF 145

Query: 986  FWKLGKGKAALEVLNKFEDFVCEPNVDSYYLTIEALCRRSIYDWAWPVCEKMLNAGDLPD 807
            F KLGKGKAALEVLN +E   C PN +SYY T+EALCRRS YD AWPVCEKML++G +P+
Sbjct: 146  FSKLGKGKAALEVLNSYEVLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPE 205

Query: 806  SKKIGSIISSFCKGNKAKDAHLVYLMVKEKNKCPPRTVVNFLITSLCKEDDTVKLALELL 627
            S ++G IIS FCKGNKAK+AH VYL+ KEK+   P+  +N LI SLC++D+TVKLALE+L
Sbjct: 206  SNRVGKIISLFCKGNKAKNAHSVYLLAKEKHVNLPQCYMNILIHSLCRDDETVKLALEML 265

Query: 626  NDFSGDARKYAIKPFSCVIRGLCRIKDIEEAKKVLSKMIDEGPPPGSAVFNSIINGLSKA 447
            NDFS   R+ AIKP+  VIR LCRIKD  +AK +L KMI EGPPPG+A FN++I G SKA
Sbjct: 266  NDFSTGERRRAIKPYMEVIRSLCRIKDTSKAKTLLQKMIAEGPPPGNAAFNAVICGYSKA 325

Query: 446  GDLDEAMGLLKVMESRGLRPDVYTYSVLMSGYVKGGQMDEARSLLSEAKKKHEKLCPVTF 267
            GDL+EAM L+K+MESRGL+PDVY+Y+ ++SGY KGGQM EA  +L EAKKKH KL  +T+
Sbjct: 326  GDLEEAMELIKLMESRGLKPDVYSYTAVISGYAKGGQMKEAYEVLDEAKKKHAKLSHITY 385

Query: 266  HILTRGYCKLEEFDKAVELLNEMKDYGVYPNADEYNKMIQSLCNKALDWRTAEKLFEDMK 87
            H L R +CKLEE+D A++LL+EMK++GV PN DEYNK+I+SLC KA+DWRT+E+LFE+MK
Sbjct: 386  HTLIRNHCKLEEYDSALKLLSEMKNFGVQPNVDEYNKLIRSLCLKAVDWRTSERLFEEMK 445

Query: 86   EKGLYLNGITQSLIRAVKELEEEDV 12
            E GL+LNGIT+ LIRAV+ELEEE++
Sbjct: 446  ENGLHLNGITRGLIRAVRELEEEEL 470


>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like isoform 1 [Glycine max]
            gi|356556346|ref|XP_003546487.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like isoform 2 [Glycine max]
          Length = 538

 Score =  484 bits (1246), Expect = e-134
 Identities = 243/446 (54%), Positives = 324/446 (72%), Gaps = 1/446 (0%)
 Frame = -1

Query: 1346 LSVLQSSLDGSLESSLNKLDVTINEDFMVRVIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 1167
            L +LQ+S DGSLES L+ +D+T+++  + ++ E                           
Sbjct: 96   LRLLQTSADGSLESCLDDIDLTLHQQLVTKITETPFVLSENLIRFFWWAW---------- 145

Query: 1166 XLKRYKLKTSTRVVDSLVRAFGTGIIRKRDV-YALWDLVKEIGENDVGVLSTGILNEVIS 990
                  L  +T +V+SLV A     +RK++V Y+LWDLVKEIGE + G+L+  ILNE+IS
Sbjct: 146  --SERSLGVTTPMVESLVLAICGNDVRKKEVVYSLWDLVKEIGEKESGILNVKILNELIS 203

Query: 989  LFWKLGKGKAALEVLNKFEDFVCEPNVDSYYLTIEALCRRSIYDWAWPVCEKMLNAGDLP 810
             F +LGKGKAALEV NKFE F C P+ D+YY TIEALCRR   DWA  VC+KM++A  LP
Sbjct: 204  SFLRLGKGKAALEVFNKFEAFHCVPDADTYYFTIEALCRRRALDWACGVCQKMVDAQILP 263

Query: 809  DSKKIGSIISSFCKGNKAKDAHLVYLMVKEKNKCPPRTVVNFLITSLCKEDDTVKLALEL 630
            D +K+G+I+S  CKG KAK+AH VY++  EK K PP  VV+FL+  LC ED+TVK ALE+
Sbjct: 264  DGEKVGAILSWLCKGKKAKEAHGVYVVATEKGKQPPVNVVSFLVVKLCGEDETVKFALEM 323

Query: 629  LNDFSGDARKYAIKPFSCVIRGLCRIKDIEEAKKVLSKMIDEGPPPGSAVFNSIINGLSK 450
            L D   + R+ AIKPF  V+R LCRIK++++AK+++ KMI++GPPPG+AVFN ++   SK
Sbjct: 324  LEDIPEEKRERAIKPFLAVVRALCRIKEVDKAKELVLKMIEDGPPPGNAVFNFVVTAYSK 383

Query: 449  AGDLDEAMGLLKVMESRGLRPDVYTYSVLMSGYVKGGQMDEARSLLSEAKKKHEKLCPVT 270
            AG++ +A+ ++++MESRGLRPDVYTY+VL S Y  GG+M+EA+ +L+E KKKH KL PV 
Sbjct: 384  AGEMGKAVEMMRLMESRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEVKKKHAKLGPVM 443

Query: 269  FHILTRGYCKLEEFDKAVELLNEMKDYGVYPNADEYNKMIQSLCNKALDWRTAEKLFEDM 90
            FH L RGYCKLE+FD+A++LL EMKDYGV+P+ DEY+K+IQSLC KALDW  AEKL E+M
Sbjct: 444  FHTLIRGYCKLEQFDEALKLLAEMKDYGVHPSVDEYDKLIQSLCLKALDWEMAEKLHEEM 503

Query: 89   KEKGLYLNGITQSLIRAVKELEEEDV 12
            KE GL+L GIT+ LIRAVKE+E+E V
Sbjct: 504  KESGLHLKGITRGLIRAVKEMEKEVV 529