BLASTX nr result
ID: Coptis24_contig00002740
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002740 (1572 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic ... 106 4e-40 gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK... 105 2e-38 ref|XP_003609971.1| 20 kDa chaperonin [Medicago truncatula] gi|3... 105 2e-38 ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|3... 105 2e-38 ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycin... 102 3e-38 >ref|XP_002276749.1| PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera] gi|50660327|gb|AAT80888.1| chloroplast chaperonin 21 [Vitis vinifera] gi|297738526|emb|CBI27771.3| unnamed protein product [Vitis vinifera] Length = 251 Score = 106 bits (265), Expect(2) = 4e-40 Identities = 52/60 (86%), Positives = 58/60 (96%) Frame = +3 Query: 675 ELEFDGSTHLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKDK 854 E+EF+GS HL+LKEDDIVGILETD+VKDLKPLNDRVLIKVAEAE+KTAGGL LTEASK+K Sbjct: 130 EVEFNGSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEASKEK 189 Score = 86.7 bits (213), Expect(2) = 4e-40 Identities = 45/66 (68%), Positives = 53/66 (80%) Frame = +1 Query: 487 TPTVHFCQALG*QVHVKIKSAEEQTVGGILLPSTAQA*PQGGEVVAVGEGKTLGKNKLEI 666 TP + LG +V VKIK+AEE+TVGGILLP+TAQ PQGGEVVAVGEGKT+GKNKL+I Sbjct: 54 TPKYTSLKPLGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDI 113 Query: 667 SVKNSS 684 VK + Sbjct: 114 CVKTGA 119 >gb|ACJ84537.1| unknown [Medicago truncatula] gi|388500526|gb|AFK38329.1| unknown [Medicago truncatula] Length = 253 Score = 105 bits (262), Expect(2) = 2e-38 Identities = 51/60 (85%), Positives = 58/60 (96%) Frame = +3 Query: 675 ELEFDGSTHLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKDK 854 E+EFDGS HL+LK++DIVGILET+EVKDLKPLNDRVLIKVAEAE+KTAGGL LTEA+KDK Sbjct: 132 EVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKDK 191 Score = 82.0 bits (201), Expect(2) = 2e-38 Identities = 41/54 (75%), Positives = 49/54 (90%) Frame = +1 Query: 514 LG*QVHVKIKSAEEQTVGGILLPSTAQA*PQGGEVVAVGEGKTLGKNKLEISVK 675 LG +V VKIK AEE+T GGILLPSTAQ+ PQGGEVVA+G+GKT+GKNK++ISVK Sbjct: 65 LGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVK 118 >ref|XP_003609971.1| 20 kDa chaperonin [Medicago truncatula] gi|355511026|gb|AES92168.1| 20 kDa chaperonin [Medicago truncatula] Length = 253 Score = 105 bits (262), Expect(2) = 2e-38 Identities = 51/60 (85%), Positives = 58/60 (96%) Frame = +3 Query: 675 ELEFDGSTHLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKDK 854 E+EFDGS HL+LK++DIVGILET+EVKDLKPLNDRVLIKVAEAE+KTAGGL LTEA+KDK Sbjct: 132 EVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKDK 191 Score = 82.0 bits (201), Expect(2) = 2e-38 Identities = 41/54 (75%), Positives = 49/54 (90%) Frame = +1 Query: 514 LG*QVHVKIKSAEEQTVGGILLPSTAQA*PQGGEVVAVGEGKTLGKNKLEISVK 675 LG +V VKIK AEE+T GGILLPSTAQ+ PQGGEVVA+G+GKT+GKNK++ISVK Sbjct: 65 LGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVK 118 >ref|XP_003609972.1| 20 kDa chaperonin [Medicago truncatula] gi|355511027|gb|AES92169.1| 20 kDa chaperonin [Medicago truncatula] Length = 207 Score = 105 bits (262), Expect(2) = 2e-38 Identities = 51/60 (85%), Positives = 58/60 (96%) Frame = +3 Query: 675 ELEFDGSTHLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKDK 854 E+EFDGS HL+LK++DIVGILET+EVKDLKPLNDRVLIKVAEAE+KTAGGL LTEA+KDK Sbjct: 86 EVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKDK 145 Score = 82.0 bits (201), Expect(2) = 2e-38 Identities = 41/54 (75%), Positives = 49/54 (90%) Frame = +1 Query: 514 LG*QVHVKIKSAEEQTVGGILLPSTAQA*PQGGEVVAVGEGKTLGKNKLEISVK 675 LG +V VKIK AEE+T GGILLPSTAQ+ PQGGEVVA+G+GKT+GKNK++ISVK Sbjct: 19 LGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVK 72 >ref|NP_001241427.1| uncharacterized protein LOC100803033 [Glycine max] gi|255645102|gb|ACU23050.1| unknown [Glycine max] Length = 253 Score = 102 bits (254), Expect(3) = 3e-38 Identities = 47/60 (78%), Positives = 58/60 (96%) Frame = +3 Query: 675 ELEFDGSTHLLLKEDDIVGILETDEVKDLKPLNDRVLIKVAEAEQKTAGGLFLTEASKDK 854 E++FDG+ HL++K+DDIVGILETD++KDLKPLNDRVLIKVAEAE+KT+GGL LTEA+KDK Sbjct: 132 EVDFDGTKHLIVKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTSGGLLLTEATKDK 191 Score = 82.8 bits (203), Expect(3) = 3e-38 Identities = 42/57 (73%), Positives = 48/57 (84%) Frame = +1 Query: 514 LG*QVHVKIKSAEEQTVGGILLPSTAQA*PQGGEVVAVGEGKTLGKNKLEISVKNSS 684 LG +V +KIK AEE+T GGILLPSTAQ PQGGEVVAVGEGKT+GKN +EISVK + Sbjct: 65 LGDRVLIKIKEAEEKTEGGILLPSTAQTKPQGGEVVAVGEGKTIGKNNVEISVKTGA 121 Score = 21.9 bits (45), Expect(3) = 3e-38 Identities = 7/10 (70%), Positives = 10/10 (100%) Frame = +2 Query: 494 QYTSVKPLGD 523 +YT++KPLGD Sbjct: 58 KYTAIKPLGD 67