BLASTX nr result

ID: Coptis24_contig00002719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002719
         (2301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300534.1| predicted protein [Populus trichocarpa] gi|2...   125   6e-26
gb|AER42647.1| GTL1 [Populus tremula x Populus alba]                  122   3e-25
ref|XP_002518968.1| transcription factor, putative [Ricinus comm...   118   6e-24
dbj|BAJ85645.1| predicted protein [Hordeum vulgare subsp. vulgar...   117   1e-23
gb|EEE51268.1| hypothetical protein OsJ_32161 [Oryza sativa Japo...   117   1e-23

>ref|XP_002300534.1| predicted protein [Populus trichocarpa] gi|222847792|gb|EEE85339.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  125 bits (313), Expect = 6e-26
 Identities = 65/82 (79%), Positives = 67/82 (81%)
 Frame = -2

Query: 314 MMEFFEGLMKQVMDKQEVMQQRFLETIEKREQDRMIREEAWKRQEMARLTREHEIMAQEX 135
           MMEFFEGLMKQVM KQE MQQRFLE IEKREQDRMIR+EAWKRQEMARL+REHEIMAQE 
Sbjct: 286 MMEFFEGLMKQVMQKQEAMQQRFLEAIEKREQDRMIRDEAWKRQEMARLSREHEIMAQER 345

Query: 134 XXXXXXXXXXXAFLQKITGQTI 69
                      AFLQKITGQTI
Sbjct: 346 SISASRDAAIVAFLQKITGQTI 367



 Score = 92.4 bits (228), Expect = 5e-16
 Identities = 43/44 (97%), Positives = 43/44 (97%)
 Frame = -3

Query: 1060 YTRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEAL 929
            Y RSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEAL
Sbjct: 103  YKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEAL 146


>gb|AER42647.1| GTL1 [Populus tremula x Populus alba]
          Length = 795

 Score =  122 bits (307), Expect = 3e-25
 Identities = 64/82 (78%), Positives = 66/82 (80%)
 Frame = -2

Query: 314 MMEFFEGLMKQVMDKQEVMQQRFLETIEKREQDRMIREEAWKRQEMARLTREHEIMAQEX 135
           MMEFFEGLMKQVM KQE MQQRFLE IEKREQDRMIR+EAWKRQEMAR +REHEIMAQE 
Sbjct: 334 MMEFFEGLMKQVMQKQEAMQQRFLEAIEKREQDRMIRDEAWKRQEMARSSREHEIMAQER 393

Query: 134 XXXXXXXXXXXAFLQKITGQTI 69
                      AFLQKITGQTI
Sbjct: 394 SISASRDAAIVAFLQKITGQTI 415



 Score = 91.3 bits (225), Expect = 1e-15
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = -3

Query: 1060 YTRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEAL 929
            Y RSAKKCKEKFENVHKYYKRTK+GRAGRQDGKSYRFFSQLEAL
Sbjct: 150  YKRSAKKCKEKFENVHKYYKRTKDGRAGRQDGKSYRFFSQLEAL 193


>ref|XP_002518968.1| transcription factor, putative [Ricinus communis]
           gi|223541955|gb|EEF43501.1| transcription factor,
           putative [Ricinus communis]
          Length = 741

 Score =  118 bits (296), Expect = 6e-24
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = -2

Query: 314 MMEFFEGLMKQVMDKQEVMQQRFLETIEKREQDRMIREEAWKRQEMARLTREHEIMAQEX 135
           MM+FFEGLMK VM KQE MQQRFL+ IEKRE DR++REEAWKRQEMARL+REHE+MAQE 
Sbjct: 294 MMDFFEGLMKHVMQKQEAMQQRFLDAIEKRENDRVVREEAWKRQEMARLSREHELMAQER 353

Query: 134 XXXXXXXXXXXAFLQKITGQTIQ 66
                      +F+QKITGQTIQ
Sbjct: 354 AISASRDAAIVSFIQKITGQTIQ 376



 Score = 91.7 bits (226), Expect = 8e-16
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = -3

Query: 1060 YTRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEALH 926
            Y RSAKKCKEKFENVHKYYKRTKEGR GRQDGK+YRFF+QLEALH
Sbjct: 123  YKRSAKKCKEKFENVHKYYKRTKEGRGGRQDGKTYRFFTQLEALH 167


>dbj|BAJ85645.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326519971|dbj|BAK03910.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326520696|dbj|BAJ92711.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 840

 Score =  117 bits (293), Expect = 1e-23
 Identities = 59/82 (71%), Positives = 65/82 (79%)
 Frame = -2

Query: 314 MMEFFEGLMKQVMDKQEVMQQRFLETIEKREQDRMIREEAWKRQEMARLTREHEIMAQEX 135
           MM FFEGLMKQVM++QE MQQRFLE IEKREQDRMIREEAW+RQEMARL RE EI+AQE 
Sbjct: 309 MMRFFEGLMKQVMERQEAMQQRFLEAIEKREQDRMIREEAWRRQEMARLAREQEILAQER 368

Query: 134 XXXXXXXXXXXAFLQKITGQTI 69
                      +F+QKITGQTI
Sbjct: 369 AMAATRDAAVLSFIQKITGQTI 390



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -3

Query: 1060 YTRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEALH 926
            Y R+AKKCKEKFENVHKYYKRTK+ RAGR DGK+YRFF QLEALH
Sbjct: 150  YRRNAKKCKEKFENVHKYYKRTKDSRAGRNDGKAYRFFRQLEALH 194


>gb|EEE51268.1| hypothetical protein OsJ_32161 [Oryza sativa Japonica Group]
          Length = 746

 Score =  117 bits (293), Expect = 1e-23
 Identities = 59/82 (71%), Positives = 65/82 (79%)
 Frame = -2

Query: 314 MMEFFEGLMKQVMDKQEVMQQRFLETIEKREQDRMIREEAWKRQEMARLTREHEIMAQEX 135
           MM FFEGLMKQVM++QE MQQRFLE IEKREQDRMIREEAW+RQEMARL RE EI+AQE 
Sbjct: 250 MMRFFEGLMKQVMERQEAMQQRFLEAIEKREQDRMIREEAWRRQEMARLAREQEILAQER 309

Query: 134 XXXXXXXXXXXAFLQKITGQTI 69
                      +F+QKITGQTI
Sbjct: 310 AMAASRDAAVVSFIQKITGQTI 331



 Score = 89.0 bits (219), Expect = 5e-15
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -3

Query: 1060 YTRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFSQLEALH 926
            Y RSAKKCKEKFENVHKYYKRTKE RAGR DGK+YRFF+QLEALH
Sbjct: 99   YRRSAKKCKEKFENVHKYYKRTKESRAGRNDGKTYRFFTQLEALH 143


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