BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002698
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ...    97   1e-18
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...    97   1e-18
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]         97   1e-18
ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arab...    94   2e-17
emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]                       93   3e-17

>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
           gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
           Full=Ran-binding protein 1 homolog c
           gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
           [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
           At5g58590 [Arabidopsis thaliana]
           gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
           [Arabidopsis thaliana]
          Length = 219

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   TVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDSK 179
           TVKLL HK TGKVRL+MR SK+LKI ANH ISSGM V   + N  SC+W A DFS+G+ K
Sbjct: 72  TVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELK 131

Query: 180 EKLFRIQFGSVDNCDTFM 233
           ++LF I+F S++NC TFM
Sbjct: 132 DELFCIRFASIENCKTFM 149


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   TVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDSK 179
           TVKLL HK TGKVRL+MR SK+LKI ANH ISSGM V   + N  SC+W A DFS+G+ K
Sbjct: 72  TVKLLKHKQTGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELK 131

Query: 180 EKLFRIQFGSVDNCDTFM 233
           ++LF I+F S++NC TFM
Sbjct: 132 DELFCIRFASIENCKTFM 149


>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 248

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   TVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDSK 179
           TVKLL HK TGKVRL+MR SK+LKI ANH ISSGM V   + N  SC+W A DFS+G+ K
Sbjct: 72  TVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELK 131

Query: 180 EKLFRIQFGSVDNCDTFM 233
           ++LF I+F S++NC TFM
Sbjct: 132 DELFCIRFASIENCKTFM 149


>ref|XP_002892383.1| hypothetical protein ARALYDRAFT_334013 [Arabidopsis lyrata subsp.
           lyrata] gi|297338225|gb|EFH68642.1| hypothetical protein
           ARALYDRAFT_334013 [Arabidopsis lyrata subsp. lyrata]
          Length = 705

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   TVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDSK 179
           TVKLL HK TGK+RL+MR SK+LKI ANH + SGM V     N  SCVW A DF++G+ K
Sbjct: 550 TVKLLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELK 609

Query: 180 EKLFRIQFGSVDNCDTFM 233
           ++LF I+F S++NC TFM
Sbjct: 610 DELFCIRFASIENCKTFM 627


>emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]
          Length = 217

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   TVKLLNHKITGKVRLIMR-SKSLKIYANHRISSGMLVDVCTSNSTSCVWAAPDFSEGDSK 179
           TVK + H+++GK+RL+MR SK+LKI ANH + SGM V     N  SCVW A DFS+G+ K
Sbjct: 75  TVKFVKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELK 134

Query: 180 EKLFRIQFGSVDNCDTFM 233
           ++LF I+FGSV+NC  FM
Sbjct: 135 DELFCIRFGSVENCKAFM 152