BLASTX nr result

ID: Coptis24_contig00002821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002821
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518184.1| glutathione s-transferase, putative [Ricinus...    56   3e-06
ref|XP_002301833.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002518184.1| glutathione s-transferase, putative [Ricinus communis]
           gi|453056252|pdb|4J2F|A Chain A, Crystal Structure Of A
           Glutathione Transferase Family Member From Ricinus
           Communis, Target Efi-501866 gi|223542780|gb|EEF44317.1|
           glutathione s-transferase, putative [Ricinus communis]
          Length = 223

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = +3

Query: 3   PNLYQWKQNFKEVPIIKENLPEHDQALAYFKRIRDRIL 116
           P L+ W +NFKE PIIKENLP+ DQ  A+FKR R+ IL
Sbjct: 183 PRLHAWTENFKEAPIIKENLPDRDQMTAFFKRRREMIL 220


>ref|XP_002301833.1| predicted protein [Populus trichocarpa] gi|222843559|gb|EEE81106.1|
           predicted protein [Populus trichocarpa]
           gi|283136102|gb|ADB11370.1| tau class glutathione
           transferase GSTU44 [Populus trichocarpa]
          Length = 232

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +3

Query: 3   PNLYQWKQNFKEVPIIKENLPEHDQALAYFKRIRDRIL 116
           P L+ W QNFKEV +IKENLP++D+ LAYFK +R   +
Sbjct: 180 PRLHLWTQNFKEVAVIKENLPDYDEMLAYFKSLRQMFM 217


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