BLASTX nr result

ID: Coptis24_contig00002805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002805
         (1973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528996.1| conserved hypothetical protein [Ricinus comm...   472   e-130
ref|XP_002867666.1| hypothetical protein ARALYDRAFT_914153 [Arab...   462   e-127
ref|XP_002263809.1| PREDICTED: uncharacterized protein At5g49945...   458   e-126
ref|NP_194164.1| uncharacterized protein [Arabidopsis thaliana] ...   454   e-125
emb|CAN63262.1| hypothetical protein VITISV_036939 [Vitis vinifera]   453   e-125

>ref|XP_002528996.1| conserved hypothetical protein [Ricinus communis]
            gi|223531536|gb|EEF33366.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 468

 Score =  472 bits (1215), Expect = e-130
 Identities = 243/376 (64%), Positives = 279/376 (74%), Gaps = 3/376 (0%)
 Frame = +1

Query: 472  DFWDEDEFEGVPILEKIQETPDVIIPI--KTEVAPPVRSP-PKNIGSFTVEIICVSFLIT 642
            D+WDEDEFEG+PI +   ETP V  P   K + A P+ S       S+ +EI+C+SFLI 
Sbjct: 93   DYWDEDEFEGLPINQSPPETPKVTEPATDKNQSADPIVSQIATKKQSYMIEIVCISFLIC 152

Query: 643  FIINYFTGKKENENIALSWASRFATKDSIFDKNFSLLGTGDGKDTPLLLKEGQNVFKFYA 822
            FIINYFTGK+ENENIALSWA++FATKDSIF+KNFSLLG GD  D+PLLLKEGQNVFKFYA
Sbjct: 153  FIINYFTGKRENENIALSWAAKFATKDSIFEKNFSLLGVGDKDDSPLLLKEGQNVFKFYA 212

Query: 823  SGRRFCQGMLATMELKSRHDLISRLYNMVVPCKDEITFEVYMNDDGMDQVVFXXXXXXXX 1002
            SGRR+CQG+LAT+ELKSRHDLISR+YNM+VPCKDEI+FEVYMNDD MD VVF        
Sbjct: 213  SGRRYCQGLLATIELKSRHDLISRVYNMIVPCKDEISFEVYMNDDAMDHVVFAVAKKKAA 272

Query: 1003 XVMHKELRDLQTYGSLISSGPSNRKWVAEELMVISESKEVAGDIINEAVLDQVFGDKAFP 1182
              M KE+RDLQ +  +++  PS RKWV +EL VI+ESKEVA D+I EAVL+QVFG+KAF 
Sbjct: 273  KGMQKEIRDLQRFAGIVAQPPSGRKWVPDELAVITESKEVASDLITEAVLEQVFGEKAFE 332

Query: 1183 KFGKEFISMHFSDQYMGSHRKMLLLKFALPDAKTMADMTRLVALVPYYIDLIGRYKLSPQ 1362
            K GK FISMHFSDQ+ G+H+KMLL KFALPDA  M DMTRLVALVPYYIDLIGRYKLS Q
Sbjct: 333  KHGKGFISMHFSDQHPGTHKKMLLFKFALPDANNMTDMTRLVALVPYYIDLIGRYKLSSQ 392

Query: 1363 ARSKTDVARAKVAQEVYKELQNXXXXXXXXXXXXXXXXXXXXXXXLSAEAIRKKEAKDRA 1542
            ARSKTD AR+K AQE YKELQN                       LSAEAIRK+EAK+RA
Sbjct: 393  ARSKTDAARSKAAQEAYKELQNARQEALQRKKAERRKMLEEAEAKLSAEAIRKREAKERA 452

Query: 1543 XXXXXXXXXXXXTRGH 1590
                        TR H
Sbjct: 453  RQMKKAMPKVKMTRAH 468


>ref|XP_002867666.1| hypothetical protein ARALYDRAFT_914153 [Arabidopsis lyrata subsp.
            lyrata] gi|297313502|gb|EFH43925.1| hypothetical protein
            ARALYDRAFT_914153 [Arabidopsis lyrata subsp. lyrata]
          Length = 476

 Score =  462 bits (1188), Expect = e-127
 Identities = 257/478 (53%), Positives = 303/478 (63%), Gaps = 19/478 (3%)
 Frame = +1

