BLASTX nr result
ID: Coptis24_contig00002694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002694
(2005 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-bi... 691 0.0
ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-bi... 686 0.0
emb|CBI23009.3| unnamed protein product [Vitis vinifera] 683 0.0
ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subun... 682 0.0
ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arab... 677 0.0
>ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Vitis vinifera]
Length = 577
Score = 691 bits (1783), Expect = 0.0
Identities = 360/430 (83%), Positives = 391/430 (90%), Gaps = 1/430 (0%)
Frame = +1
Query: 52 KDGCWGGANMGNDFPTPKEICQGLDKFVIGQERAKKVLSVAVYNHYKRIYFESQPKCAEG 231
KD WGG+N+G++FPTPKEIC+GLDKFVIGQERAKKVLSVAVYNHYKRIY +S KC +
Sbjct: 150 KDESWGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKC-DD 208
Query: 232 STNGEDNDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 411
DNDSVELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV
Sbjct: 209 KAEATDNDSVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 268
Query: 412 ESILYKLLMVADYNVEAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 591
ESILYKLLMVADYNV AAQQGIVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT
Sbjct: 269 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGT 328
Query: 592 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR 771
VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR
Sbjct: 329 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR 388
Query: 772 TGGLTNAAITSSLLETVESSDLIAYGLIPEFVGRFPVLVSLSALSEDQLVQVLIEPKNAL 951
TGG T+AA+ SSLLETVESSDLI+YGLIPEFVGRFP+LVSLSAL+E+QLV+VL EPKNAL
Sbjct: 389 TGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNAL 448
Query: 952 GKQYRKMFQMNDVKLHFTEVALRLIARKAMARSTGARGLRSLLENILMDAMYEIPDLETG 1131
GKQY+KMFQMN VKLHFT+ ALRLI+RKAM+++TGARGLRS+LENILM+AMYEIPD+ TG
Sbjct: 449 GKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGLRSILENILMNAMYEIPDVRTG 508
Query: 1132 KDKIDAVVVDEEAVGSMERSGCGAKILYGDGAFELYLSQQKSKEFETREEG-SERMPDAE 1308
D IDAVVVD+EAVGS + G GAKILYG GA + YLSQ K KE ET EG S+ +AE
Sbjct: 509 NDIIDAVVVDDEAVGS-DGHGFGAKILYGKGALDCYLSQHKLKETETPMEGSSDGEAEAE 567
Query: 1309 PELPSIVVSM 1338
E+PSIV SM
Sbjct: 568 AEIPSIVASM 577
>ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Vitis vinifera]
Length = 583
Score = 686 bits (1771), Expect = 0.0
Identities = 360/435 (82%), Positives = 392/435 (90%), Gaps = 6/435 (1%)
Frame = +1
Query: 52 KDGCWGGANMGNDFPTPKEICQGLDKFVIGQERAKKVLSVAVYNHYKRIYFESQPKCAEG 231
KD WGG+N+G++FPTPKEIC+GLDKFVIGQERAKKVLSVAVYNHYKRIY +S K
Sbjct: 150 KDESWGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAE 209
Query: 232 STNGE-----DNDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 396
T+ + DNDSVELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY
Sbjct: 210 DTSDDKAEATDNDSVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 269
Query: 397 VGEDVESILYKLLMVADYNVEAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 576
VGEDVESILYKLLMVADYNV AAQQGIVYIDEVDKITKKAESLN+SRDVSGEGVQQALLK
Sbjct: 270 VGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLK 329
Query: 577 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 756
MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV
Sbjct: 330 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 389
Query: 757 RANMRTGGLTNAAITSSLLETVESSDLIAYGLIPEFVGRFPVLVSLSALSEDQLVQVLIE 936
RANMRTGG T+AA+ SSLLETVESSDLI+YGLIPEFVGRFP+LVSLSAL+E+QLV+VL E
Sbjct: 390 RANMRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTE 449
Query: 937 PKNALGKQYRKMFQMNDVKLHFTEVALRLIARKAMARSTGARGLRSLLENILMDAMYEIP 1116
PKNALGKQY+KMFQMN VKLHFT+ ALRLI+RKAM+++TGARGLRS+LENILM+AMYEIP
Sbjct: 450 PKNALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGLRSILENILMNAMYEIP 509
Query: 1117 DLETGKDKIDAVVVDEEAVGSMERSGCGAKILYGDGAFELYLSQQKSKEFETREEG-SER 1293
D+ TG D IDAVVVD+EAVGS + G GAKILYG GA + YLSQ K KE ET EG S+
Sbjct: 510 DVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILYGKGALDCYLSQHKLKETETPMEGSSDG 568
Query: 1294 MPDAEPELPSIVVSM 1338
+AE E+PSIV SM
Sbjct: 569 EAEAEAEIPSIVASM 583
>emb|CBI23009.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 683 bits (1763), Expect = 0.0
Identities = 359/435 (82%), Positives = 391/435 (89%), Gaps = 6/435 (1%)
Frame = +1
Query: 52 KDGCWGGANMGNDFPTPKEICQGLDKFVIGQERAKKVLSVAVYNHYKRIYFESQPKCAEG 231
KD WGG+N+G++FPTPKEIC+GLDKFVIGQERAKKVLSVAVYNHYKRIY +S K
Sbjct: 150 KDESWGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAE 209
Query: 232 STNGE-----DNDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 396
T+ + DNDSVELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA Y
Sbjct: 210 DTSDDKAEATDNDSVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQARY 269
Query: 397 VGEDVESILYKLLMVADYNVEAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 576
VGEDVESILYKLLMVADYNV AAQQGIVYIDEVDKITKKAESLN+SRDVSGEGVQQALLK
Sbjct: 270 VGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLK 329
Query: 577 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 756
MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV
Sbjct: 330 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 389
Query: 757 RANMRTGGLTNAAITSSLLETVESSDLIAYGLIPEFVGRFPVLVSLSALSEDQLVQVLIE 936
RANMRTGG T+AA+ SSLLETVESSDLI+YGLIPEFVGRFP+LVSLSAL+E+QLV+VL E
Sbjct: 390 RANMRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTE 449
Query: 937 PKNALGKQYRKMFQMNDVKLHFTEVALRLIARKAMARSTGARGLRSLLENILMDAMYEIP 1116
PKNALGKQY+KMFQMN VKLHFT+ ALRLI+RKAM+++TGARGLRS+LENILM+AMYEIP
Sbjct: 450 PKNALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGLRSILENILMNAMYEIP 509
Query: 1117 DLETGKDKIDAVVVDEEAVGSMERSGCGAKILYGDGAFELYLSQQKSKEFETREEG-SER 1293
D+ TG D IDAVVVD+EAVGS + G GAKILYG GA + YLSQ K KE ET EG S+
Sbjct: 510 DVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILYGKGALDCYLSQHKLKETETPMEGSSDG 568
Query: 1294 MPDAEPELPSIVVSM 1338
+AE E+PSIV SM
Sbjct: 569 EAEAEAEIPSIVASM 583
>ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis] gi|223544165|gb|EEF45689.1|
ATP-dependent clp protease ATP-binding subunit clpx,
putative [Ricinus communis]
Length = 565
Score = 682 bits (1759), Expect = 0.0
Identities = 351/434 (80%), Positives = 388/434 (89%), Gaps = 5/434 (1%)
Frame = +1
Query: 52 KDGCWGGANMGNDFPTPKEICQGLDKFVIGQERAKKVLSVAVYNHYKRIYFESQPKCAEG 231
KDGCWGG+++GN+FPTPKEIC+GLDKFVIGQ+RAKKVLSVAVYNHYKRIY +S K + G
Sbjct: 133 KDGCWGGSDLGNNFPTPKEICRGLDKFVIGQDRAKKVLSVAVYNHYKRIYHDSIQKWSAG 192
Query: 232 STNGE-----DNDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 396
