BLASTX nr result

ID: Coptis24_contig00002738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002738
         (2647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   838   0.0  
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   837   0.0  
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   822   0.0  
ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   815   0.0  
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   815   0.0  

>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
            vinifera]
          Length = 622

 Score =  838 bits (2165), Expect = 0.0
 Identities = 433/557 (77%), Positives = 462/557 (82%), Gaps = 2/557 (0%)
 Frame = -2

Query: 2328 MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNR-PPSSDXXXXXX 2155
            MRT+WAD + NS ++N  +G+  ++  G G  SR  RSSYVPPHLRNR P S        
Sbjct: 1    MRTSWADSVANSTSDNLVSGSSDNSGFGAGAPSRSGRSSYVPPHLRNRPPSSDPPAPSYT 60

Query: 2154 XXXXXGNDRSXXXXXXXXXXXXGAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEV 1975
                 G                   R  V                             EV
Sbjct: 61   SQASAGYGGPPGGTRWGGGSRADFGRSGVTTGVTSGGRVGGSSGWNTRSGGWDRGRDREV 120

Query: 1974 NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 1795
            NPFGDDD         EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 121  NPFGDDDNAEPAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 180

Query: 1794 CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRPRGARTV 1615
            CKYVKPTPVQRHAIPISL+G+DLMACAQTGSGKTAAFCFPIISGIMTGQ AQRPRGARTV
Sbjct: 181  CKYVKPTPVQRHAIPISLSGKDLMACAQTGSGKTAAFCFPIISGIMTGQFAQRPRGARTV 240

Query: 1614 FPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPG 1435
            +PLALILSPTRELSCQIH+EA+KFSYQTGV+VVVAYGGAPINQQLR+LERGVDILVATPG
Sbjct: 241  YPLALILSPTRELSCQIHDEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 300

Query: 1434 RLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATF 1255
            RLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP GVRQTMLFSATF
Sbjct: 301  RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATF 360

Query: 1254 PKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTHG 1075
            PKEIQRLASDFL+SYIFLAVGRVGSSTDLIVQRVEFV+ESDKRSHLMDLLHAQR NG HG
Sbjct: 361  PKEIQRLASDFLSSYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHG 420

Query: 1074 KQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVATD 895
            KQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQERE+ALRSFKSG TPILVATD
Sbjct: 421  KQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATD 480

Query: 894  VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAEL 715
            VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENNS++AR LA+L
Sbjct: 481  VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADL 540

Query: 714  MQESNQEVPEWLSRYAA 664
            MQE+NQEVP WL+RYA+
Sbjct: 541  MQEANQEVPAWLTRYAS 557


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
            gi|147854540|emb|CAN78578.1| hypothetical protein
            VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  837 bits (2161), Expect = 0.0
 Identities = 436/558 (78%), Positives = 472/558 (84%), Gaps = 3/558 (0%)
 Frame = -2

Query: 2328 MRTAWAD-ITNSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 2152
            MR++WAD + NSAAEN AAG  SSA+ GV   ++P R +Y+PPHLRN  PSS+       
Sbjct: 1    MRSSWADSVVNSAAENVAAG--SSASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPAYS 58

Query: 2151 XXXXGNDRSXXXXXXXXXXXXGAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVN 1972
                 NDRS              PR D                              EVN
Sbjct: 59   GPSSANDRSGYSGNRWG-----GPRND--SNQTGYSSGGRTGGWNNKSGGWDRGREREVN 111

Query: 1971 PFGDD-DGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 1795
            PFGDD D E V  +  EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNI+R
Sbjct: 112  PFGDDVDTEKVFSE-QENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKR 170

Query: 1794 CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1618
            CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ +QRP RGART
Sbjct: 171  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQASQRPPRGART 230

Query: 1617 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1438
            V+PLALILSPTRELSCQIH+EAKKFSYQTGV+VVVAYGGAPI+QQLRDLERGVDILVATP
Sbjct: 231  VYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPISQQLRDLERGVDILVATP 290

