BLASTX nr result

ID: Coptis24_contig00002749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002749
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278653.1| PREDICTED: ganglioside-induced differentiati...   332   1e-88
dbj|BAJ61956.1| Sec14 like protein [Nicotiana tabacum]                325   2e-86
dbj|BAJ61955.1| Sec14 like protein [Nicotiana benthamiana]            323   5e-86
ref|XP_002530731.1| conserved hypothetical protein [Ricinus comm...   322   1e-85
ref|XP_002285908.1| PREDICTED: ganglioside-induced differentiati...   312   1e-82

>ref|XP_002278653.1| PREDICTED: ganglioside-induced differentiation-associated protein 2
           [Vitis vinifera] gi|297742206|emb|CBI34355.3| unnamed
           protein product [Vitis vinifera]
          Length = 202

 Score =  332 bits (850), Expect = 1e-88
 Identities = 158/197 (80%), Positives = 178/197 (90%)
 Frame = -1

Query: 865 SLSEQVQLIEKLEIFKIQGRDKRGRQILRVIGKFLPVRVLSSEALMKYLEEKIFPSLGER 686
           S SEQ QL+EKLEIFKI+GRDKRGR+ILR+IGK+ P R LS + + KYLE+KIFP LG++
Sbjct: 6   SPSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKLGKK 65

Query: 685 PFSVVYVHTSVQRSENFPGISNLRSIYEAIPVSIKENLEAVYFVHPGLQARLFLATFGRF 506
            FSV+YVHT V+RSENFPGIS LRSIYEAIPV++KENLEAVYFVHPGLQ+RLFLATFGR 
Sbjct: 66  QFSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATFGRL 125

Query: 505 LFSGGLYGKLKFVNRLEFLWEHVRRNGIEIPEFVYDHDEELEYRPMMDYGLESDHPRVYA 326
           L  GGLYGKL++VNRL+ LWEHVRRN IEIP+FVYDHDEELEYRPMMDYGLESDHPRVY 
Sbjct: 126 LLGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPRVYG 185

Query: 325 APAMDSPVSTYSMRCIS 275
           APA+DSPVS YSMRCIS
Sbjct: 186 APAVDSPVSMYSMRCIS 202


>dbj|BAJ61956.1| Sec14 like protein [Nicotiana tabacum]
          Length = 199

 Score =  325 bits (832), Expect = 2e-86
 Identities = 153/194 (78%), Positives = 175/194 (90%)
 Frame = -1

Query: 856 EQVQLIEKLEIFKIQGRDKRGRQILRVIGKFLPVRVLSSEALMKYLEEKIFPSLGERPFS 677
           EQ QLIEKLEIFKIQGRDKRGR+ LR+IGKF P R LS E + KYL EKIFP L +RPF+
Sbjct: 6   EQEQLIEKLEIFKIQGRDKRGRKTLRIIGKFFPARNLSVEVVKKYLAEKIFPELEKRPFA 65

Query: 676 VVYVHTSVQRSENFPGISNLRSIYEAIPVSIKENLEAVYFVHPGLQARLFLATFGRFLFS 497
           VVYVHT V++SENFPG+S LRS Y+AIPV ++ENLEAVYF+HPGLQARLFLATFGRF+FS
Sbjct: 66  VVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAVYFLHPGLQARLFLATFGRFIFS 125

Query: 496 GGLYGKLKFVNRLEFLWEHVRRNGIEIPEFVYDHDEELEYRPMMDYGLESDHPRVYAAPA 317
           GGLYGKL++VNR+++LWEHVRRN IE+PEFV+DHDE+LEYRPMMDYGLESDH RVY APA
Sbjct: 126 GGLYGKLRYVNRVDYLWEHVRRNEIEMPEFVFDHDEDLEYRPMMDYGLESDHARVYGAPA 185

Query: 316 MDSPVSTYSMRCIS 275
           +DSPVS YSMRCIS
Sbjct: 186 VDSPVSMYSMRCIS 199


>dbj|BAJ61955.1| Sec14 like protein [Nicotiana benthamiana]
          Length = 199

 Score =  323 bits (828), Expect = 5e-86
 Identities = 152/194 (78%), Positives = 175/194 (90%)
 Frame = -1

Query: 856 EQVQLIEKLEIFKIQGRDKRGRQILRVIGKFLPVRVLSSEALMKYLEEKIFPSLGERPFS 677
           EQ QLIEKLEIFKIQGRDKRGR+ LR+IGKF P R LS E + KYL EKIFP L +RPF+
Sbjct: 6   EQEQLIEKLEIFKIQGRDKRGRKTLRIIGKFFPARNLSVEVVKKYLAEKIFPELEKRPFA 65

