BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002795
         (1900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...   297   8e-78
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...   254   6e-65
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...   251   5e-64
emb|CBI75525.1| PPR repeat domain containing protein [Triticum a...   247   7e-63
ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containi...   244   4e-62

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial-like [Vitis vinifera]
            gi|297742067|emb|CBI33854.3| unnamed protein product
            [Vitis vinifera]
          Length = 767

 Score =  297 bits (760), Expect = 8e-78
 Identities = 153/333 (45%), Positives = 217/333 (65%), Gaps = 25/333 (7%)
 Frame = +2

Query: 2    KEIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKV 181
            +++GA GY++D+T+YSILI+ +C  GDLD+A K+M EM+ NNL PD   + +++HG+CK+
Sbjct: 419  RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 182  GRLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTY 361
            G    AL  F   L+GG+ P++ TC VI+D  C++G VEEA+  M+EMQ QGI P+LFTY
Sbjct: 479  GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 362  NAIINGLCKELKSNSAQEIYQLILER------------------------TSKLCKRMLK 469
            NA+IN LCKE KS  A E++ L+L+R                           L  RMLK
Sbjct: 539  NAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLK 598

Query: 470  DGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKT 649
             G TP++V YTILI+  C   RM EA  +FK+M   G+ PDKI++T++IAG+CRIGD + 
Sbjct: 599  IGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRK 658

Query: 650  ALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRI-IKSDTPNVVTYTALMA 826
            A   + EM +RG  P + TYT LV GYCK  ++D A  L D +  K  TP+VVTY  L+A
Sbjct: 659  AWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIA 718

Query: 827  GYHRTGDLEIALQLYNKMEEKGIQPDDITCLVL 925
             + R G+L+ AL++ N+M+E G+ PD +T ++L
Sbjct: 719  AHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  175 bits (444), Expect = 3e-41
 Identities = 94/320 (29%), Positives = 173/320 (54%), Gaps = 25/320 (7%)
 Frame = +2

Query: 41   SYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLFKQG 220
            +YS  I   C++G +++A   +  ++  N   +VY Y  ++HG CK G LDEAL + ++ 
Sbjct: 292  TYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEM 351

Query: 221  LKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCKELKS 400
               G+ P+V T ++++ GFCK+G VE+ +  ++EM+   + P L +Y+++ +GLCK+  S
Sbjct: 352  KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLS 411

Query: 401  NSAQEIYQLI------------------------LERTSKLCKRMLKDGKTPNVVTYTIL 508
            + + +I++ +                        L+   KL + M+++   P+   +  L
Sbjct: 412  DISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471

Query: 509  ISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGI 688
            +  FC  G    AL+ F  M+  GI+P       II  +CR G  + AL+   EM+ +GI
Sbjct: 472  VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531

Query: 689  TPDIFTYTCLVHGYCKSKQMDEARNLFDRIIKSDT-PNVVTYTALMAGYHRTGDLEIALQ 865
             P++FTY  +++  CK ++ + A  LF  ++K +  P+VV Y+ L+ G+ +  + + AL 
Sbjct: 532  FPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALM 591

Query: 866  LYNKMEEKGIQPDDITCLVL 925
            LY +M + G+ PD +   +L
Sbjct: 592  LYARMLKIGVTPDMVAYTIL 611



 Score =  167 bits (422), Expect = 1e-38
 Identities = 93/329 (28%), Positives = 172/329 (52%), Gaps = 25/329 (7%)
 Frame = +2

Query: 2    KEIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKV 181
            +E+ + G   D  +YSILI  +CK GD++    ++ EM  +N+ P +  Y+++ HG CK 
Sbjct: 349  EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK 408

Query: 182  GRLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTY 361
               D +L +F+     G + +    ++++ GFC +G ++ A   M+EM    + PD   +
Sbjct: 409  RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468

Query: 362  NAIINGLCKELKSNSAQEIYQLIL------------------------ERTSKLCKRMLK 469
             ++++G CK     +A E + ++L                        E    L   M  
Sbjct: 469  ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528

Query: 470  DGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKT 649
             G  PN+ TY  +I+  C   +   AL++F  M+ + ++P  + ++ +I G+ +  +++ 
Sbjct: 529  QGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588

Query: 650  ALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRIIKSD-TPNVVTYTALMA 826
            AL  Y  M K G+TPD+  YT L++  C   +M EA NLF ++ ++  TP+ ++YT+++A
Sbjct: 589  ALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIA 648

Query: 827  GYHRTGDLEIALQLYNKMEEKGIQPDDIT 913
            G+ R GD+  A  L+N+M ++G  P  +T
Sbjct: 649  GFCRIGDMRKAWALFNEMLQRGHLPTVVT 677



 Score =  135 bits (341), Expect = 3e-29
 Identities = 83/302 (27%), Positives = 154/302 (50%), Gaps = 7/302 (2%)
 Frame = +2