Query: 1437 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1258
            GRLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP+GVRQTMLFSAT
Sbjct: 291  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSAT 350

Query: 1257 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1078
            FPKEIQ+LASDFL++Y+FLAVGRVGSSTDLIVQRVEFV+++DKRSHLMDLLHAQR NG H
Sbjct: 351  FPKEIQKLASDFLSNYVFLAVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVH 410

Query: 1077 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 898
            GKQ LTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQERE ALRSFKSG TPILVAT
Sbjct: 411  GKQYLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVAT 470

Query: 897  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 718
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFN+NNS++A++L+E
Sbjct: 471  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSE 530

Query: 717  LMQESNQEVPEWLSRYAA 664
            LMQE+NQEVP WLSRYAA
Sbjct: 531  LMQEANQEVPAWLSRYAA 548


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 619

 Score =  822 bits (2124), Expect = 0.0
 Identities = 430/558 (77%), Positives = 458/558 (82%), Gaps = 3/558 (0%)
 Frame = -2

Query: 2328 MRTAWADIT-NSAAENTAAGAGSSA-NEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXX 2155
            MRT+WAD+  NSAAEN  AG GSSA N G G+T  P R  YVPPHLRNR P+++      
Sbjct: 1    MRTSWADLAANSAAEN--AGPGSSADNVGTGSTLAPTRPVYVPPHLRNRQPAAESPAPAP 58

Query: 2154 XXXXXGNDRSXXXXXXXXXXXXGAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEV 1975
                  +                APR D                               V
Sbjct: 59   AYSGPSSGAGSSSGAGNSGSRYAAPRNDYRPGYGGGGGRTGGWGNKSGGWDRGRERE--V 116

Query: 1974 NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 1795
            NPF ++D         EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 117  NPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 176

Query: 1794 CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1618
            CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ  QRP RG RT
Sbjct: 177  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRT 236

Query: 1617 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1438
            V+PLAL+LSPTRELS QIHEEA+KFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP
Sbjct: 237  VYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 296

Query: 1437 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1258
            GRLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP G RQTMLFSAT
Sbjct: 297  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSAT 356

Query: 1257 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1078
            FPKEIQRLASDFL++YIFLAVGRVGSSTDLIVQRVE+V ESDKRSHLMDLLHAQR NG  
Sbjct: 357  FPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQ 416

Query: 1077 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 898
            GKQ+LTLVFVETKKGADSLEHWLC+NGFPATTIHGDR+QQERE ALRSFKSG TPILVAT
Sbjct: 417  GKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVAT 476

Query: 897  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 718
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK GLATAFFN+NNS++AR+L+E
Sbjct: 477  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSE 536

Query: 717  LMQESNQEVPEWLSRYAA 664
            LMQE+NQEVP WLSRYAA
Sbjct: 537  LMQEANQEVPAWLSRYAA 554


>ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
            sativus]
          Length = 625

 Score =  815 bits (2104), Expect = 0.0
 Identities = 428/558 (76%), Positives = 458/558 (82%), Gaps = 3/558 (0%)
 Frame = -2

Query: 2328 MRTAWADIT-NSAAENTAAGAGSSANEGVGNTSRPARSSYVPPHLRNRPPSSDXXXXXXX 2152
            MRT+WAD+  +SAAEN AAG  S+ N   G T+ P RS+YVPPHLRNR   +D       
Sbjct: 1    MRTSWADLAASSAAENVAAG--SANNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAANS 58

Query: 2151 XXXXGNDRSXXXXXXXXXXXXGAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-V 1975
                GNDRS              PR D                                V
Sbjct: 59   GPAVGNDRSGHAGSRWGG----GPRNDYNNRSGYSGGSRGGGWGGSRGGGWDRGRGDREV 114

Query: 1974 NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 1795
            NPFGD++         EN+GINFDAYEDIPVETSG+NVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 115  NPFGDEEDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRR 174

Query: 1794 CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1618
            CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ   RP RGART
Sbjct: 175  CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGART 234

