BLASTX nr result

ID: Coptis24_contig00002828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002828
         (1893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23675.3| unnamed protein product [Vitis vinifera]              300   7e-79
ref|XP_002528824.1| conserved hypothetical protein [Ricinus comm...   299   2e-78
ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258...   295   3e-77
ref|XP_002311684.1| predicted protein [Populus trichocarpa] gi|2...   285   3e-74
ref|XP_002868293.1| hypothetical protein ARALYDRAFT_493476 [Arab...   283   1e-73

>emb|CBI23675.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  300 bits (769), Expect = 7e-79
 Identities = 216/562 (38%), Positives = 268/562 (47%), Gaps = 12/562 (2%)
 Frame = +1

Query: 244  KENVRWXXXXXXXXXXXXXXDFTRILSDRMSSKLSKGVVQNCGKLEKLQSQKGNLVGR-- 417
            +  VRW              DFTR+LSD    K S+  +    K+   +  +    GR  
Sbjct: 83   ESRVRWSTSSVPRGRSSSPSDFTRLLSDLRKDKGSRVSLDRREKVSGGERDRSVSRGRVS 142

Query: 418  ----SKFECGGIGVSDGKSKVEIFIEKNVENGVIGSRRSSTSKFRDNKNDEKGVNGYRMS 585
                 + E    G SD +S V+  +  N E   +G    S  KFR       G       
Sbjct: 143  RVSVDRCENSSGGESD-RSAVKPSVCSNSEGPKLGQNADSNVKFRGGSRVTDG------G 195

Query: 586  KSIEVFTDKNDEKVGS-GKSIGKHXXXXXXXXXXXXXXXXXXXXXXKDKCYVDQKARNAA 762
            +    F  K+D+ VG  GK +                                QK+ NA 
Sbjct: 196  REENFFVSKSDDVVGKVGKGVDSSCRGSG------------------------QKSLNAM 231

Query: 763  VGSESCKQKSGSDLESKVAVREGGLGTSVKVVKGKVLESQKESVDSEKHDEVRVGNKYSS 942
              SE  K+K  S+          G+G                          R GNKY S
Sbjct: 232  KISEMSKEKGASE----------GVGG-------------------------RSGNKYPS 256

Query: 943  KLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVKISGIEKAMVNVVEDK 1122
            KLHEKLAFLEGKVKRIASDI +TKEML+MNNPDTSK I+SDIQ KI GIEKAM +V  D 
Sbjct: 257  KLHEKLAFLEGKVKRIASDIKRTKEMLEMNNPDTSKVILSDIQDKICGIEKAMGHVASDS 316

Query: 1123 QKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLFPHHKXXXXXXXXXXX 1302
              N                        V  SV+ LN EELEARLFPHH+           
Sbjct: 317  DANA--------------------ADHVTSSVKGLNCEELEARLFPHHRLIRNRTSMKAS 356

Query: 1303 XXXXXXXXXXXXXXX---MVEDMVLSPIDENSIAQEFLESLNKKASKVSERNEHADMQFH 1473
                                E+  LSPIDEN IA EFL SL++  SKV+ R+ H   +F 
Sbjct: 357  LGSSQNFQSCNVESTGQLKPEEKALSPIDENPIAVEFLASLSEDNSKVTMRDRHVGSEFC 416

Query: 1474 EVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNRPETEIEEM--EDS 1647
            EV+E DG   SA+++  N++  +    E+ L              NR    I E   E++
Sbjct: 417  EVKEMDGATTSASQDCENRIMGKP-NVELILTTDETLDDEFADQENRQAMVISEETEEET 475

Query: 1648 SMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYNPPSVVSPNLWG 1827
             +  LNEIG+KT+TGGWFVSEGES+LLAHDDGSC+F+DI NSE KAEY PPS +SPN+W 
Sbjct: 476  CVYLLNEIGRKTTTGGWFVSEGESILLAHDDGSCSFHDIANSEEKAEYKPPSGLSPNVWR 535

Query: 1828 DCWLIRATDSDGCSGRYVVAAS 1893
            DCW+IRA  +DGCSGRYVVAAS
Sbjct: 536  DCWIIRAPGADGCSGRYVVAAS 557


>ref|XP_002528824.1| conserved hypothetical protein [Ricinus communis]
            gi|223531736|gb|EEF33558.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 919

 Score =  299 bits (766), Expect = 2e-78
 Identities = 186/391 (47%), Positives = 234/391 (59%), Gaps = 5/391 (1%)
 Frame = +1