+ D D VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY
Sbjct: 193 DSGNNKAEAMDEDGVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 252
Query: 397 VGEDVESILYKLLMVADYNVEAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 576
VGEDVESILYKLLM ADYNV AAQQGIVYIDEVDKITKKAES+NISRDVSGEGVQQALLK
Sbjct: 253 VGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLK 312
Query: 577 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 756
MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV
Sbjct: 313 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 372
Query: 757 RANMRTGGLTNAAITSSLLETVESSDLIAYGLIPEFVGRFPVLVSLSALSEDQLVQVLIE 936
RANMR G +T+AA+TSSLLETVES DLI+YGLIPEFVGRFPVLVSLSAL+E+QLVQVL E
Sbjct: 373 RANMRMGSVTSAAVTSSLLETVESGDLISYGLIPEFVGRFPVLVSLSALTENQLVQVLTE 432
Query: 937 PKNALGKQYRKMFQMNDVKLHFTEVALRLIARKAMARSTGARGLRSLLENILMDAMYEIP 1116
PKNALGKQY+KMFQMN V+LHFTE ALRLIA+KA+ ++TGARGLR++LENILMDAMYEIP
Sbjct: 433 PKNALGKQYKKMFQMNGVRLHFTENALRLIAKKAITKNTGARGLRAILENILMDAMYEIP 492
Query: 1117 DLETGKDKIDAVVVDEEAVGSMERSGCGAKILYGDGAFELYLSQQKSKEFETREEGSERM 1296
D++TG+D IDAVVVDEEAVG+ E G G +ILYG GA + YL++ K K+ E +GS+
Sbjct: 493 DVKTGEDIIDAVVVDEEAVGT-EGCGTGGRILYGKGALDRYLAENKLKDSERTVDGSDGD 551
Query: 1297 PDAEPELPSIVVSM 1338
P+ E EL SIV SM
Sbjct: 552 PEVETELSSIVASM 565
>ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata] gi|297310072|gb|EFH40496.1| hypothetical protein
ARALYDRAFT_918413 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 677 bits (1747), Expect = 0.0
Identities = 349/435 (80%), Positives = 386/435 (88%), Gaps = 6/435 (1%)
Frame = +1
Query: 52 KDGCWGGANMGNDFPTPKEICQGLDKFVIGQERAKKVLSVAVYNHYKRIYFESQPKCAEG 231
K+ CWGG+N+G+DFPTPKEIC+GL+KFVIGQERAKKVLSVAVYNHYKRIY ES K + G
Sbjct: 138 KEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAG 197
Query: 232 STNGE-----DNDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 396
T+ D+D VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY
Sbjct: 198 ETDSTAVKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGY 257
Query: 397 VGEDVESILYKLLMVADYNVEAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 576
VGEDVESILYKLL VADYNV AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK
Sbjct: 258 VGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 317
Query: 577 MLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPV 756
MLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EKTISERR DSSIGFGAPV
Sbjct: 318 MLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPV 377
Query: 757 RANMRTGGLTNAAITSSLLETVESSDLIAYGLIPEFVGRFPVLVSLSALSEDQLVQVLIE 936
RANMR GG+TNAA+ S+L+ETVESSDLIAYGLIPEFVGRFPVLVSLSAL+E+QL+QVL E
Sbjct: 378 RANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTE 437
Query: 937 PKNALGKQYRKMFQMNDVKLHFTEVALRLIARKAMARSTGARGLRSLLENILMDAMYEIP 1116
PKNALGKQY+KM+QMN VKLHFTE ALRLIARKA+ ++TGARGLRSLLE+ILMD+MYEIP
Sbjct: 438 PKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRSLLESILMDSMYEIP 497
Query: 1117 DLETGKDKIDAVVVDEEAVGSMERSGCGAKILYGDGAFELYLSQQKSKEF-ETREEGSER 1293
D TG D I+AVVVDEEAV R G GAKIL G GA YLS+ KSK+ +T ++GS+
Sbjct: 498 DESTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALGRYLSETKSKDSPQTTKDGSDG 557
Query: 1294 MPDAEPELPSIVVSM 1338
+ E E+PS+V SM
Sbjct: 558 ETEVEAEIPSVVASM 572