Query: 1617 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1438
            V+PLALILSPTRELS QIHEEA+KFSYQTGVRVVVAYGGAPIN QLRDLERGVDILVATP
Sbjct: 235  VYPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATP 294

Query: 1437 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1258
            GRLVDLLERA+VSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP GVRQTMLFSAT
Sbjct: 295  GRLVDLLERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSAT 354

Query: 1257 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1078
            FP+EIQRLASDFL  YIFLAVGRVGSSTDLI QRVEFV+E+DKRSHL+DLLHAQR NG  
Sbjct: 355  FPREIQRLASDFLDKYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQ 414

Query: 1077 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 898
            GKQSLTLVFVETKKGAD+LEHWLC+NGFPATTIHGDRTQQERE ALRSF+SG TPILVAT
Sbjct: 415  GKQSLTLVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVAT 474

Query: 897  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 718
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENN+++ARSLA+
Sbjct: 475  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNASLARSLAD 534

Query: 717  LMQESNQEVPEWLSRYAA 664
            LM ESNQEVPEWL R+AA
Sbjct: 535  LMSESNQEVPEWLIRFAA 552


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine max]
          Length = 614

 Score =  815 bits (2104), Expect = 0.0
 Identities = 427/558 (76%), Positives = 457/558 (81%), Gaps = 3/558 (0%)
 Frame = -2

Query: 2328 MRTAWADIT-NSAAENTAAGAGSSANE-GVGNTSRPARSSYVPPHLRNRPPSSDXXXXXX 2155
            MRT+WAD+  NSAAEN  AG GSSAN  G G+   P R  YVPPHLRNR P+++      
Sbjct: 1    MRTSWADLAANSAAEN--AGPGSSANNVGTGSNLAPTRPVYVPPHLRNRQPAAESPAPAP 58

Query: 2154 XXXXXGNDRSXXXXXXXXXXXXGAPRQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEV 1975
                  +                APR D                               V
Sbjct: 59   AYSGPSSGAGNSGSRYA------APRNDYRPGYGGGGGGRTGGWGNKSGGWDRGRERE-V 111

Query: 1974 NPFGDDDGEPVEPDVSENSGINFDAYEDIPVETSGDNVPPPVNTFADIDLGDALNQNIRR 1795
            NPF ++D         EN+GINFDAYEDIPVETSGDNVPPPVNTFA+IDLG+ALNQNIRR
Sbjct: 112  NPFEEEDNAEEAFSEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRR 171

Query: 1794 CKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTGQIAQRP-RGART 1618
            CKYV+PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIM GQ  QRP RG RT
Sbjct: 172  CKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRPPRGVRT 231

Query: 1617 VFPLALILSPTRELSCQIHEEAKKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 1438
            V+PLAL+LSPTRELS QIHEEA+KFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP
Sbjct: 232  VYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATP 291

Query: 1437 GRLVDLLERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 1258
            GRLVDLLERARVSL+MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPP G RQTMLFSAT
Sbjct: 292  GRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSAT 351

Query: 1257 FPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFVNESDKRSHLMDLLHAQRENGTH 1078
            FPKEIQRLASDFL++YIFLAVGRVGSSTDLIVQRVE+V ESDKRSHLMDLLHAQR NG  
Sbjct: 352  FPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQ 411

Query: 1077 GKQSLTLVFVETKKGADSLEHWLCMNGFPATTIHGDRTQQEREYALRSFKSGTTPILVAT 898
            GKQ+LTLVFVETKKGADSLEHWLC+NGFPATTIHGDR+QQERE ALRSFKSG TPILVAT
Sbjct: 412  GKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVAT 471

Query: 897  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSNMARSLAE 718
            DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK GLATAFFN+NNS++AR+L+E
Sbjct: 472  DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSE 531

Query: 717  LMQESNQEVPEWLSRYAA 664
            LMQE+NQEVP WLSR+AA
Sbjct: 532  LMQEANQEVPAWLSRFAA 549


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