Query: 676 VVYVHTSVQRSENFPGISNLRSIYEAIPVSIKENLEAVYFVHPGLQARLFLATFGRFLFS 497
           VVYVHT V++SENFPG+S LRS Y+AIPV ++ENLEAVYF+HPGLQARLFLATFGRF+FS
Sbjct: 66  VVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAVYFLHPGLQARLFLATFGRFIFS 125

Query: 496 GGLYGKLKFVNRLEFLWEHVRRNGIEIPEFVYDHDEELEYRPMMDYGLESDHPRVYAAPA 317
           GGLYGKL++VNR+++LW+HVRRN IE+PEFV+DHDE+LEYRPMMDYGLESDH RVY APA
Sbjct: 126 GGLYGKLRYVNRVDYLWKHVRRNEIEMPEFVFDHDEDLEYRPMMDYGLESDHARVYGAPA 185

Query: 316 MDSPVSTYSMRCIS 275
           +DSPVS YSMRCIS
Sbjct: 186 VDSPVSMYSMRCIS 199


>ref|XP_002530731.1| conserved hypothetical protein [Ricinus communis]
           gi|223529695|gb|EEF31637.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score =  322 bits (825), Expect = 1e-85
 Identities = 148/197 (75%), Positives = 177/197 (89%)
 Frame = -1

Query: 865 SLSEQVQLIEKLEIFKIQGRDKRGRQILRVIGKFLPVRVLSSEALMKYLEEKIFPSLGER 686
           S +EQ QLIEKLEIFKI GRDK G  ILR+IGKF P R+++ +AL  YLEEKI+P L  +
Sbjct: 6   SYAEQHQLIEKLEIFKILGRDKHGHNILRIIGKFFPARIITVDALKSYLEEKIYPRLETK 65

Query: 685 PFSVVYVHTSVQRSENFPGISNLRSIYEAIPVSIKENLEAVYFVHPGLQARLFLATFGRF 506
           PFSV+YVHT VQRSENFPGIS LRS+Y++IP+ +KENL+A+YF+HPGLQARLFLATFGRF
Sbjct: 66  PFSVLYVHTGVQRSENFPGISALRSVYDSIPIKVKENLQALYFLHPGLQARLFLATFGRF 125

Query: 505 LFSGGLYGKLKFVNRLEFLWEHVRRNGIEIPEFVYDHDEELEYRPMMDYGLESDHPRVYA 326
           LFSGGLYGKL++++R+++LW+HVRRN +EIPEFV+DHDE+LEYRPMMDYGLESDHPRVY 
Sbjct: 126 LFSGGLYGKLRYISRIDYLWDHVRRNEVEIPEFVHDHDEDLEYRPMMDYGLESDHPRVYG 185

Query: 325 APAMDSPVSTYSMRCIS 275
           APA+DSPVS YSMRCIS
Sbjct: 186 APAVDSPVSMYSMRCIS 202


>ref|XP_002285908.1| PREDICTED: ganglioside-induced differentiation-associated protein 2
           [Vitis vinifera] gi|147780609|emb|CAN69115.1|
           hypothetical protein VITISV_031842 [Vitis vinifera]
           gi|302141695|emb|CBI18898.3| unnamed protein product
           [Vitis vinifera]
          Length = 205

 Score =  312 bits (799), Expect = 1e-82
 Identities = 146/194 (75%), Positives = 171/194 (88%)
 Frame = -1

Query: 856 EQVQLIEKLEIFKIQGRDKRGRQILRVIGKFLPVRVLSSEALMKYLEEKIFPSLGERPFS 677
           +Q QL+EKL+IFKIQG D+ GR++L +IGK+ P RV+S E L KYLEEKIF  LGE+PFS
Sbjct: 12  DQEQLMEKLQIFKIQGTDRHGRKVLVIIGKYFPARVISVEVLKKYLEEKIFSQLGEKPFS 71

Query: 676 VVYVHTSVQRSENFPGISNLRSIYEAIPVSIKENLEAVYFVHPGLQARLFLATFGRFLFS 497
           VVYVHT VQRS+NFPGIS LRSIYEAIP+++K+++EAVYF+HPGLQARLF ATFGRFLF+
Sbjct: 72  VVYVHTGVQRSDNFPGISVLRSIYEAIPINVKDHIEAVYFLHPGLQARLFFATFGRFLFN 131

Query: 496 GGLYGKLKFVNRLEFLWEHVRRNGIEIPEFVYDHDEELEYRPMMDYGLESDHPRVYAAPA 317
           GGLY KL++VNRLEFLW HVRRNG+EIPEFV DHDEELE RP+MDYGLESDHPR YA+P 
Sbjct: 132 GGLYQKLQYVNRLEFLWSHVRRNGLEIPEFVLDHDEELEDRPLMDYGLESDHPRTYASPT 191

Query: 316 MDSPVSTYSMRCIS 275
            DSPV  YSMRCI+
Sbjct: 192 HDSPVGMYSMRCIA 205


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