Query: 41   SYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCK--VGRLD----EAL 202
            S + L++C  +    +    +  EM      P+V+ YT +++ YCK   G  D    +A 
Sbjct: 216  SCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQAT 275

Query: 203  GLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGL 382
             + ++  + G  P VVT +  + G C+ G VE A+ F+  +     + +++ YNAII+GL
Sbjct: 276  EILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335

Query: 383  CKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFK 562
            CK+ +           L+   K+ + M   G +P+V TY+ILI  FC  G + + L + +
Sbjct: 336  CKKGE-----------LDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIE 384

Query: 563  EMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSK 742
            EM    + P  ++++++  G C+   +  +LD +R++   G   D   Y+ L+ G+C   
Sbjct: 385  EMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQG 444

Query: 743  QMDEARNLFDRIIKSD-TPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITCL 919
             +D A  L + +++++  P+   + +L+ G+ + G    AL+ +N M E GI P   TC 
Sbjct: 445  DLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCN 504

Query: 920  VL 925
            V+
Sbjct: 505  VI 506



 Score =  108 bits (271), Expect = 4e-21
 Identities = 67/256 (26%), Positives = 128/256 (50%), Gaps = 1/256 (0%)
 Frame = +2

Query: 188 LDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNA 367
           L+ A+ +F Q  K G+  +  +C  ++    +    E      +EM+  G  P++FTY  
Sbjct: 195 LENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTI 254

Query: 368 IINGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEA 547
           ++N  C   K N  +    +   + +++ + M ++G++P VVTY+  I   C  G +  A
Sbjct: 255 MMNFYC---KGNFGEA--DIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESA 309

Query: 548 LKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHG 727
           L   + +I    + +   + AII G C+ G+   AL    EM+  GI+PD++TY+ L+HG
Sbjct: 310 LDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHG 369

Query: 728 YCKSKQMDEARNLFDRIIKSD-TPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPD 904
           +CK   +++   L + +  S+  P++V+Y++L  G  +    +I+L ++  +   G + D
Sbjct: 370 FCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYD 429

Query: 905 DITCLVLGLGTVQDDD 952
                +L  G     D
Sbjct: 430 QTAYSILIKGFCMQGD 445



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
 Frame = +2

Query: 428 ILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFT 607
           +LE    +  +  K G   +  +   L+       R      +F+EM   G  P+   +T
Sbjct: 194 MLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYT 253

Query: 608 AIIAGYCRIG------DTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLF 769
            ++  YC+        DT+ A +   EME+ G +P + TY+  ++G C+   ++ A +  
Sbjct: 254 IMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFV 313

Query: 770 DRIIKSD-TPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITCLVLGLGTVQD 946
             +I ++   NV  Y A++ G  + G+L+ AL++  +M+  GI PD  T  +L  G  + 
Sbjct: 314 RSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQ 373

Query: 947 DD 952
            D
Sbjct: 374 GD 375


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score =  254 bits (649), Expect = 6e-65
 Identities = 137/347 (39%), Positives = 214/347 (61%), Gaps = 28/347 (8%)
 Frame = +2

Query: 8    IGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGR 187
            +GA GY+HD  SY+ LI  +    D+ +ACK+++EM  N   P+ + +  ++HG+CK  R
Sbjct: 419  LGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQR 478

Query: 188  LDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNA 367
            LD+AL +F   LK G++ N+ TC ++ D F ++G   EA+  ++E+QD GI+P+ +TYN 
Sbjct: 479  LDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNI 538

Query: 368  IINGLCKELKSNSAQEIYQLILERTSKLC------------------------KRMLKDG 475
            +I  LCKE K+  A E+  ++L+     C                         +MLK G
Sbjct: 539  VIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVG 598

Query: 476  KTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTAL 655
              P++VTYT+LI+ F    +M EA  +FKEMI KG+VPD+I FT IIAG+C++GD K+A 
Sbjct: 599  IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAW 658

Query: 656  DFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRIIKSD-TPNVVTYTALMAGY 832
              Y EM + G +P++ TYTCL+ GY K K+MD+A  LF+++ + + TP+ +TYTAL+ GY
Sbjct: 659  ALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGY 718

Query: 833  HRTGDLEIALQLYNKMEEKGIQPDDITCLVLG--LGTVQDDD-RGER 964
               G  +   +++N+M+E G+ P+      LG  LG V+++  +GER
Sbjct: 719  QSLGYSDRVREMFNEMKENGVFPNYTAYATLGLHLGVVREEPAKGER 765



 Score =  157 bits (397), Expect = 9e-36
 Identities = 95/334 (28%), Positives = 168/334 (50%), Gaps = 27/334 (8%)
 Frame = +2

