BLASTX nr result

ID: Coptis24_contig00002787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002787
         (1542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Viti...   836   0.0  
ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Viti...   827   0.0  
ref|XP_002313564.1| histone deacetylase [Populus trichocarpa] gi...   808   0.0  
dbj|BAJ33721.1| unnamed protein product [Thellungiella halophila]     799   0.0  
ref|XP_002328151.1| histone deacetylase [Populus trichocarpa] gi...   798   0.0  

>ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
          Length = 502

 Score =  836 bits (2160), Expect = 0.0
 Identities = 400/482 (82%), Positives = 425/482 (88%), Gaps = 1/482 (0%)
 Frame = -1

Query: 1443 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1264
            M+ GGNSLPSG DGVKRK+SYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1    MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60

Query: 1263 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1084
            VLKPFPARDRDLCRFHADDYV+FLR ITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61   VLKPFPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT 120

Query: 1083 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 904
            YAGGSVGGAVKLNHGLCDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121  YAGGSVGGAVKLNHGLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180

Query: 903  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 724
            VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G GKGKYYSLNVPLDDGI
Sbjct: 181  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI 240

Query: 723  DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 544
            DDE+Y  LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
Sbjct: 241  DDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 300

Query: 543  VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 364
            VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301  VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360

Query: 363  KNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 187
            KNS Q+L+EIR KLLDNL+KLRHAPSVQFQER                        DME 
Sbjct: 361  KNSHQILDEIRAKLLDNLSKLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPESDMEV 420

Query: 186  DTERKPLSNNLQNANVKREVIEPEVKDLDDQKGVVLHGEGTDRMADDTSCARVLDIGSMS 7
            D E KPL      + VKRE++EPE KD DD+KGV  H  G D  A++T+C++  D+  M 
Sbjct: 421  DEEHKPLP-----SRVKREIVEPEAKDSDDKKGVAEHSRGFDTAAEETACSKASDVCPMP 475

Query: 6    IE 1
            I+
Sbjct: 476  ID 477


>ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
            gi|296087188|emb|CBI33562.3| unnamed protein product
            [Vitis vinifera]
          Length = 502

 Score =  827 bits (2137), Expect = 0.0
 Identities = 397/482 (82%), Positives = 422/482 (87%), Gaps = 1/482 (0%)
 Frame = -1

Query: 1443 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1264
            M+ GGNSLPSG DGVKRK+SYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1    MDTGGNSLPSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60

Query: 1263 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1084
            VLKP PARDRDLCRFHADDYV+FLR ITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61   VLKPCPARDRDLCRFHADDYVSFLRGITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT 120

Query: 1083 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 904
            YAGGSVGGAVKLNHG CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121  YAGGSVGGAVKLNHGFCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180

Query: 903  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 724
            VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G GKGKYYSLNVPLDDGI
Sbjct: 181  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYSLNVPLDDGI 240

Query: 723  DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 544
            DDE+Y  LFKPI+GKVME+FRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVR+MRSFN
Sbjct: 241  DDESYHCLFKPIIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN 300

Query: 543  VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 364
            VPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNMEN
Sbjct: 301  VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN 360

Query: 363  KNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 187
            KNS QLL+EIR KLLDNL+ LRHAPSVQFQER                        DME 
Sbjct: 361  KNSHQLLDEIRAKLLDNLSTLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPDSDMEI 420

Query: 186  DTERKPLSNNLQNANVKREVIEPEVKDLDDQKGVVLHGEGTDRMADDTSCARVLDIGSMS 7
            D ERK L        VKRE++EPE KDL+D+KGV  H  G D  A++T+C++  D+  M 
Sbjct: 421  DDERKSLP-----GRVKREIVEPESKDLEDKKGVAEHSRGFDTTAEETACSKASDVCPMP 475

Query: 6    IE 1
            I+
Sbjct: 476  ID 477


>ref|XP_002313564.1| histone deacetylase [Populus trichocarpa] gi|118486921|gb|ABK95294.1|
            unknown [Populus trichocarpa] gi|222849972|gb|EEE87519.1|
            histone deacetylase [Populus trichocarpa]
          Length = 499

 Score =  808 bits (2086), Expect = 0.0
 Identities = 391/483 (80%), Positives = 418/483 (86%), Gaps = 2/483 (0%)
 Frame = -1

Query: 1443 MEIGGNSLPSG-PDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 1267
            M+ GGNSLPS  PDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
Sbjct: 1    MDTGGNSLPSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 60

Query: 1266 QVLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQ 1087
            QVLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQ
Sbjct: 61   QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ 120

Query: 1086 TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 907
            TYAGGSVGGAVKLNH LCDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLK HERVL
Sbjct: 121  TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL 180

Query: 906  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDG 727
            YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGD+RD+G  KGKYYSLNVPLDDG
Sbjct: 181  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFSKGKYYSLNVPLDDG 240

Query: 726  IDDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSF 547
            IDDE+Y  LFKP++GKVMEVF+PGAVVLQCGADSLSGDRLGCFNLSIKGHAECV+YMRSF
Sbjct: 241  IDDESYHFLFKPLIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSF 300

Query: 546  NVPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNME 367
            NVPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNME
Sbjct: 301  NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME 360

Query: 366  NKNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME 187
            NKNS QLLEEIR KLLDNL+KL+HAPSVQFQER                        DM+
Sbjct: 361  NKNSFQLLEEIRSKLLDNLSKLQHAPSVQFQERPPDTELLEAEEDQDDADERWDPDSDMD 420

