BLASTX nr result

ID: Coptis24_contig00002717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002717
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510977.1| ribosomal protein L15, putative [Ricinus com...   358   1e-96
ref|XP_002301250.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96
gb|ACF06610.1| ribosomal protein L15 [Elaeis guineensis]              357   2e-96
gb|ACF06564.1| ribosomal protein L15 [Elaeis guineensis]              356   4e-96
ref|XP_002327273.1| predicted protein [Populus trichocarpa] gi|1...   355   9e-96

>ref|XP_002510977.1| ribosomal protein L15, putative [Ricinus communis]
           gi|223550092|gb|EEF51579.1| ribosomal protein L15,
           putative [Ricinus communis]
          Length = 204

 Score =  358 bits (919), Expect = 1e-96
 Identities = 174/204 (85%), Positives = 179/204 (87%)
 Frame = +2

Query: 80  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQXXX 259
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVTRPTRPDKARR+GYKAKQ   
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRMGYKAKQGYV 60

Query: 260 XXXXXXXXXXXXXXXXXXIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLKVLNSYW 439
                             IVYGKP NQG+TQLKFQR+KRSVAEERAGRKLGGLKVLNSYW
Sbjct: 61  IYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYW 120

Query: 440 INEDSTYKYFEVILVDAAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 619
           INEDSTYKYFEVILVDAAHNA+RNDPRINWIC PVHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 620 HTKARPSRRATWKRNNTLSLRRYR 691
           H KARPSRRATWKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNNTLSLRRYR 204


>ref|XP_002301250.1| predicted protein [Populus trichocarpa]
           gi|224137010|ref|XP_002327000.1| predicted protein
           [Populus trichocarpa] gi|222835315|gb|EEE73750.1|
           predicted protein [Populus trichocarpa]
           gi|222842976|gb|EEE80523.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score =  358 bits (919), Expect = 1e-96
 Identities = 175/204 (85%), Positives = 178/204 (87%)
 Frame = +2

Query: 80  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQXXX 259
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVT PTRPDKARRLGYKAKQ   
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 260 XXXXXXXXXXXXXXXXXXIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLKVLNSYW 439
                             IVYGKP NQG+TQLKFQR+KRSVAEERAGRKLGGLKVLNSYW
Sbjct: 61  VYRIRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYW 120

Query: 440 INEDSTYKYFEVILVDAAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 619
           INEDSTYKYFEVILVDAAHNA+RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL
Sbjct: 121 INEDSTYKYFEVILVDAAHNAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 620 HTKARPSRRATWKRNNTLSLRRYR 691
           H KARPSRRATWKRN TLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNQTLSLRRYR 204


>gb|ACF06610.1| ribosomal protein L15 [Elaeis guineensis]
          Length = 204

 Score =  357 bits (917), Expect = 2e-96
 Identities = 174/204 (85%), Positives = 178/204 (87%)
 Frame = +2

Query: 80  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQXXX 259
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQ   
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYV 60

Query: 260 XXXXXXXXXXXXXXXXXXIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLKVLNSYW 439
                             IVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGL+VLNSYW
Sbjct: 61  IYRIRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYW 120

Query: 440 INEDSTYKYFEVILVDAAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 619
           +NEDSTYKYFEVILVDAAHNA+RNDPRINWIC  VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 VNEDSTYKYFEVILVDAAHNAIRNDPRINWICKGVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 620 HTKARPSRRATWKRNNTLSLRRYR 691
           H K RPSRRATWKRN TLSLRRYR
Sbjct: 181 HHKVRPSRRATWKRNQTLSLRRYR 204


>gb|ACF06564.1| ribosomal protein L15 [Elaeis guineensis]
          Length = 204

 Score =  356 bits (914), Expect = 4e-96
 Identities = 175/204 (85%), Positives = 178/204 (87%)
 Frame = +2

Query: 80  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQXXX 259
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQ   
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYV 60

Query: 260 XXXXXXXXXXXXXXXXXXIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLKVLNSYW 439
                             IVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGL+VLNSYW
Sbjct: 61  IYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYW 120

Query: 440 INEDSTYKYFEVILVDAAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 619
           INEDSTYKYFEVILVDAAHNA+RND RINWIC  VHKHRELRGLTSAGKKYRGLRG+GHL
Sbjct: 121 INEDSTYKYFEVILVDAAHNAIRNDSRINWICKGVHKHRELRGLTSAGKKYRGLRGKGHL 180

Query: 620 HTKARPSRRATWKRNNTLSLRRYR 691
           H KARPSRRATWKRN TLSLRRYR
Sbjct: 181 HHKARPSRRATWKRNQTLSLRRYR 204


>ref|XP_002327273.1| predicted protein [Populus trichocarpa] gi|118483198|gb|ABK93503.1|
           unknown [Populus trichocarpa]
           gi|222835643|gb|EEE74078.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score =  355 bits (911), Expect = 9e-96
 Identities = 172/204 (84%), Positives = 177/204 (86%)
 Frame = +2

Query: 80  MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQXXX 259
           MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVT PTRPDKARRLGYKAKQ   
Sbjct: 1   MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTHPTRPDKARRLGYKAKQGYV 60

Query: 260 XXXXXXXXXXXXXXXXXXIVYGKPKNQGITQLKFQRNKRSVAEERAGRKLGGLKVLNSYW 439
                             IVYGKP NQG+TQLKFQR+KRSVAEERAGRKLGGL+VLNSYW
Sbjct: 61  VYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYW 120

Query: 440 INEDSTYKYFEVILVDAAHNAVRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHL 619
           INEDSTYKYFEVILVD AHNA+RNDPRINW+CNPVHKHRELRGLTSAGKKYRGLRGRGHL
Sbjct: 121 INEDSTYKYFEVILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHL 180

Query: 620 HTKARPSRRATWKRNNTLSLRRYR 691
           H KARPSRRA WKRNNTLSLRRYR
Sbjct: 181 HHKARPSRRANWKRNNTLSLRRYR 204


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