Query: 736  VDQKARNAAVGSESCKQKSGSDLESKVAVREGGLGTSVKVVKGKVLESQKESVDSEKHDE 915
            +D K        + C   SGSD++   + +E    TS    K KV E+ KE    E+   
Sbjct: 195  LDSKVLKGVKLDKLCADNSGSDIKVD-SFKEPSDNTS----KIKVSENIKEKGLIEEGTG 249

Query: 916  VRVGNKYSSKLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVKISGIEK 1095
             ++G KY SKLHEKLAFLEGKVKRIASDI +TKEMLDMNNPD SK ++SDIQ KISGIEK
Sbjct: 250  NKIGVKYPSKLHEKLAFLEGKVKRIASDIKRTKEMLDMNNPDASKVVLSDIQDKISGIEK 309

Query: 1096 AMVNVVEDKQKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLFPHHK-- 1269
            A+ NV           E  +   + +  +K ++V  VK S++ LN+EELEARL PHHK  
Sbjct: 310  AIGNVGGGDSSRTGGNEGGEN--NVVGKNKDEKVDQVKGSIKGLNNEELEARLLPHHKLL 367

Query: 1270 --XXXXXXXXXXXXXXXXXXXXXXXXXXMVEDMVLSPIDENSIAQEFLESLNKKASKVSE 1443
                                         V++ +LSPI+EN IA EFL SLNK+ +KV+ 
Sbjct: 368  RNRTLLKEPSGSSQGCEDSIVPESTSESKVKEKLLSPIEENPIALEFLASLNKEDTKVTL 427

Query: 1444 RNEHADMQFHEVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNRPET 1623
            R    D +  EV+ETD  AA + +++ + ++      E+ L              NRP  
Sbjct: 428  RETTVDFENREVKETD-DAAPSGRQDSSSMSYGKREEEVVL-TTDETFDEFDDQENRPVL 485

Query: 1624 EI-EEMEDSSMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYNPP 1800
             I EE ED+ + Q+NEIG K+STGGWFVSEGESVLLAHDDGSCTFYDI N E KA Y PP
Sbjct: 486  VIGEETEDTCVYQVNEIGTKSSTGGWFVSEGESVLLAHDDGSCTFYDIANCEEKAVYKPP 545

Query: 1801 SVVSPNLWGDCWLIRATDSDGCSGRYVVAAS 1893
              VSPN+W DCW+IRA  +DGCSGRYV+AAS
Sbjct: 546  VGVSPNIWRDCWIIRAPSADGCSGRYVLAAS 576


>ref|XP_002281751.1| PREDICTED: uncharacterized protein LOC100258054 [Vitis vinifera]
          Length = 986

 Score =  295 bits (755), Expect = 3e-77
 Identities = 223/600 (37%), Positives = 287/600 (47%), Gaps = 50/600 (8%)
 Frame = +1

Query: 244  KENVRWXXXXXXXXXXXXXXDFTRILSDRMSSKLSKGVVQNCGKLEKLQSQKGNLVGR-- 417
            +  VRW              DFTR+LSD    K S+  +    K+   +  +    GR  
Sbjct: 83   ESRVRWSTSSVPRGRSSSPSDFTRLLSDLRKDKGSRVSLDRREKVSGGERDRSVSRGRVS 142

Query: 418  ----SKFECGGIGVSDGKSKVEIFIEKNVENGVIGSRRSSTSKFRDN--KNDEKGVNGYR 579
                 + E    G SD  +         V  GV GSR      FRD+  K +E+ VNG R
Sbjct: 143  RVSVDRCENSSGGESDRSAG-------KVGKGVNGSRVLKKG-FRDSSPKVNERSVNGLR 194

Query: 580  M------SKSIEVFTDKNDEKVGSGKSIGKHXXXXXXXXXXXXXXXXXXXXXXKDKCYVD 741
            +      S++++V   KN +                                  ++  + 
Sbjct: 195  IVPGCNDSENLDVNLKKNGDIA--------EKFELKLDERKKNSNGVVAIDNFMEEVNLR 246

Query: 742  QKARNAAVGSESCKQKSGSDLESKVAVREGG-------------------LGTSVKVVKG 864
              +   +V S S   K G + +S V  R G                    +G   K V  
Sbjct: 247  LNSVKPSVCSNSEGPKLGQNADSNVKFRGGSRVTDGGREENFFVSKSDDVVGKVGKGVDS 306