Query: 41   SYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLFKQG 220
            SYSILI+  CK G ++ A  ++ EM+ +N+ P +  Y+++  G CK G  + +L +F   
Sbjct: 360  SYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNL 419

Query: 221  LKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCKELKS 400
               G + +V++   +++GF  +  +  A   + EM+  G +P+ FT+N +I+G CK  + 
Sbjct: 420  GAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRL 479

Query: 401  NSAQEIYQLILE------------------------RTSKLCKRMLKDGKTPNVVTYTIL 508
            + A E++ ++L+                           KL   +   G  PN  TY I+
Sbjct: 480  DKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIV 539

Query: 509  ISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGI 688
            I   C   +  +A +V   M+   + P  I +  +I GY +  +   AL  Y +M K GI
Sbjct: 540  IKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGI 599

Query: 689  TPDIFTYTCLVHGYCKSKQMDEARNLFDRIIKSD-TPNVVTYTALMAGYHRTGDLEIALQ 865
             P I TYT L++ +    +M EA  LF  +IK    P+ + +T ++AG+ + GD++ A  
Sbjct: 600  PPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWA 659

Query: 866  LYNKMEEKGIQPDDI--TCLVLGLGTVQDDDRGE 961
            LY +M + G  P+ +  TCL+ G   ++  D+ +
Sbjct: 660  LYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKAD 693



 Score =  139 bits (350), Expect = 3e-30
 Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 62/364 (17%)
 Frame = +2

Query: 41   SYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLFKQG 220
            +Y   I   C+ G ++ A +++ ++   N   + Y Y  V+H +C+ G L EA  L +  
Sbjct: 290  TYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDM 349

Query: 221  LKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCK---- 388
               G+ P   + ++++DG CKKG VE+A+  ++EM    + P L TY+++ +GLCK    
Sbjct: 350  RSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLT 409

Query: 389  ----ELKSNSAQEIYQ------------LILER----TSKLCKRMLKDGKTPNVVTYTIL 508
                 +  N   E Y+             +L+R      KL   M  +G  PN  T+  L
Sbjct: 410  EISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRL 469

Query: 509  ISAFC--------------------------CG---------GRMYEALKVFKEMIVKGI 583
            I  FC                          C          G  +EALK+  E+   GI
Sbjct: 470  IHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGI 529

Query: 584  VPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARN 763
            VP+   +  +I   C+   T+ A +    M K  + P    Y  L+ GY K     +A  
Sbjct: 530  VPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALL 589

Query: 764  LFDRIIK-SDTPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDI--TCLVLGLG 934
            L+ +++K    P++VTYT L+  +     ++ A  L+ +M +KG+ PD+I  TC++ G  
Sbjct: 590  LYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFC 649

Query: 935  TVQD 946
             V D
Sbjct: 650  KVGD 653



 Score =  130 bits (326), Expect = 2e-27
 Identities = 76/238 (31%), Positives = 125/238 (52%)
 Frame = +2

Query: 5    EIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVG 184
            E+   G   +  +Y+I+I+  CK    + A +V+  ML NN+FP    Y  ++ GY K  
Sbjct: 523  EVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQS 582

Query: 185  RLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYN 364
               +AL L+ + LK G+ P++VT T++++ F  +  ++EA     EM  +G++PD   + 
Sbjct: 583  NPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFT 642

Query: 365  AIINGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYE 544
             II G CK     SA  +Y+            M + GK+PNVVTYT LI  +    RM +
Sbjct: 643  CIIAGFCKVGDMKSAWALYE-----------EMSQWGKSPNVVTYTCLIDGYFKIKRMDK 691

Query: 545  ALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCL 718
            A  +F +M    + PD + +TA+I GY  +G +    + + EM++ G+ P+   Y  L
Sbjct: 692  ADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  126 bits (317), Expect = 2e-26
 Identities = 84/340 (24%), Positives = 155/340 (45%), Gaps = 41/340 (12%)
 Frame = +2

Query: 17   FGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCK--VGR- 187
            FG   +  S + L+ C+ +    +    +  E+  +   P+V+ YT +++ YCK   G+ 
Sbjct: 207  FGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKN 266

Query: 188  --LDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVE--------------------- 298
              + +A  + ++    G  P VVT    + G C+ GCVE                     
Sbjct: 267  IDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCY 326

Query: 299  --------------EAILFMDEMQDQGIIPDLFTYNAIINGLCKELKSNSAQEIYQLILE 436
                          EA   +++M+  GI P  ++Y+ +I+GLCK+ +           +E
Sbjct: 327  NAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQ-----------VE 375

Query: 437  RTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAII 616
            +   L + M++    P++VTY+ L    C  G    +L +F  +  +G   D I++  +I
Sbjct: 376  KALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLI 435

Query: 617  AGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRIIKSDTP 796
             G+    D  +A     EM   G  P+ FT+  L+HG+CK +++D+A  +F  ++K    
Sbjct: 436  NGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQ 495

