BLASTX nr result

ID: Coptis24_contig00002713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002713
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33828.1| unnamed protein product [Thellungiella halophila]     347   1e-93
ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [V...   347   1e-93
gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]                 347   1e-93
emb|CAN82189.1| hypothetical protein VITISV_031114 [Vitis vinifera]   347   1e-93
ref|NP_189353.1| chloride channel protein CLC-b [Arabidopsis tha...   346   2e-93

>dbj|BAJ33828.1| unnamed protein product [Thellungiella halophila]
          Length = 363

 Score =  347 bits (890), Expect = 1e-93
 Identities = 169/206 (82%), Positives = 178/206 (86%)
 Frame = +2

Query: 2   GPGIPEIKAYLNGVDTPNMFGAPQLVVKIIGSICAVSAGLDLGKEGPLVHIGSCIASLLG 181
           GPGIPEIKAYLNGVDTPNMFGA  + VKIIGSI AV+AGLDLGKEGPLVHIGSCIASLLG
Sbjct: 158 GPGIPEIKAYLNGVDTPNMFGATTMFVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLG 217

Query: 182 QGGPDKHRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSA 361
           QGGPD HR+KWRWLRYFNNDRDRRDLITCG+ASGVCAAFRSPVGGVLFALEEVATWWRSA
Sbjct: 218 QGGPDNHRIKWRWLRYFNNDRDRRDLITCGSASGVCAAFRSPVGGVLFALEEVATWWRSA 277

Query: 362 LLWRTFFSTAVVVVVLRAFMEYCNTGSCGLFGKGGLIMFDVSGVTVTHHATDXXXXXXXX 541
           LLWRTFFSTAVVVVVLRAF+E CN+G CGLFGKGGLIMFDVS V V +HA D        
Sbjct: 278 LLWRTFFSTAVVVVVLRAFIEICNSGKCGLFGKGGLIMFDVSHVEVRYHAADIIPVTLIG 337

Query: 542 XXXXXXXXXYNYLLHKVLRLYNLINE 619
                    YN+LLHKVLRLYNLIN+
Sbjct: 338 VFGGILGSLYNHLLHKVLRLYNLINQ 363


>ref|XP_002273594.2| PREDICTED: chloride channel protein CLC-b [Vitis vinifera]
           gi|296082356|emb|CBI21361.3| unnamed protein product
           [Vitis vinifera]
          Length = 789

 Score =  347 bits (889), Expect = 1e-93
 Identities = 166/206 (80%), Positives = 180/206 (87%)
 Frame = +2

Query: 2   GPGIPEIKAYLNGVDTPNMFGAPQLVVKIIGSICAVSAGLDLGKEGPLVHIGSCIASLLG 181
           GPGIPEIKAYLNGVDTPNMFGA  L+VKI GSI AVSAGLDLGKEGPLVHIGSCIASLLG
Sbjct: 166 GPGIPEIKAYLNGVDTPNMFGASTLIVKIFGSIGAVSAGLDLGKEGPLVHIGSCIASLLG 225

Query: 182 QGGPDKHRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSA 361
           QGGP+ +R+KWRWLRYFNNDRDRRDLITCGA+SGVCAAFR+PVGGVLF+LEEVATWWRSA
Sbjct: 226 QGGPENYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSA 285

Query: 362 LLWRTFFSTAVVVVVLRAFMEYCNTGSCGLFGKGGLIMFDVSGVTVTHHATDXXXXXXXX 541
           LLWRTFFSTAVV VVLRAF+EYCN+G CGLFG+GGLIMFDVS VTVT+HA D        
Sbjct: 286 LLWRTFFSTAVVAVVLRAFIEYCNSGKCGLFGRGGLIMFDVSDVTVTYHAMDIAPVALIG 345

Query: 542 XXXXXXXXXYNYLLHKVLRLYNLINE 619
                    YN+LLHKVLR+YNLIN+
Sbjct: 346 LIGGVLGSLYNHLLHKVLRVYNLINQ 371


>gb|ADK66982.1| chloride channel ClC4 [Vitis vinifera]
          Length = 789

 Score =  347 bits (889), Expect = 1e-93
 Identities = 166/206 (80%), Positives = 180/206 (87%)
 Frame = +2

Query: 2   GPGIPEIKAYLNGVDTPNMFGAPQLVVKIIGSICAVSAGLDLGKEGPLVHIGSCIASLLG 181
           GPGIPEIKAYLNGVDTPNMFGA  L+VKI GSI AVSAGLDLGKEGPLVHIGSCIASLLG
Sbjct: 166 GPGIPEIKAYLNGVDTPNMFGASTLIVKIFGSIGAVSAGLDLGKEGPLVHIGSCIASLLG 225

Query: 182 QGGPDKHRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSA 361
           QGGP+ +R+KWRWLRYFNNDRDRRDLITCGA+SGVCAAFR+PVGGVLF+LEEVATWWRSA
Sbjct: 226 QGGPENYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSA 285