Query: 865  KVLESQKESVDSEKHDEV------------RVGNKYSSKLHEKLAFLEGKVKRIASDIMK 1008
                S ++S+++ K  E+            R GNKY SKLHEKLAFLEGKVKRIASDI +
Sbjct: 307  SCRGSGQKSLNAMKISEMSKEKGASEGVGGRSGNKYPSKLHEKLAFLEGKVKRIASDIKR 366

Query: 1009 TKEMLDMNNPDTSKTIISDIQVKISGIEKAMVNVVEDKQKNLDLPEVVDQRFSCLETSKS 1188
            TKEML+MNNPDTSK I+SDIQ KI GIEKAM +V  D   N                   
Sbjct: 367  TKEMLEMNNPDTSKVILSDIQDKICGIEKAMGHVASDSDANA------------------ 408

Query: 1189 KQVGGVKPSVRDLNSEELEARLFPHHKXXXXXXXXXXXXXXXXXXXXXXXXXX---MVED 1359
                 V  SV+ LN EELEARLFPHH+                               E+
Sbjct: 409  --ADHVTSSVKGLNCEELEARLFPHHRLIRNRTSMKASLGSSQNFQSCNVESTGQLKPEE 466

Query: 1360 MVLSPIDENSIAQEFLESLNKKASKVSERNEHADMQFHEVQETDGPAASAAKENYNKVTV 1539
              LSPIDEN IA EFL SL++  SKV+ R+ H   +F EV+E DG   SA+++  N++  
Sbjct: 467  KALSPIDENPIAVEFLASLSEDNSKVTMRDRHVGSEFCEVKEMDGATTSASQDCENRIMG 526

Query: 1540 RNIYAEIKLXXXXXXXXXXXXXXNRPETEIEEM--EDSSMDQLNEIGQKTSTGGWFVSEG 1713
            +    E+ L              NR    I E   E++ +  LNEIG+KT+TGGWFVSEG
Sbjct: 527  KP-NVELILTTDETLDDEFADQENRQAMVISEETEEETCVYLLNEIGRKTTTGGWFVSEG 585

Query: 1714 ESVLLAHDDGSCTFYDITNSEVKAEYNPPSVVSPNLWGDCWLIRATDSDGCSGRYVVAAS 1893
            ES+LLAHDDGSC+F+DI NSE KAEY PPS +SPN+W DCW+IRA  +DGCSGRYVVAAS
Sbjct: 586  ESILLAHDDGSCSFHDIANSEEKAEYKPPSGLSPNVWRDCWIIRAPGADGCSGRYVVAAS 645


>ref|XP_002311684.1| predicted protein [Populus trichocarpa] gi|222851504|gb|EEE89051.1|
            predicted protein [Populus trichocarpa]
          Length = 925

 Score =  285 bits (729), Expect = 3e-74
 Identities = 179/390 (45%), Positives = 225/390 (57%), Gaps = 4/390 (1%)
 Frame = +1

Query: 736  VDQKARNAAVGSESCKQKSGSDLESKVAVREGGLGTSVKVVKGKVLESQKESVDSEKHDE 915
            +D KA N     +  ++KS  + +S  + RE    +S K   GKVLE+ K+   S++   
Sbjct: 190  LDSKAANVCKFDKLYEEKSEPEFKSD-SFRESSEKSSAK---GKVLENLKDKGLSDEGSG 245

Query: 916  VRVGNKYSSKLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVKISGIEK 1095
             +VG KY SKLH+KLAFLEGKVKRIASDI KTKE+LDMNNPD SK I+SDIQ KISGIEK
Sbjct: 246  SKVGVKYPSKLHDKLAFLEGKVKRIASDIKKTKELLDMNNPDASKVILSDIQDKISGIEK 305

Query: 1096 AMVNVV---EDKQKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLFPHH 1266
            AM NV      +    D    +      +E S+S++V  VK SV+ LN+EELE RLFPHH
Sbjct: 306  AMGNVAVTGTSRSGGNDTGTAM-----VVEKSESEKVEDVKSSVKGLNTEELEERLFPHH 360

Query: 1267 KXXXXXXXXXXXXXXXXXXXXXXXXXXMVEDMVLSPIDENSIAQEFLESLNKKASKVSER 1446
            K                           V +    PI+EN  A E L SL K+  KV+ R
Sbjct: 361  KLLRNRTSLKAPIASCQSHESGCELK--VGEKFSGPIEENPKAFELLYSLGKEDKKVTMR 418