Query: 797  -NVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDIT 913
             N+ T   +   ++R G    AL+L N++++ GI P+  T
Sbjct: 496  LNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535



 Score =  124 bits (311), Expect = 9e-26
 Identities = 68/258 (26%), Positives = 139/258 (53%), Gaps = 1/258 (0%)
 Frame = +2

Query: 188 LDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNA 367
           L +A  +F Q  + G+  N+++C  +++ F +    E      +E++D G  P++FTY  
Sbjct: 194 LVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTI 253

Query: 368 IINGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEA 547
           ++N  CK     +   +      + +++ + M  +G++P VVTY   I   C  G +  A
Sbjct: 254 MMNYYCKGSFGKNIDIV------KATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFA 307

Query: 548 LKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHG 727
           L++ +++ ++    +   + A+I  +CR G+   A +   +M   GI+P  ++Y+ L+ G
Sbjct: 308 LRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDG 367

Query: 728 YCKSKQMDEARNLFDRIIKSDT-PNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPD 904
            CK  Q+++A +L + +++S+  P++VTY++L  G  ++G  EI+L +++ +  +G + D
Sbjct: 368 LCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHD 427

Query: 905 DITCLVLGLGTVQDDDRG 958
            I+   L  G V   D G
Sbjct: 428 VISYNTLINGFVLQRDMG 445



 Score =  105 bits (261), Expect = 6e-20
 Identities = 73/323 (22%), Positives = 149/323 (46%), Gaps = 30/323 (9%)
 Frame = +2

Query: 47   SILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLFKQGLK 226
            ++LI+ + +   L  A  V  +     L  ++     +L+ + +  + +    LF++   
Sbjct: 182  NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 227  GGMRPNVVTCTVIVDGFCKKGC-----VEEAILFMDEMQDQGIIPDLFTYNAIINGLCK- 388
             G  PNV T T++++ +CK        + +A   ++EM+  G  P + TY A I+GLC+ 
Sbjct: 242  SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301

Query: 389  ---ELKSNSAQEI-----------YQLI---------LERTSKLCKRMLKDGKTPNVVTY 499
               E      +++           Y  +         L    +L + M   G +P   +Y
Sbjct: 302  GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361

Query: 500  TILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEK 679
            +ILI   C  G++ +AL + +EM+   + P  + ++++  G C+ G T+ +L  +  +  
Sbjct: 362  SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421

Query: 680  RGITPDIFTYTCLVHGYCKSKQMDEARNLFDRI-IKSDTPNVVTYTALMAGYHRTGDLEI 856
             G   D+ +Y  L++G+   + M  A  L   + +    PN  T+  L+ G+ +   L+ 
Sbjct: 422  EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481

Query: 857  ALQLYNKMEEKGIQPDDITCLVL 925
            AL+++  M + G+Q +  TC ++
Sbjct: 482  ALEVFTIMLKVGVQLNIFTCNIM 504



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 34/120 (28%), Positives = 64/120 (53%)
 Frame = +2

Query: 2   KEIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKV 181
           KE+   G   D+  ++ +I  +CK+GD+ +A  +  EM      P+V  YT ++ GY K+
Sbjct: 627 KEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKI 686

Query: 182 GRLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTY 361
            R+D+A  LF +  +  + P+ +T T ++ G+   G  +      +EM++ G+ P+   Y
Sbjct: 687 KRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAY 746


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
            predicted protein [Populus trichocarpa]
          Length = 697

 Score =  251 bits (641), Expect = 5e-64
 Identities = 135/336 (40%), Positives = 208/336 (61%), Gaps = 26/336 (7%)
 Frame = +2

Query: 5    EIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVG 184
            E+ A GY+HD  SYS LI  + K  ++ +A  +++EM  N L PD   Y +++  YC+ G
Sbjct: 355  ELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKG 414

Query: 185  RLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYN 364
             L EAL  F   L+ G++P+++TC  IVD +C +G  EEA++++++M+DQ I+P+ +TY+
Sbjct: 415  CLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYS 474

Query: 365  AIINGLCKELKSNSAQEI---------------YQLILE----------RTSKLCKRMLK 469
             IIN LCK      A E+               Y  I++          +  KL ++M K
Sbjct: 475  VIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPK 534

Query: 470  DGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKT 649
             G  P+ VT T+L+  F   G+M +AL +FKEM  +G+  D+ AFTAII GYCR+G+ K 
Sbjct: 535  LGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKR 594

Query: 650  ALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRIIK-SDTPNVVTYTALMA 826
            A   Y++M++  +TP++ TYTCLV G+CK K++D A  L D + + S TP+V TYTAL+A
Sbjct: 595  AWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIA 654

