BLASTX nr result

ID: Coptis24_contig00002721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002721
         (1968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280924.1| PREDICTED: ethylene-responsive transcription...    78   1e-11
emb|CAN73076.1| hypothetical protein VITISV_032388 [Vitis vinifera]    78   1e-11
ref|XP_002517034.1| conserved hypothetical protein [Ricinus comm...    62   6e-07
ref|XP_002314658.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-07
ref|XP_002312563.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-06

>ref|XP_002280924.1| PREDICTED: ethylene-responsive transcription factor ERF114-like
            [Vitis vinifera]
          Length = 315

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
 Frame = +2

Query: 1706 KAFKVDRRHGKRPLPSDASEEKAEENNLSFPSYPSLRSDQDMTAMVSALARIIDTGQDNP 1885
            +A+KVDRRHGKRPLPSD +EEK +++++ FP Y S RS QDM+AMVSAL ++I     NP
Sbjct: 31   EAYKVDRRHGKRPLPSDEAEEKEDQDHI-FPVY-SARSQQDMSAMVSALTQVIGNTDKNP 88

Query: 1886 SNAQGDVVPAPEPASR--EIDPSHLVQDQ 1966
             +  G+  P    ++      PS L+QDQ
Sbjct: 89   LHDLGNPSPISHHSATTPHDQPSQLLQDQ 117


>emb|CAN73076.1| hypothetical protein VITISV_032388 [Vitis vinifera]
          Length = 304

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
 Frame = +2

Query: 1706 KAFKVDRRHGKRPLPSDASEEKAEENNLSFPSYPSLRSDQDMTAMVSALARIIDTGQDNP 1885
            +A+KVDRRHGKRPLPSD +EEK +++++ FP Y S RS QDM+AMVSAL ++I     NP
Sbjct: 38   EAYKVDRRHGKRPLPSDEAEEKEDQDHI-FPVY-SARSQQDMSAMVSALTQVIGNTDKNP 95

Query: 1886 SNAQGDVVPAPEPASR--EIDPSHLVQDQ 1966
             +  G+  P    ++      PS L+QDQ
Sbjct: 96   LHDLGNPSPISHHSATTPHDQPSQLLQDQ 124


>ref|XP_002517034.1| conserved hypothetical protein [Ricinus communis]
           gi|223543669|gb|EEF45197.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 511 LETCIGDLEIAKFGLYVSVPIVLMYYFAINTKNMQKFMGN 392
           L T  G LEIAKFG+YV+VPI+LMY FA NTKN+QKFMGN
Sbjct: 4   LGTSKGILEIAKFGVYVTVPIILMYTFANNTKNLQKFMGN 43


>ref|XP_002314658.1| predicted protein [Populus trichocarpa] gi|222863698|gb|EEF00829.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 511 LETCIGDLEIAKFGLYVSVPIVLMYYFAINTKNMQKFMGN 392
           L T  G LEIAKFG+YV+VP+VLMY FA NTKN+QKFMGN
Sbjct: 4   LGTSKGILEIAKFGVYVTVPVVLMYAFANNTKNLQKFMGN 43


>ref|XP_002312563.1| predicted protein [Populus trichocarpa] gi|222852383|gb|EEE89930.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -3

Query: 511 LETCIGDLEIAKFGLYVSVPIVLMYYFAINTKNMQKFMGN 392
           L T  G LEIAKFG+YV+VPIVLMY FA NT N+QKFMGN
Sbjct: 26  LGTSKGILEIAKFGIYVTVPIVLMYSFANNTNNLQKFMGN 65


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