Query: 186  -DTERKPLSNNLQNANVKREVIEPEVKDLDDQKGVVLHGEGTDRMADDTSCARVLDIGSM 10
             D ERKPL      + VKRE++E E K+L+ QKG   +  G D   D+ +  + LD G M
Sbjct: 421  VDDERKPLP-----SRVKREIVEAEPKELEGQKGSSEYARGFDAAIDENASGKALDAGPM 475

Query: 9    SIE 1
             I+
Sbjct: 476  QID 478


>dbj|BAJ33721.1| unnamed protein product [Thellungiella halophila]
          Length = 500

 Score =  799 bits (2063), Expect = 0.0
 Identities = 381/482 (79%), Positives = 418/482 (86%), Gaps = 1/482 (0%)
 Frame = -1

Query: 1443 MEIGGNSLPSGPDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 1264
            M+ GGNSL SGPDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
Sbjct: 1    MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ 60

Query: 1263 VLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQT 1084
            VLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQ+RQLKRFNVGEDCPVFDGLY++CQT
Sbjct: 61   VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120

Query: 1083 YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 904
            YAGGSVGG+VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
Sbjct: 121  YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180

Query: 903  VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDGI 724
            VDIDIHHGDGVEEAFY+TDRVMTVSFHKFGDYFPGTG ++D+G+G GKYYSLNVPLDDGI
Sbjct: 181  VDIDIHHGDGVEEAFYSTDRVMTVSFHKFGDYFPGTGHIQDIGYGNGKYYSLNVPLDDGI 240

Query: 723  DDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 544
            DDE+Y  LFKPI+GKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECV++MRSFN
Sbjct: 241  DDESYHLLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300

Query: 543  VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN 364
            VPLLL+GGGGYTIRNVARCWCYETGVALG+EVDDKMP+HEYYEYFGPDY LHVAPSNMEN
Sbjct: 301  VPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPEHEYYEYFGPDYTLHVAPSNMEN 360

Query: 363  KNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME- 187
            KNSRQ+LE IR  LL NL+KL+HAPSV FQER                        DM+ 
Sbjct: 361  KNSRQMLEVIRNDLLHNLSKLQHAPSVPFQERPPETEAPEVDEDQEDGDKRWDPDSDMDV 420

Query: 186  DTERKPLSNNLQNANVKREVIEPEVKDLDDQKGVVLHGEGTDRMADDTSCARVLDIGSMS 7
            D +RKP+ N      VKRE +EP+ KD D  KGV+  G+G +   D++   +V  + ++ 
Sbjct: 421  DDDRKPIPN-----RVKREAVEPDAKDKDGLKGVMERGKGFEAGMDESGSTKVTGVNTVG 475

Query: 6    IE 1
            +E
Sbjct: 476  ME 477


>ref|XP_002328151.1| histone deacetylase [Populus trichocarpa] gi|222837666|gb|EEE76031.1|
            histone deacetylase [Populus trichocarpa]
          Length = 501

 Score =  798 bits (2062), Expect = 0.0
 Identities = 386/483 (79%), Positives = 414/483 (85%), Gaps = 2/483 (0%)
 Frame = -1

Query: 1443 MEIGGNSLPSG-PDGVKRKISYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 1267
            M+ GGNSL S  PDGVKRK+ YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
Sbjct: 1    MDTGGNSLSSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM 60

Query: 1266 QVLKPFPARDRDLCRFHADDYVTFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYNYCQ 1087
            QVLKPFPARDRDLCRFHADDYV+FLRSITPETQQDQLRQLKRFNVGEDCPVFDGLY++CQ
Sbjct: 61   QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ 120

Query: 1086 TYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVL 907
            TYAGGSVGGAVKLNH LCDIA+NWAGGLHHAKKCEASGFCYVNDIVLAILELLK HERVL
Sbjct: 121  TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL 180

Query: 906  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDVGHGKGKYYSLNVPLDDG 727
            YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRD+G+ KGKYYSLNVPLDDG
Sbjct: 181  YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYSKGKYYSLNVPLDDG 240

Query: 726  IDDETYQSLFKPIVGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSF 547
            IDDE+Y  LFKP++GKVMEVF+PGAV+LQCGADSLSGDRLGCFNLSIKGHAECV++MRSF
Sbjct: 241  IDDESYHFLFKPLIGKVMEVFKPGAVILQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF 300

Query: 546  NVPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNME 367
            NVPLLL+GGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDY LHVAPSNME
Sbjct: 301  NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME 360

Query: 366  NKNSRQLLEEIRVKLLDNLTKLRHAPSVQFQERXXXXXXXXXXXXXXXXXXXXXXXXDME 187
            NKNS Q+LEEIR KLLDNL+KL+HAPSVQFQER                        DM+
Sbjct: 361  NKNSHQVLEEIRCKLLDNLSKLQHAPSVQFQERVPDTELPEAEEEQNEADERWDPDSDMD 420

Query: 186  -DTERKPLSNNLQNANVKREVIEPEVKDLDDQKGVVLHGEGTDRMADDTSCARVLDIGSM 10
             D ERKPL        VKRE++E E K+ + QKG   H  G D    + +  + LD G  
Sbjct: 421  VDEERKPLP-----GRVKREIVEAEPKESEGQKGSSGHARGFDTTIAENASGKALDAGPK 475

Query: 9    SIE 1
             I+
Sbjct: 476  QID 478


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