Query: 827  GYHRTGDLEIALQLYNKMEEKGIQPDDITCLVLGLG 934
            GY R  +++ A +++++M++KG  PD I  L LGLG
Sbjct: 655  GYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690



 Score =  143 bits (361), Expect = 1e-31
 Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 7/302 (2%)
 Frame = +2

Query: 41   SYSILIECYCKLG-----DLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALG 205
            +Y+I+I  YCK       D++ A  ++ EM      P V  Y   +HG C+VG +++A  
Sbjct: 187  TYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWN 246

Query: 206  LFKQGLKGGMRP-NVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGL 382
               Q L+   +P N+     ++ GFC+KG  +EA+  ++EM+D+GI PD+++Y+ ++N  
Sbjct: 247  KI-QDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAF 305

Query: 383  CKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFK 562
            C E    S   + Q            M    K P +V  T ++      G + + L  F 
Sbjct: 306  CTEGDIESGMNLIQ-----------EMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFH 354

Query: 563  EMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSK 742
            E+  KG   D I+++ +I G+ +  + K+A +   EM K G+ PD   Y  L+  YC+  
Sbjct: 355  ELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKG 414

Query: 743  QMDEA-RNLFDRIIKSDTPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITCL 919
             + EA +N +  +     P+++T   ++  Y   G  E AL   N+M+++ I P+  T  
Sbjct: 415  CLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYS 474

Query: 920  VL 925
            V+
Sbjct: 475  VI 476



 Score =  140 bits (354), Expect = 9e-31
 Identities = 81/299 (27%), Positives = 157/299 (52%), Gaps = 6/299 (2%)
 Frame = +2

Query: 38   TSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGR-----LDEAL 202
            +S + L++C  +   L+A   + +++  +   P+VY YT +++ YCK        +++A 
Sbjct: 151  SSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQAS 210

Query: 203  GLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGL 382
             + ++  + G  P VVT  V + G C+ G +E+A   + +++      +++ YNA+I G 
Sbjct: 211  LILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGF 270

Query: 383  CKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFK 562
            C++ + + A            KL + M  +G +P++ +Y+IL++AFC  G +   + + +
Sbjct: 271  CQKGRPDEA-----------LKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQ 319

Query: 563  EMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSK 742
            EM      P  +  T+++ G    G     L+F+ E+  +G   D+ +Y+ L+HG+ K  
Sbjct: 320  EMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGH 379

Query: 743  QMDEARNLFDRIIKSD-TPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITC 916
             +  A NL   + K+   P+ + Y +L+  Y R G L+ AL+ +  M + G+QPD ITC
Sbjct: 380  NVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITC 438



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2    KEIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKV 181
            +++   G + D  + ++L++ + K G +  A  +  EM    L  D + +T ++ GYC+V
Sbjct: 530  RKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRV 589

Query: 182  GRLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTY 361
            G +  A  ++K+  +  + PNV T T +VDGFCK   ++ A + +D+M+   + PD+ TY
Sbjct: 590  GNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTY 649

Query: 362  NAIINGLCKELKSNSAQEIYQLI--LERTSKLCKRMLKDGKTPNVVTYTIL 508
             A+I G             YQ I  ++R  ++   M K G  P+ + Y  L
Sbjct: 650  TALIAG-------------YQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687


>emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  247 bits (631), Expect = 7e-63
 Identities = 128/335 (38%), Positives = 197/335 (58%), Gaps = 25/335 (7%)
 Frame = +2

Query: 20   GYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEA 199
            G++HD   YSI++   C+  DL+    + N+M+ +N  PD Y Y+++++ YC+  +L EA
Sbjct: 383  GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 200  LGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIING 379
            L +F+  +  G+ PNVVTCT++V GF  +G + EA LF+D+++  G++P+L TY  IING
Sbjct: 443  LEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIING 502

Query: 380  LCKELKSNSAQEIY------------------------QLILERTSKLCKRMLKDGKTPN 487
            LCK  K N    I+                         L L+   +L  +M+ +G  PN
Sbjct: 503  LCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPN 562

Query: 488  VVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYR 667
            + TYT LI+  C   ++ E + +FK MI +G+ PD+I +T++IA YC+  + K AL+ +R
Sbjct: 563  IFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFR 622

Query: 668  EMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRII-KSDTPNVVTYTALMAGYHRTG 844
            EME  G++ D F YTCL+ G+ K   MD A+   + ++ K  TP VVTYT L+ GY + G
Sbjct: 623  EMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIG 682

Query: 845  DLEIALQLYNKMEEKGIQPDDITCLVLGLGTVQDD 949
            D + A+ +YN M + GI PD     +LGLG   DD
Sbjct: 683  DEKKAMVMYNSMLQAGIAPDAKLSCILGLGNDGDD 717



 Score =  167 bits (424), Expect = 7e-39
 Identities = 92/334 (27%), Positives = 172/334 (51%), Gaps = 27/334 (8%)
 Frame = +2