Query: 362 LLWRTFFSTAVVVVVLRAFMEYCNTGSCGLFGKGGLIMFDVSGVTVTHHATDXXXXXXXX 541
           LLWRTFFSTAVV VVLRAF+EYCN+G CGLFG+GGLIMFDVS VTVT+HA D        
Sbjct: 286 LLWRTFFSTAVVAVVLRAFIEYCNSGKCGLFGRGGLIMFDVSDVTVTYHAMDIAPVALIG 345

Query: 542 XXXXXXXXXYNYLLHKVLRLYNLINE 619
                    YN+LLHKVLR+YNLIN+
Sbjct: 346 LIGGVLGSLYNHLLHKVLRVYNLINQ 371


>emb|CAN82189.1| hypothetical protein VITISV_031114 [Vitis vinifera]
          Length = 753

 Score =  347 bits (889), Expect = 1e-93
 Identities = 166/206 (80%), Positives = 180/206 (87%)
 Frame = +2

Query: 2   GPGIPEIKAYLNGVDTPNMFGAPQLVVKIIGSICAVSAGLDLGKEGPLVHIGSCIASLLG 181
           GPGIPEIKAYLNGVDTPNMFGA  L+VKI GSI AVSAGLDLGKEGPLVHIGSCIASLLG
Sbjct: 161 GPGIPEIKAYLNGVDTPNMFGASTLIVKIFGSIGAVSAGLDLGKEGPLVHIGSCIASLLG 220

Query: 182 QGGPDKHRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSA 361
           QGGP+ +R+KWRWLRYFNNDRDRRDLITCGA+SGVCAAFR+PVGGVLF+LEEVATWWRSA
Sbjct: 221 QGGPENYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSA 280

Query: 362 LLWRTFFSTAVVVVVLRAFMEYCNTGSCGLFGKGGLIMFDVSGVTVTHHATDXXXXXXXX 541
           LLWRTFFSTAVV VVLRAF+EYCN+G CGLFG+GGLIMFDVS VTVT+HA D        
Sbjct: 281 LLWRTFFSTAVVAVVLRAFIEYCNSGKCGLFGRGGLIMFDVSDVTVTYHAMDIAPVALIG 340

Query: 542 XXXXXXXXXYNYLLHKVLRLYNLINE 619
                    YN+LLHKVLR+YNLIN+
Sbjct: 341 LIGGVLGSLYNHLLHKVLRVYNLINQ 366


>ref|NP_189353.1| chloride channel protein CLC-b [Arabidopsis thaliana]
           gi|41688457|sp|P92942.1|CLCB_ARATH RecName:
           Full=Chloride channel protein CLC-b; Short=AtCLC-b;
           AltName: Full=CBS domain-containing protein CBSCLC7
           gi|1742955|emb|CAA96058.1| CLC-b chloride channel
           protein [Arabidopsis thaliana]
           gi|9294082|dbj|BAB01934.1| CLC-d chloride channel; anion
           channel protein [Arabidopsis thaliana]
           gi|17064884|gb|AAL32596.1| CLC-d chloride channel; anion
           channel protein [Arabidopsis thaliana]
           gi|332643754|gb|AEE77275.1| chloride channel protein
           CLC-b [Arabidopsis thaliana]
          Length = 780

 Score =  346 bits (888), Expect = 2e-93
 Identities = 167/206 (81%), Positives = 178/206 (86%)
 Frame = +2

Query: 2   GPGIPEIKAYLNGVDTPNMFGAPQLVVKIIGSICAVSAGLDLGKEGPLVHIGSCIASLLG 181
           GPGIPEIKAYLNGVDTPNMFGA  ++VKI+GSI AV+AGLDLGKEGPLVHIGSCIASLLG
Sbjct: 158 GPGIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLG 217

Query: 182 QGGPDKHRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSA 361
           QGG D HR+KWRWLRYFNNDRDRRDLITCG+A+GVCAAFRSPVGGVLFALEEVATWWRSA
Sbjct: 218 QGGTDNHRIKWRWLRYFNNDRDRRDLITCGSAAGVCAAFRSPVGGVLFALEEVATWWRSA 277

Query: 362 LLWRTFFSTAVVVVVLRAFMEYCNTGSCGLFGKGGLIMFDVSGVTVTHHATDXXXXXXXX 541
           LLWRTFFSTAVVVVVLR F+E CN+G CGLFGKGGLIMFDVS VT T+H TD        
Sbjct: 278 LLWRTFFSTAVVVVVLREFIEICNSGKCGLFGKGGLIMFDVSHVTYTYHVTDIIPVMLIG 337

Query: 542 XXXXXXXXXYNYLLHKVLRLYNLINE 619
                    YN+LLHKVLRLYNLINE
Sbjct: 338 VIGGILGSLYNHLLHKVLRLYNLINE 363


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