BLASTX nr result

ID: Coptis24_contig00002743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002743
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24133.1|CHLD_TOBAC RecName: Full=Magnesium-chelatase subunit...   295   4e-78
ref|XP_002274874.2| PREDICTED: magnesium-chelatase subunit chlD,...   291   5e-77
emb|CBI17197.3| unnamed protein product [Vitis vinifera]              291   5e-77
ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-75
ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas...   286   1e-75

>sp|O24133.1|CHLD_TOBAC RecName: Full=Magnesium-chelatase subunit ChlD, chloroplastic;
           Short=Mg-chelatase subunit D; AltName:
           Full=Mg-protoporphyrin IX chelatase subunit ChlD; Flags:
           Precursor gi|2239151|emb|CAA71128.1| CHLD magnesium
           chelatase subunit [Nicotiana tabacum]
          Length = 758

 Score =  295 bits (756), Expect = 4e-78
 Identities = 147/162 (90%), Positives = 158/162 (97%)
 Frame = -1

Query: 691 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLSEGVNTVEREGISFRH 512
           EESVK+GTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVL+EGVN VEREGISFRH
Sbjct: 193 EESVKSGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFRH 252

Query: 511 PCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVAAVGIATKFQECSNEVFKM 332
           PCKPLLIATYNPEEG+VREHLLDRIAINLSADLPMSFD+RVAAV IAT+FQECSNEVFKM
Sbjct: 253 PCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMSFDDRVAAVDIATRFQECSNEVFKM 312

Query: 331 VGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 206
           V EETD A+TQIILAREYLKDV++SR+QLKYLVMEA+RGGC+
Sbjct: 313 VDEETDSAKTQIILAREYLKDVTISRDQLKYLVMEAIRGGCQ 354


>ref|XP_002274874.2| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic [Vitis
           vinifera]
          Length = 720

 Score =  291 bits (746), Expect(2) = 5e-77
 Identities = 146/162 (90%), Positives = 158/162 (97%)
 Frame = -1

Query: 691 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLSEGVNTVEREGISFRH 512
           EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVL+EGVN VEREGISFRH
Sbjct: 160 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLAEGVNIVEREGISFRH 219

Query: 511 PCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVAAVGIATKFQECSNEVFKM 332
           PCKPLLIATYNPEEG+VREHLLDR+AINLSADLPMSF++RVAAVGIAT+FQE SNEVF+M
Sbjct: 220 PCKPLLIATYNPEEGAVREHLLDRVAINLSADLPMSFEDRVAAVGIATQFQERSNEVFQM 279

Query: 331 VGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 206
           V EET+ A+TQIILAREYLKDVS+SR+QLKYLVMEALRGGC+
Sbjct: 280 VEEETEYAKTQIILAREYLKDVSISRDQLKYLVMEALRGGCQ 321



 Score = 22.7 bits (47), Expect(2) = 5e-77
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 209 RGIELVILPRSMI 171
           + +ELVILPRS+I
Sbjct: 352 KAVELVILPRSII 364


>emb|CBI17197.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  291 bits (746), Expect(2) = 5e-77
 Identities = 146/162 (90%), Positives = 158/162 (97%)
 Frame = -1

Query: 691 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLSEGVNTVEREGISFRH 512
           EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVL+EGVN VEREGISFRH
Sbjct: 45  EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLAEGVNIVEREGISFRH 104

Query: 511 PCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVAAVGIATKFQECSNEVFKM 332
           PCKPLLIATYNPEEG+VREHLLDR+AINLSADLPMSF++RVAAVGIAT+FQE SNEVF+M
Sbjct: 105 PCKPLLIATYNPEEGAVREHLLDRVAINLSADLPMSFEDRVAAVGIATQFQERSNEVFQM 164

Query: 331 VGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 206
           V EET+ A+TQIILAREYLKDVS+SR+QLKYLVMEALRGGC+
Sbjct: 165 VEEETEYAKTQIILAREYLKDVSISRDQLKYLVMEALRGGCQ 206



 Score = 22.7 bits (47), Expect(2) = 5e-77
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 209 RGIELVILPRSMI 171
           + +ELVILPRS+I
Sbjct: 237 KAVELVILPRSII 249


>ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|222850499|gb|EEE88046.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  286 bits (733), Expect(2) = 1e-75
 Identities = 143/162 (88%), Positives = 156/162 (96%)
 Frame = -1

Query: 691 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLSEGVNTVEREGISFRH 512
           EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVL+EGVN VEREGISFRH
Sbjct: 205 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFRH 264

Query: 511 PCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVAAVGIATKFQECSNEVFKM 332
           PCKPLLIATYNPEEG+VREHLLDRIAINLSADLPM+F++RVAAVGIAT+FQE  NEVFKM
Sbjct: 265 PCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRVAAVGIATQFQEHINEVFKM 324

Query: 331 VGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 206
           V EET+ A+TQIILAREYLKDV++ REQLKYLV+EA+RGGC+
Sbjct: 325 VEEETEYAKTQIILAREYLKDVTIGREQLKYLVLEAIRGGCQ 366



 Score = 22.7 bits (47), Expect(2) = 1e-75
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 209 RGIELVILPRSMI 171
           + +ELVILPRS+I
Sbjct: 397 KAVELVILPRSII 409


>ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative
           [Ricinus communis] gi|223547442|gb|EEF48937.1|
           Magnesium-chelatase subunit chlD, chloroplast precursor,
           putative [Ricinus communis]
          Length = 760

 Score =  286 bits (733), Expect(2) = 1e-75
 Identities = 144/162 (88%), Positives = 156/162 (96%)
 Frame = -1

Query: 691 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLSEGVNTVEREGISFRH 512
           EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVL+EGVN VEREGISFRH
Sbjct: 203 EESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFRH 262

Query: 511 PCKPLLIATYNPEEGSVREHLLDRIAINLSADLPMSFDERVAAVGIATKFQECSNEVFKM 332
           PCKPLLIATYNPEEG+VREHLLDRIAINLSADLPM+F++RVAAVGIAT+FQE   EVFKM
Sbjct: 263 PCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFEDRVAAVGIATQFQEHCTEVFKM 322

Query: 331 VGEETDLARTQIILAREYLKDVSVSREQLKYLVMEALRGGCE 206
           V EET+ A+TQIILAREYLKDV+VSR+QLKYLV+EALRGGC+
Sbjct: 323 VEEETEFAKTQIILAREYLKDVTVSRDQLKYLVLEALRGGCQ 364



 Score = 22.7 bits (47), Expect(2) = 1e-75
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 209 RGIELVILPRSMI 171
           + +ELVILPRS+I
Sbjct: 395 KAVELVILPRSII 407


Top