BLASTX nr result

ID: Coptis24_contig00002720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002720
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304640.1| AP2/ERF domain-containing transcription fact...   175   1e-41
ref|XP_002297877.1| AP2/ERF domain-containing transcription fact...   157   3e-36
ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, puta...   155   1e-35
gb|ACO55953.1| RAP2-like protein [Juglans nigra]                      154   2e-35
gb|ADJ67443.1| ethylene response factor 14 [Actinidia deliciosa]      153   4e-35

>ref|XP_002304640.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222842072|gb|EEE79619.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 234

 Score =  175 bits (443), Expect = 1e-41
 Identities = 90/147 (61%), Positives = 99/147 (67%), Gaps = 9/147 (6%)
 Frame = -2

Query: 839 VQDQGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKG 660
           VQDQ    RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT           AL+FKG
Sbjct: 44  VQDQENTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKG 103

Query: 659 TKAKLNFPERVQGRSELSYYLGR-QDTNTVVERVPDSVIPQPP--------FSHDAYPGL 507
           TKAKLNFPERVQGR+E  YY+G    TN + E+ P  V P PP        F+ D YP L
Sbjct: 104 TKAKLNFPERVQGRTEFGYYMGSGTSTNVLTEQSPRPVAPPPPPPPPPPSSFAPDTYPDL 163

Query: 506 LQYAQLLSSRDEDVQYVTPNFYNNQQF 426
           LQYAQ+LSS D +  Y T N +N Q F
Sbjct: 164 LQYAQILSSNDANFPYYTSNLFNQQPF 190


>ref|XP_002297877.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222845135|gb|EEE82682.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 231

 Score =  157 bits (397), Expect = 3e-36
 Identities = 83/143 (58%), Positives = 94/143 (65%), Gaps = 5/143 (3%)
 Frame = -2

Query: 839 VQDQGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKG 660
           VQDQ    RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT           AL+FKG
Sbjct: 44  VQDQENTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKG 103

Query: 659 TKAKLNFPERVQGRSELSYYLGR-QDTNTVVERVPDSVIPQPP----FSHDAYPGLLQYA 495
           +KAKLNFPERV    E  Y++     +N + E+ P  V P PP    F+ D YP LLQYA
Sbjct: 104 SKAKLNFPERVH---EFGYFMSSGASSNVMTEQNPRPVAPPPPPPSSFAPDTYPDLLQYA 160

Query: 494 QLLSSRDEDVQYVTPNFYNNQQF 426
           Q+LSS D +  Y T N +N Q F
Sbjct: 161 QILSSNDANFPYYTSNLFNQQPF 183


>ref|XP_002512669.1| AP2 domain transcription factor RAP2.3, putative [Ricinus communis]
           gi|223548630|gb|EEF50121.1| AP2 domain transcription
           factor RAP2.3, putative [Ricinus communis]
          Length = 249

 Score =  155 bits (392), Expect = 1e-35
 Identities = 81/150 (54%), Positives = 94/150 (62%), Gaps = 13/150 (8%)
 Frame = -2

Query: 836 QDQGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKGT 657
           QDQ    RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT           AL+FKGT
Sbjct: 47  QDQENTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDKAALKFKGT 106

Query: 656 KAKLNFPERVQGRSELSYYLGRQDTNT----------VVERVPDSVIPQPP---FSHDAY 516
           KAKLNFPERVQG+ E SY++     ++          ++     S +P PP   F  + Y
Sbjct: 107 KAKLNFPERVQGKPEFSYFMTTSGDSSSSISPGQNPMLMAPPASSYLPPPPPPSFPQETY 166

Query: 515 PGLLQYAQLLSSRDEDVQYVTPNFYNNQQF 426
           P LLQYAQ+LSS D    Y T N +N Q +
Sbjct: 167 PDLLQYAQILSSTDASFPYYTSNLFNQQPY 196


>gb|ACO55953.1| RAP2-like protein [Juglans nigra]
          Length = 226

 Score =  154 bits (389), Expect = 2e-35
 Identities = 83/145 (57%), Positives = 93/145 (64%), Gaps = 7/145 (4%)
 Frame = -2

Query: 839 VQDQGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFKG 660
           VQDQ    RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+T           ALRFKG
Sbjct: 47  VQDQENARRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDRAALRFKG 106

Query: 659 TKAKLNFPERVQGRSELSYYLGRQDTNTVVERV----PDSVIPQPPFS---HDAYPGLLQ 501
           TKAKLNFPERVQG SE  Y  G  +T+     V    P  V+  PP +      +PGL Q
Sbjct: 107 TKAKLNFPERVQGTSEFGYPSGFGNTSVSQSAVPVQNPRPVVNPPPSTLPQESTFPGLYQ 166

Query: 500 YAQLLSSRDEDVQYVTPNFYNNQQF 426
           YAQLLSS D +  Y T + +N + F
Sbjct: 167 YAQLLSSSDVEFPYYTSSLFNQESF 191


>gb|ADJ67443.1| ethylene response factor 14 [Actinidia deliciosa]
          Length = 235

 Score =  153 bits (387), Expect = 4e-35
 Identities = 80/149 (53%), Positives = 94/149 (63%), Gaps = 9/149 (6%)
 Frame = -2

Query: 842 LVQDQGTQTRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXALRFK 663
           ++QDQG   +RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+T           ALRFK
Sbjct: 24  IMQDQGNVGKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDEAALRFK 83

Query: 662 GTKAKLNFPERVQGRSELSYYLGRQDTNTVVERVPDSVIPQPP---------FSHDAYPG 510
           GTKAKLNFPE+VQ ++E +Y      T    +R+ +  +P PP          S + YP 
Sbjct: 84  GTKAKLNFPEKVQAKTEYAYLTA--STTHGEDRISNPYVPPPPPAPPLPDSMSSQETYPD 141

Query: 509 LLQYAQLLSSRDEDVQYVTPNFYNNQQFV 423
           L QYAQLLSS D D  Y +   YN   FV
Sbjct: 142 LFQYAQLLSSSDADFPYFSSALYNQHPFV 170


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