BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002715
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...   162   1e-37
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]   161   2e-37
gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So...   160   5e-37
gb|AFW90624.1| photosystem I reaction center V (chloroplast) [So...   158   2e-36
gb|AFS88925.1| chloroplast photosystem I reaction center subunit...   155   1e-35

>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score =  162 bits (410), Expect = 1e-37
 Identities = 92/142 (64%), Positives = 101/142 (71%)
 Frame = -3

Query: 768 SATGLLSTPTTAFANNNKQTYNHLQHHCGFQGLRPLNKPTDTSFANTXXXXXXXXXXXAL 589
           +++   S PT + A    Q   HL H   FQGLRPL+KPTD S                 
Sbjct: 35  ASSAFFSAPTFSSAATTLQ--KHLPHQ-SFQGLRPLSKPTDLSLTIPRMSTRPIP----- 86

Query: 588 ERKQRRGGVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGVTHFEAGDT 409
             K+  G VRAELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD+
Sbjct: 87  --KRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDS 144

Query: 408 RAKEYVSLLKSNDPVGFNIVDV 343
           RAKEYVSLLKSNDPVGFNIVDV
Sbjct: 145 RAKEYVSLLKSNDPVGFNIVDV 166


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score =  161 bits (408), Expect = 2e-37
 Identities = 92/142 (64%), Positives = 101/142 (71%)
 Frame = -3

Query: 768 SATGLLSTPTTAFANNNKQTYNHLQHHCGFQGLRPLNKPTDTSFANTXXXXXXXXXXXAL 589
           +++   S PT + A    Q   HL H   FQGLRPL+KPTD S                 
Sbjct: 2   ASSAFFSAPTFSSAATTLQ--KHLPHQY-FQGLRPLSKPTDLSLTIPRMSTRPIP----- 53

Query: 588 ERKQRRGGVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGVTHFEAGDT 409
             K+  G VRAELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD+
Sbjct: 54  --KRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDS 111

Query: 408 RAKEYVSLLKSNDPVGFNIVDV 343
           RAKEYVSLLKSNDPVGFNIVDV
Sbjct: 112 RAKEYVSLLKSNDPVGFNIVDV 133


>gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  160 bits (405), Expect = 5e-37
 Identities = 84/114 (73%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
 Frame = -3

Query: 681 FQGLRPLNKPTDTS-FANTXXXXXXXXXXXALERKQRRGGVRAELNPSLVISLSTGLSLF 505
           FQGLRPLNKPTD+S F N             + +K R   V+AELNPS+VISLSTGLSLF
Sbjct: 11  FQGLRPLNKPTDSSLFLNKPIAFKP------ITKKTRNLAVKAELNPSIVISLSTGLSLF 64

Query: 504 LGRFVFFNFQRENVAKQVPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDV 343
           LGRFVFFNFQRENVAKQVP QNG++HFEAGD RAKEY+SLLKSNDPVGFNIVDV
Sbjct: 65  LGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDV 118


>gb|AFW90624.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  158 bits (400), Expect = 2e-36
 Identities = 83/114 (72%), Positives = 92/114 (80%), Gaps = 1/114 (0%)
 Frame = -3

Query: 681 FQGLRPLNKPTDTS-FANTXXXXXXXXXXXALERKQRRGGVRAELNPSLVISLSTGLSLF 505
           FQGLRPLNKPTD+S F N             + +K R   V+AELNPS+VISLSTGLSLF
Sbjct: 11  FQGLRPLNKPTDSSLFLNKPIAFKP------ITKKTRNLAVKAELNPSIVISLSTGLSLF 64

Query: 504 LGRFVFFNFQRENVAKQVPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDV 343
           LGRFVFFNFQRENVAKQVP Q+G++HFEAGD RAKEY+SLLKSNDPVGFNIVDV
Sbjct: 65  LGRFVFFNFQRENVAKQVPSQDGISHFEAGDVRAKEYISLLKSNDPVGFNIVDV 118


>gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB
           Group] gi|421958217|gb|AFX72947.1| photosystem I
           reaction center subunit V-2 [Musa AB Group]
          Length = 160

 Score =  155 bits (393), Expect = 1e-35
 Identities = 87/115 (75%), Positives = 94/115 (81%), Gaps = 2/115 (1%)
 Frame = -3

Query: 681 FQGLRPLNKPTDTS-FANTXXXXXXXXXXXALERKQRRGGVRAELNPSLVISLSTGLSLF 505
           F+GLRPL KPTD+S F  T            + R ++ GG+RAELNPSLVISLSTGLSLF
Sbjct: 24  FRGLRPL-KPTDSSQFPQTRAISIKP-----VRRVRKPGGIRAELNPSLVISLSTGLSLF 77

Query: 504 LGRFVFFNFQRENVAKQ-VPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDV 343
           LGRFVFFNFQRENVAKQ +PEQNGVTHFEAGDTRAKEYV LLKSNDPVGFNIVDV
Sbjct: 78  LGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLLKSNDPVGFNIVDV 132