BLASTX nr result

ID: Coptis24_contig00002733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002733
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271154.1| PREDICTED: universal stress protein A-like p...   111   7e-23
ref|XP_003616191.1| Universal stress protein A-like protein [Med...    96   3e-18
ref|XP_002327479.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002528512.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
ref|XP_002884367.1| universal stress protein family protein [Ara...    91   1e-16

>ref|XP_002271154.1| PREDICTED: universal stress protein A-like protein [Vitis vinifera]
           gi|297738156|emb|CBI27357.3| unnamed protein product
           [Vitis vinifera]
          Length = 164

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/78 (65%), Positives = 66/78 (84%)
 Frame = +1

Query: 4   VGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVLSPKLDPPQKRLWEDTGSPLIPLD 183
           +G GMDNS +SKSAL+WAVDNL  +D  D +I +YV SPK + P+K+L+EDTGSPL+PL+
Sbjct: 7   IGVGMDNSANSKSALRWAVDNL--IDAEDCLILIYVQSPKSEHPKKQLFEDTGSPLVPLE 64

Query: 184 EFREINVSKQYGITPDPE 237
           EFR+IN+SKQYG+ PDPE
Sbjct: 65  EFRDINLSKQYGLNPDPE 82


>ref|XP_003616191.1| Universal stress protein A-like protein [Medicago truncatula]
           gi|355517526|gb|AES99149.1| Universal stress protein
           A-like protein [Medicago truncatula]
           gi|388504360|gb|AFK40246.1| unknown [Medicago
           truncatula]
          Length = 166

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/78 (61%), Positives = 58/78 (74%)
 Frame = +1

Query: 4   VGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVLSPKLDPPQKRLWEDTGSPLIPLD 183
           VG  MD SP+SK AL+WAVDNL  ++ NDQII + V  P  D  +K L+EDTGSPL+PL+
Sbjct: 7   VGVAMDFSPTSKLALRWAVDNL--INKNDQIIMINVQPPSADHTRKELFEDTGSPLVPLE 64

Query: 184 EFREINVSKQYGITPDPE 237
           E REIN +KQYGI  DPE
Sbjct: 65  ELREINFTKQYGIAKDPE 82


>ref|XP_002327479.1| predicted protein [Populus trichocarpa] gi|222836033|gb|EEE74454.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/77 (57%), Positives = 59/77 (76%)
 Frame = +1

Query: 7   GTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVLSPKLDPPQKRLWEDTGSPLIPLDE 186
           G GMD SP+SK+AL+WA +NL  +D  D++I +    PK D  +K+L+E+ GSPL+PL+E
Sbjct: 8   GVGMDFSPTSKAALRWAAENL--IDEGDRVILIQAQPPKADHTRKQLFEENGSPLVPLEE 65

Query: 187 FREINVSKQYGITPDPE 237
           FREIN SKQYG+T DPE
Sbjct: 66  FREINYSKQYGLTHDPE 82


>ref|XP_002528512.1| conserved hypothetical protein [Ricinus communis]
           gi|223532072|gb|EEF33881.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = +1

Query: 4   VGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVLSPKLDPPQKRLWEDTGSPLIPLD 183
           VG  MD SP+SK+AL+WA +NL  +D  D ++ + V  PK D  +K+L+E TGSPL+PL+
Sbjct: 7   VGIAMDYSPTSKAALRWAAENL--IDSGDMVVLIQVQPPKADHTRKQLFEATGSPLVPLE 64

Query: 184 EFREINVSKQYGITPDPE 237
           EFREIN SKQYG++ DPE
Sbjct: 65  EFREINYSKQYGLSRDPE 82


>ref|XP_002884367.1| universal stress protein family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330207|gb|EFH60626.1| universal stress
           protein family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 159

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = +1

Query: 4   VGTGMDNSPSSKSALQWAVDNLNFVDGNDQIIALYVLSPKLDPPQKRLWEDTGSPLIPLD 183
           VG GMD SP+SK AL+WA +NL  ++  D +I ++V     D  +K L+EDTGSPL+PL+
Sbjct: 7   VGVGMDYSPTSKLALRWAAENL--LEDGDTVILIHVQPQNADHTRKILFEDTGSPLVPLE 64

Query: 184 EFREINVSKQYGITPDPE 237
           EFREIN+SKQYG+  DPE
Sbjct: 65  EFREINLSKQYGLAYDPE 82


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