BLASTX nr result

ID: Coptis24_contig00002728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002728
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524081.1| conserved hypothetical protein [Ricinus comm...    53   2e-07

>ref|XP_002524081.1| conserved hypothetical protein [Ricinus communis]
           gi|223536649|gb|EEF38291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 773

 Score = 52.8 bits (125), Expect(2) = 2e-07
 Identities = 24/33 (72%), Positives = 26/33 (78%)
 Frame = -1

Query: 483 KGLMDSTPLHHRLQIEFHYTEFLQPTPEPQAVE 385
           KGLM STPLH RLQIEFHYT+ LQ  PE +A E
Sbjct: 723 KGLMASTPLHQRLQIEFHYTQLLQALPETRAAE 755



 Score = 28.9 bits (63), Expect(2) = 2e-07
 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = -3

Query: 766 QLLEGKTAADQKTVAV-VEGRNGQVQQTNNLKETPVTMQP-VAKPXXXXXXXXXXEVVCR 593
           +L + KT  DQ+ VAV VE +  +V    NLKE      P V KP          E VCR
Sbjct: 641 RLSDEKTTNDQQIVAVAVEPKKLEV----NLKEEASVSGPAVIKPEEPMKGEDEGEEVCR 696

Query: 592 GKES 581
           GK+S
Sbjct: 697 GKDS 700


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