Query: 214  LLSIFS--LLTQQLTRHSVLASSADFEGFGXXXXXXXXXXXXXXX------LITNLPFRS 369
            L+S+FS  L+      H VLASS+DFEGF                      L  +     
Sbjct: 3    LVSLFSIALIAFLCLHHRVLASSSDFEGFDAEDDDVLDDSTELHHSLRPPLLTQSESTVL 62

Query: 370  PLPPPTTNLETDHGXXXXXXXXXXXXXXXXXXXLDFWDEDEFEGVPILEKIQETP---DV 540
             L PP+   ++D                      D+WDEDEFEG+P  EK  E+P   D 
Sbjct: 63   DLDPPS---DSDSTTPASKSDPPTQTVKPSSISFDYWDEDEFEGLPEDEKSMESPVISDD 119

Query: 541  IIPIKTEVAPPVRSP--------PKNIGSFTVEIICVSFLITFIINYFTGKKENENIALS 696
              P      P + S         PK   S+TVEI+CVS LI + INYFTGK+ENEN+AL+
Sbjct: 120  ASPAADPQTPDLESASETADTDIPKKKQSYTVEIVCVSILIGYAINYFTGKRENENLALA 179

Query: 697  WASRFATKDSIFDKNFSLLGTGDGKDTPLLLKEGQNVFKFYASGRRFCQGMLATMELKSR 876
            WAS+F  KD+IF+KNFSLLG G+G+D+PLLLKE  NVFKFYASGRR+C G+LAT+ELKSR
Sbjct: 180  WASKFGLKDTIFEKNFSLLGVGEGEDSPLLLKEATNVFKFYASGRRYCHGLLATLELKSR 239

Query: 877  HDLISRLYNMVVPCKDEITFEVYMNDDGMDQVVFXXXXXXXXXVMHKELRDLQTYGSLIS 1056
            HDLISRL+N VVPCKDEI+FEVYMND+ MD +VF          MHKELRDLQ +G ++ 
Sbjct: 240  HDLISRLFNSVVPCKDEISFEVYMNDEAMDHIVFAMARKKAAKTMHKELRDLQRFGGMVP 299

Query: 1057 SGPSNRKWVAEELMVISESKEVAGDIINEAVLDQVFGDKAFPKFGKEFISMHFSDQYMGS 1236
            S P  RKWV EEL V+SESKEVAGD+I + VLDQVFGDK+F KFGK FISMHFSDQ+ G 
Sbjct: 300  S-PGGRKWVTEELAVVSESKEVAGDMITDVVLDQVFGDKSFEKFGKYFISMHFSDQHPGK 358

Query: 1237 HRKMLLLKFALPDAKTMADMTRLVALVPYYIDLIGRYKLSPQARSKTDVARAKVAQEVYK 1416
            HRKMLL KFALPDAK M DM RL+AL+PYYIDLIGRYKLS QAR+KTD AR K AQE YK
Sbjct: 359  HRKMLLFKFALPDAKHMDDMVRLIALIPYYIDLIGRYKLSSQARNKTDGARQKAAQEAYK 418

Query: 1417 ELQNXXXXXXXXXXXXXXXXXXXXXXXLSAEAIRKKEAKDRAXXXXXXXXXXXXTRGH 1590
            EL+N                       LSAEA+RKKEAK+RA            +RGH
Sbjct: 419  ELENVRQEALQRKKAEKKKILEEAQAKLSAEALRKKEAKERARQMKKSMPKVKMSRGH 476


>ref|XP_002263809.1| PREDICTED: uncharacterized protein At5g49945 [Vitis vinifera]
          Length = 478

 Score =  458 bits (1178), Expect = e-126
 Identities = 244/380 (64%), Positives = 275/380 (72%), Gaps = 6/380 (1%)
 Frame = +1

Query: 469  LDFWDEDEFEGVPILEKIQETPDV---IIPIKTEVAPPVRSPPKNIG---SFTVEIICVS 630
            LD+WDEDEFEG+P  E+  E P +   +IP      P   + P+      S+ VEI+C+S
Sbjct: 100  LDYWDEDEFEGLPE-EQSPEPPKLTENVIPKDPSSDPNKAAKPQKTAVSRSYVVEIVCIS 158

Query: 631  FLITFIINYFTGKKENENIALSWASRFATKDSIFDKNFSLLGTGDGKDTPLLLKEGQNVF 810
            FLI F INYFTGK+ENENIAL+WA++FATKDSIFDKNFSLLG GDG DTPLLLKEGQNVF
Sbjct: 159  FLIMFTINYFTGKRENENIALAWAAKFATKDSIFDKNFSLLGVGDGDDTPLLLKEGQNVF 218