Query: 1447 NEHADMQFHEVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNRPETE 1626
            +    ++  EVQE    + S  +++ N     N+  E  +              N     
Sbjct: 419  DAKVGLESFEVQEMGDGSVSGKQDSSNMF---NLKCEDLVLTTDETLDEFDDQENGNTIM 475

Query: 1627 I-EEMEDSSMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYNPPS 1803
            I EE ED+ + ++ EIG K STGGWFVSEGES+LL HDDGSC+FYDI N E KA Y PP 
Sbjct: 476  IGEETEDTCVYEVKEIGTKNSTGGWFVSEGESILLTHDDGSCSFYDIANCEEKAVYKPPG 535

Query: 1804 VVSPNLWGDCWLIRATDSDGCSGRYVVAAS 1893
             VSPN+W DCW+IRA  +DGCSGRYVVAAS
Sbjct: 536  GVSPNIWRDCWMIRAPGADGCSGRYVVAAS 565


>ref|XP_002868293.1| hypothetical protein ARALYDRAFT_493476 [Arabidopsis lyrata subsp.
            lyrata] gi|297314129|gb|EFH44552.1| hypothetical protein
            ARALYDRAFT_493476 [Arabidopsis lyrata subsp. lyrata]
          Length = 896

 Score =  283 bits (724), Expect = 1e-73
 Identities = 173/393 (44%), Positives = 228/393 (58%), Gaps = 7/393 (1%)
 Frame = +1

Query: 736  VDQKARNAAVGSESCKQKSGSDLESKVAVREGGLGTSVKVVK------GKVLESQKESVD 897
            +     +A VGS    +KS   L+S   + + G GTSV + +      GK +E  KE   
Sbjct: 183  ISDPKEHALVGSG---EKSAVVLKSDCKIEKIGKGTSVALRRKSLDNGGKAMEVSKEIRG 239

Query: 898  SEKHDEVRVGNKYSSKLHEKLAFLEGKVKRIASDIMKTKEMLDMNNPDTSKTIISDIQVK 1077
            +E         KY SKLHEKLAFLEGKVK+IASDI KTK+MLD+NNPD+SK IISDIQ K
Sbjct: 240  NEGSSNSAA--KYPSKLHEKLAFLEGKVKKIASDIKKTKDMLDLNNPDSSKVIISDIQQK 297

Query: 1078 ISGIEKAMVNVVEDKQKNLDLPEVVDQRFSCLETSKSKQVGGVKPSVRDLNSEELEARLF 1257
            I+GIEK+M +V++  +KN                 K+ QV   K  V+ LN EELE RLF
Sbjct: 298  ITGIEKSMSHVIDGPEKN-----------------KTTQVTKAKTLVKGLNKEELEDRLF 340

Query: 1258 PHHKXXXXXXXXXXXXXXXXXXXXXXXXXXM-VEDMVLSPIDENSIAQEFLESLNKKASK 1434
            PH +                          + VE+   +P++EN IA EFL SL+K+  K
Sbjct: 341  PHQRLLRSRTQSKTSSHVSKGHDSVEPNKAVNVEEKPSAPVEENVIALEFLASLDKE--K 398

Query: 1435 VSERNEHADMQFHEVQETDGPAASAAKENYNKVTVRNIYAEIKLXXXXXXXXXXXXXXNR 1614
            V+  ++   ++  EVQE D    S   +    V + +   EI                NR
Sbjct: 399  VTFMSDQNALENLEVQEMDTEEPSKENDVSKDVNLTSNLNEI--LRANEALEEIDDEENR 456

Query: 1615 PETEIEEMEDSSMDQLNEIGQKTSTGGWFVSEGESVLLAHDDGSCTFYDITNSEVKAEYN 1794
             E E+EE+++  M QLN+IG +TSTGGWFVSEGE+V+LAHDDGSC++YD+ NSEVK+ Y+
Sbjct: 457  EEMELEEIDEGCMYQLNDIGSRTSTGGWFVSEGEAVILAHDDGSCSYYDVANSEVKSVYS 516

Query: 1795 PPSVVSPNLWGDCWLIRATDSDGCSGRYVVAAS 1893
            PP  +SPN W DCW++RA  +DGCSGRYVVAAS
Sbjct: 517  PPDGISPNTWRDCWVVRAPGADGCSGRYVVAAS 549


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