Query: 20   GYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEA 199
            G+  D  SYSIL++  CK GD+     ++ EM  N + P++  Y+++LHG C+ GR++ A
Sbjct: 313  GFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELA 372

Query: 200  LGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIING 379
              LFK+    G + + +  ++++ G C+   +E      ++M     +PD + Y+++I  
Sbjct: 373  FELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYA 432

Query: 380  LCKELKSNSAQEIYQL------------------------ILERTSKLCKRMLKDGKTPN 487
             C+  +   A E+++L                        ++        ++ + G  PN
Sbjct: 433  YCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPN 492

Query: 488  VVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYR 667
            + TY ++I+  C   +  +   +F +MI +G VPD + ++ II G+ +  D + A   Y 
Sbjct: 493  LCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYY 552

Query: 668  EMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRII-KSDTPNVVTYTALMAGYHRTG 844
            +M   G  P+IFTYT L++G C   ++ E   LF  +I +  TP+ + YT+L+A Y +  
Sbjct: 553  KMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRS 612

Query: 845  DLEIALQLYNKMEEKGIQPDDI--TCLVLGLGTV 940
            +++ AL+++ +ME +G+  D    TCL+ G   V
Sbjct: 613  NMKAALEIFREMETEGLSADSFVYTCLIGGFSKV 646



 Score =  143 bits (360), Expect = 2e-31
 Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 26/341 (7%)
 Frame = +2

Query: 5    EIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFP-DVYRYTNVLHGYCKV 181
            E+   G R +  +Y   +   C+   + +A   + +ML    +P + Y +  V+HG+C  
Sbjct: 238  EMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFL-QMLCQRGYPCNSYCFNAVIHGFCHD 296

Query: 182  GRLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTY 361
            G++ +A+ +F    K G  P+V + +++VDG CK+G V      + EM   GI P+L +Y
Sbjct: 297  GQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356

Query: 362  NAIINGLCKELKSNSAQEIYQ------------------------LILERTSKLCKRMLK 469
            +++++GLC+  +   A E+++                        L LE    L   M+ 
Sbjct: 357  SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416

Query: 470  DGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKT 649
                P+   Y+ LI A+C   ++ EAL+VF+ MI  GI P+ +  T ++ G+   G    
Sbjct: 417  HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGE 476

Query: 650  ALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLF-DRIIKSDTPNVVTYTALMA 826
            A  F  ++ + G+ P++ TY  +++G CK  + ++   +F D I +   P+ V Y+ ++ 
Sbjct: 477  AFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIID 536

Query: 827  GYHRTGDLEIALQLYNKMEEKGIQPDDITCLVLGLGTVQDD 949
            G+ +  DL+ A +LY KM ++G +P+  T   L  G   DD
Sbjct: 537  GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDD 577



 Score =  142 bits (359), Expect = 2e-31
 Identities = 83/298 (27%), Positives = 152/298 (51%), Gaps = 3/298 (1%)
 Frame = +2

Query: 41   SYSILIECYCKLGDL--DAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLFK 214
            SYS+L+  Y     L  + A ++++EM    + P+   Y   L+G C+  ++  A    +
Sbjct: 213  SYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQ 272

Query: 215  QGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCKEL 394
               + G   N      ++ GFC  G V +A+   D M+  G +PD+ +Y+ +++GLCK+ 
Sbjct: 273  MLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQ- 331

Query: 395  KSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIV 574
                    Y +++E        M ++G TPN+V+Y+ L+   C  GR+  A ++FK +  
Sbjct: 332  --GDVLTGYYMLVE--------MARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKD 381

Query: 575  KGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDE 754
            +G   D I ++ ++ G C+  D +   D + +M      PD + Y+ L++ YC+ +Q+ E
Sbjct: 382  QGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441

Query: 755  ARNLFDRII-KSDTPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITCLVL 925
            A  +F+ +I     PNVVT T L+ G+   G +  A    +K+ + G+ P+  T  V+
Sbjct: 442  ALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVI 499



 Score =  109 bits (272), Expect = 3e-21
 Identities = 64/231 (27%), Positives = 108/231 (46%)
 Frame = +2

Query: 5    EIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVG 184
            ++  FG   +  +Y ++I   CK+   +    +  +M+     PD   Y+ ++ G+ K  
Sbjct: 483  KVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 185  RLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYN 364
             L EA  L+ + +  G +PN+ T T +++G C    + E +     M  +G+ PD   Y 
Sbjct: 543  DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYT 602

Query: 365  AIINGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYE 544
            ++I   CK     +A EI+           + M  +G + +   YT LI  F     M  
Sbjct: 603  SLIACYCKRSNMKAALEIF-----------REMETEGLSADSFVYTCLIGGFSKVLAMDG 651