Query: 811  KFYASGRRFCQGMLATMELKSRHDLISRLYNMVVPCKDEITFEVYMNDDGMDQVVFXXXX 990
            KFYASGRR+C G+LATMEL+SRHDLISRL N+VV  +DEI+FEVYMN++ MDQVVF    
Sbjct: 219  KFYASGRRYCSGLLATMELQSRHDLISRLCNLVVRGRDEISFEVYMNEEAMDQVVFALAR 278

Query: 991  XXXXXVMHKELRDLQTYGSLISSGPSNRKWVAEELMVISESKEVAGDIINEAVLDQVFGD 1170
                  M KE RDLQ Y SL+S     RKWV EEL VISESKEVAGD+I EAVL+QVFG+
Sbjct: 279  RKAAKGMQKEERDLQRYASLLSGPTGGRKWVVEELAVISESKEVAGDLITEAVLEQVFGE 338

Query: 1171 KAFPKFGKEFISMHFSDQYMGSHRKMLLLKFALPDAKTMADMTRLVALVPYYIDLIGRYK 1350
            KAF KFGK FISMHFSDQ +G+H+KMLL KFALPDAK MA MTRLVAL+PYYIDLIGRYK
Sbjct: 339  KAFEKFGKGFISMHFSDQQLGTHKKMLLFKFALPDAKNMAHMTRLVALIPYYIDLIGRYK 398

Query: 1351 LSPQARSKTDVARAKVAQEVYKELQNXXXXXXXXXXXXXXXXXXXXXXXLSAEAIRKKEA 1530
            LS QARSKTD AR+K AQE YKE QN                       LSAE IRKKEA
Sbjct: 399  LSSQARSKTDSARSKAAQEAYKEQQNARQEALQKRKAERKKMMEEAEAKLSAEIIRKKEA 458

Query: 1531 KDRAXXXXXXXXXXXXTRGH 1590
            KDRA            TR H
Sbjct: 459  KDRARQAKKAMPRVRMTRAH 478


>ref|NP_194164.1| uncharacterized protein [Arabidopsis thaliana]
            gi|5051775|emb|CAB45068.1| putative protein [Arabidopsis
            thaliana] gi|7269283|emb|CAB79343.1| putative protein
            [Arabidopsis thaliana] gi|58652054|gb|AAW80852.1|
            At4g24330 [Arabidopsis thaliana]
            gi|332659490|gb|AEE84890.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 478

 Score =  454 bits (1167), Expect = e-125
 Identities = 233/384 (60%), Positives = 275/384 (71%), Gaps = 11/384 (2%)
 Frame = +1

Query: 472  DFWDEDEFEGVPILEKIQETP----DVIIP-------IKTEVAPPVRSPPKNIGSFTVEI 618
            D+WDEDEFEG+P  EK  E+P    D   P       +++    P    PK + S+TVEI
Sbjct: 96   DYWDEDEFEGLPEDEKSTESPVFSDDASSPADPQTPDLESASETPDTDIPKKMQSYTVEI 155

Query: 619  ICVSFLITFIINYFTGKKENENIALSWASRFATKDSIFDKNFSLLGTGDGKDTPLLLKEG 798
            +CVS LI + INYFTGK+ENEN+AL+WAS+F  KD+IF+KNFSLLG G+G+D+PLLLKE 
Sbjct: 156  VCVSILIGYAINYFTGKRENENLALAWASKFGLKDTIFEKNFSLLGVGEGEDSPLLLKEA 215

Query: 799  QNVFKFYASGRRFCQGMLATMELKSRHDLISRLYNMVVPCKDEITFEVYMNDDGMDQVVF 978
             NVFKFYASGRR+C G+LAT+ELKSRHDLISRL+N VVPCKDEI+FEVYMND+ MD +VF
Sbjct: 216  TNVFKFYASGRRYCHGLLATLELKSRHDLISRLFNSVVPCKDEISFEVYMNDEAMDHIVF 275

Query: 979  XXXXXXXXXVMHKELRDLQTYGSLISSGPSNRKWVAEELMVISESKEVAGDIINEAVLDQ 1158
                      MHKELRDLQ +G ++ S P  RKWV EEL V+SESKEVAGD+I + VLDQ
Sbjct: 276  AMARKKAAKTMHKELRDLQRFGGMVPS-PGGRKWVTEELAVVSESKEVAGDMITDVVLDQ 334