Query: 545  ALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPD 697
            A    +EM+ KG+ P  + +T +I GY +IGD K A+  Y  M + GI PD
Sbjct: 652  AQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  105 bits (262), Expect = 4e-20
 Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 1/279 (0%)
 Frame = +2

Query: 119 GNNLFPDVYRYTNVLHGYCKVGRLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVE 298
           G+   P VY    V+  + ++   ++AL  + +  K G+   V  C  ++ G  +   + 
Sbjct: 138 GSMTLPQVY--ATVIRVFVELSMFEDALVTYVEAKKVGVELQV--CNFLLKGLVEGNQIM 193

Query: 299 EAILFMDEMQDQGIIPDLFTYNAIINGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGK 478
                 D+M+  G  P++++Y+ +++      K         L LE   +L   M  +G 
Sbjct: 194 YVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAK---------LCLEEAQELLSEMEVEGV 244

Query: 479 TPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALD 658
            PN  TY   +   C   ++  A    + +  +G   +   F A+I G+C  G    A++
Sbjct: 245 RPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVE 304

Query: 659 FYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRIIKSD-TPNVVTYTALMAGYH 835
            +  M+K G  PD+ +Y+ LV G CK   +     +   + ++  TPN+V+Y++L+ G  
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364

Query: 836 RTGDLEIALQLYNKMEEKGIQPDDITCLVLGLGTVQDDD 952
           R G +E+A +L+ +++++G + D I   ++  G  Q  D
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD 403


>ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
            mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  244 bits (624), Expect = 4e-62
 Identities = 131/345 (37%), Positives = 199/345 (57%), Gaps = 28/345 (8%)
 Frame = +2

Query: 20   GYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEA 199
            G++HD   YSI++   C+  +++  C + N+M+ +N  PD Y YT++++ +C+   L +A
Sbjct: 381  GFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDA 440

Query: 200  LGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIING 379
            LG+F+  L  G+ PNVVTCT++VDGF K+  ++EA LF+ +++  GI+P+L  Y  IING
Sbjct: 441  LGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIING 500

Query: 380  LCKELKSNSA---------------QEIYQLILERTSKLCK---------RMLKDGKTPN 487
            LCK  KS+                   +Y +I++   K  K         +ML +G  PN
Sbjct: 501  LCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPN 560

Query: 488  VVTYTILISAFCCGGRMYEALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYR 667
            V TYT LI+  C   R+ E + +FK MI +G+ PD+I +T++I  YC+  + K AL+ +R
Sbjct: 561  VFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFR 620

Query: 668  EMEKRGITPDIFTYTCLVHGYCKSKQMDEARNLFDRII-KSDTPNVVTYTALMAGYHRTG 844
             M K G++ D F YTCL+ G+ K   MD A+ L + +  K  TP+VVTYT L+ GY + G
Sbjct: 621  GMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIG 680

Query: 845  DLEIALQLYNKMEEKGIQPDDITCLVLGLGTVQD---DDRGERTI 970
            D   A   YN M + GI PD     +LG G   D   D R E+ +
Sbjct: 681  DERKANMTYNSMLQAGITPDAKLSCILGFGNDADGFEDSREEKDV 725



 Score =  150 bits (378), Expect = 1e-33
 Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 1/294 (0%)
 Frame = +2

Query: 32   DKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLF 211
            D  SYSIL++  CK GD+     ++ EM  N + P +  Y+++LHG C+ G+++ A  LF
Sbjct: 315  DTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELF 374

Query: 212  KQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCKE 391
            ++  + G + + +  ++I++G C+   +E      ++M     +PD + Y ++I   C+ 
Sbjct: 375  RRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRH 434

Query: 392  LKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFKEMI 571
                 A  +++L           ML  G +PNVVT TIL+  F     + EA     ++ 
Sbjct: 435  RNLTDALGVFEL-----------MLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVR 483

Query: 572  VKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMD 751
              GIVP+   +  II G C++  +      + +M KRG  PD   Y+ ++  + K+ ++ 
Sbjct: 484  QFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLP 543

Query: 752  EARNLFDRIIKSDT-PNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDI 910
            EA  LF +++   T PNV TYT+L+ G      L   + L+  M  +G+ PD I
Sbjct: 544  EAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRI 597



 Score =  137 bits (345), Expect = 1e-29
 Identities = 79/292 (27%), Positives = 152/292 (52%), Gaps = 4/292 (1%)
 Frame = +2

Query: 41   SYSILIECYCKLGD---LDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLF 211
            SYS+L+  Y   GD   L  A ++++EM    + P+   Y   L+G  +  ++  A    
Sbjct: 211  SYSVLMSAYTH-GDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFL 269

Query: 212  KQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCKE 391
            +   + G   N      ++ GFC++G V+EAI   D M+  G++PD  +Y+ +++GLCK+
Sbjct: 270  QMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQ 329

Query: 392  LKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFKEMI 571
                     Y L++E        M ++G  P +V+Y+ L+   C  G++  A ++F+ + 
Sbjct: 330  ---GDVLTGYDLLVE--------MARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLE 378

Query: 572  VKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMD 751
             +G   D I ++ I+ G C+  + +   D + +M      PD + YT L++ +C+ + + 
Sbjct: 379  EQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLT 438

Query: 752  EARNLFDRIIKSD-TPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPD 904
            +A  +F+ ++ S  +PNVVT T L+ G+ +   ++ A    +K+ + GI P+
Sbjct: 439  DALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPN 490



 Score =  135 bits (340), Expect = 4e-29
 Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 1/303 (0%)
 Frame = +2

Query: 44   YSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVGRLDEALGLFKQGL 223
            ++ +I+ +C+ G +  A +V + M    L PD + Y+ ++ G CK G +     L  +  
Sbjct: 284  FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMA 343

Query: 224  KGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYNAIINGLCKELKSN 403
            + G+ P +V+ + ++ G C+ G VE A      +++QG   D   Y+ I+NG C+ L   
Sbjct: 344  RNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLN-- 401

Query: 404  SAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEALKVFKEMIVKGI 583
                     +E    L   M+     P+   YT LI AFC    + +AL VF+ M+  G+
Sbjct: 402  ---------IEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGV 452

Query: 584  VPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGYCKSKQMDEARN 763
             P+ +  T ++ G+ +      A  F  ++ + GI P++  Y  +++G CK  + D    
Sbjct: 453  SPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWG 512

Query: 764  LF-DRIIKSDTPNVVTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITCLVLGLGTV 940
            +F D I +   P+ V Y+ ++  + +   L  A +L++KM ++G +P+  T   L  G  
Sbjct: 513  IFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLC 572

Query: 941  QDD 949
             DD
Sbjct: 573  HDD 575



 Score =  108 bits (271), Expect = 4e-21
 Identities = 73/281 (25%), Positives = 127/281 (45%), Gaps = 38/281 (13%)
 Frame = +2

Query: 197  ALGLFKQGLKGGMRPNVVTCTVIVDGFCK--KGCVEEAILFMDEMQDQGIIPDLFTYNAI 370
            A  LF      G  PNV + +V++  +    +  + EA   + EM+ +G+ P+  TY   
Sbjct: 193  ARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTY 252

Query: 371  INGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYEAL 550
            + GL +  +  SA    Q++ +R           G   N   +  +I  FC  G++ EA+
Sbjct: 253  LYGLSRTRQVASAWNFLQMLCQR-----------GNPCNTYCFNAVIQGFCREGQVQEAI 301

Query: 551  KVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPDIFTYTCLVHGY 730
            +VF  M   G+VPD  +++ ++ G C+ GD  T  D   EM + GI P + +Y+ L+HG 
Sbjct: 302  EVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGL 361

Query: 731  CKSKQMDEARNLFDRI----IKSD--------------------------------TPNV 802
            C++ +++ A  LF R+     K D                                 P+ 
Sbjct: 362  CRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDA 421

Query: 803  VTYTALMAGYHRTGDLEIALQLYNKMEEKGIQPDDITCLVL 925
              YT+L+  + R  +L  AL ++  M + G+ P+ +TC +L
Sbjct: 422  YNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTIL 462



 Score =  108 bits (271), Expect = 4e-21
 Identities = 68/231 (29%), Positives = 107/231 (46%)
 Frame = +2

Query: 5    EIGAFGYRHDKTSYSILIECYCKLGDLDAACKVMNEMLGNNLFPDVYRYTNVLHGYCKVG 184
            ++  FG   +   Y ++I   CK+   D    +  +M+     PD   Y+ ++  + K  
Sbjct: 481  KVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKAL 540

Query: 185  RLDEALGLFKQGLKGGMRPNVVTCTVIVDGFCKKGCVEEAILFMDEMQDQGIIPDLFTYN 364
            +L EA  LF + L  G +PNV T T +++G C    + E +     M  +G+ PD   Y 
Sbjct: 541  KLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYT 600

Query: 365  AIINGLCKELKSNSAQEIYQLILERTSKLCKRMLKDGKTPNVVTYTILISAFCCGGRMYE 544
            ++I   CK     +A EI+           + M K G + +   YT LI  F     M  
Sbjct: 601  SLIVCYCKRSNMKAALEIF-----------RGMGKLGLSADAFLYTCLIGGFSKVLAMDG 649

Query: 545  ALKVFKEMIVKGIVPDKIAFTAIIAGYCRIGDTKTALDFYREMEKRGITPD 697
            A  + +EM  KG+ P  + +T +I GY +IGD + A   Y  M + GITPD
Sbjct: 650  AQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700