Query: 1159 VFGDKAFPKFGKEFISMHFSDQYMGSHRKMLLLKFALPDAKTMADMTRLVALVPYYIDLI 1338
            VFGDK+F KFGK FISMHFSDQ+ G HRKMLL KFALPD K M DM RL+AL+PYYIDLI
Sbjct: 335  VFGDKSFEKFGKYFISMHFSDQHPGKHRKMLLFKFALPDIKHMDDMVRLIALIPYYIDLI 394

Query: 1339 GRYKLSPQARSKTDVARAKVAQEVYKELQNXXXXXXXXXXXXXXXXXXXXXXXLSAEAIR 1518
            GRYKLS QAR+KTD AR K AQE YKEL+N                       LS+EA+R
Sbjct: 395  GRYKLSSQARNKTDGARQKAAQEAYKELENVRQEALQRKKAEKKKILEEAQAKLSSEALR 454

Query: 1519 KKEAKDRAXXXXXXXXXXXXTRGH 1590
            KKEAK+RA            +RGH
Sbjct: 455  KKEAKERARQMKKSMPKVKMSRGH 478


>emb|CAN63262.1| hypothetical protein VITISV_036939 [Vitis vinifera]
          Length = 478

 Score =  453 bits (1165), Expect = e-125
 Identities = 241/380 (63%), Positives = 273/380 (71%), Gaps = 6/380 (1%)
 Frame = +1

Query: 469  LDFWDEDEFEGVPILEKIQETPDV---IIPIKTEVAPPVRSPPKNIG---SFTVEIICVS 630
            LD+WDEDEFEG+P  E+  E P +   + P      P   + P+      S+ VEI+C+S
Sbjct: 100  LDYWDEDEFEGLPE-EQSPEPPKLTENVTPKDPSSDPNKAAKPQKTAVSRSYXVEIVCIS 158

Query: 631  FLITFIINYFTGKKENENIALSWASRFATKDSIFDKNFSLLGTGDGKDTPLLLKEGQNVF 810
            FLI F INYFTGK+ENENIAL+WA++FATKDSIFDKNFSLLG GDG DTPLLLKEGQNVF
Sbjct: 159  FLIMFTINYFTGKRENENIALAWAAKFATKDSIFDKNFSLLGVGDGDDTPLLLKEGQNVF 218

Query: 811  KFYASGRRFCQGMLATMELKSRHDLISRLYNMVVPCKDEITFEVYMNDDGMDQVVFXXXX 990
            KFYASGRR+C G+LATMEL+SRHDLISRL N+VV  +DEI+FEVYMN++ MDQVVF    
Sbjct: 219  KFYASGRRYCSGLLATMELQSRHDLISRLCNLVVRGRDEISFEVYMNEEAMDQVVFALAR 278

Query: 991  XXXXXVMHKELRDLQTYGSLISSGPSNRKWVAEELMVISESKEVAGDIINEAVLDQVFGD 1170
                  M KE RDLQ Y SL+S     R WV EEL VISESKEVAGD+I EAVL+QVFG+
Sbjct: 279  RKAAKGMQKEERDLQRYASLLSGPTGGRXWVVEELAVISESKEVAGDLITEAVLEQVFGE 338

Query: 1171 KAFPKFGKEFISMHFSDQYMGSHRKMLLLKFALPDAKTMADMTRLVALVPYYIDLIGRYK 1350
            KAF K+GK FISMHFSDQ +G+H+KMLL KFALPDAK M DMTRLVAL+PYYIDLIGRYK
Sbjct: 339  KAFEKYGKGFISMHFSDQQLGTHKKMLLFKFALPDAKNMXDMTRLVALIPYYIDLIGRYK 398

Query: 1351 LSPQARSKTDVARAKVAQEVYKELQNXXXXXXXXXXXXXXXXXXXXXXXLSAEAIRKKEA 1530
            LS QARSKTD AR+K AQE YKE QN                       LSAE IRKKEA
Sbjct: 399  LSSQARSKTDSARSKAAQEAYKEQQNARQEALQKRKAERKKMMEEAEAKLSAEIIRKKEA 458

Query: 1531 KDRAXXXXXXXXXXXXTRGH 1590
            KDRA            TR H
Sbjct: 459  KDRARQAKKAMPRVRMTRAH 478


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