BLASTX nr result

ID: Coptis24_contig00002690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002690
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330535.1| predicted protein [Populus trichocarpa] gi|2...   138   3e-30
ref|XP_002300589.1| predicted protein [Populus trichocarpa] gi|2...   128   3e-27
emb|CBI39858.3| unnamed protein product [Vitis vinifera]              127   5e-27
ref|XP_002265097.1| PREDICTED: WPP domain-interacting protein 2-...   125   2e-26
ref|XP_002531762.1| conserved hypothetical protein [Ricinus comm...   113   7e-23

>ref|XP_002330535.1| predicted protein [Populus trichocarpa] gi|222872093|gb|EEF09224.1|
            predicted protein [Populus trichocarpa]
          Length = 643

 Score =  138 bits (347), Expect = 3e-30
 Identities = 102/285 (35%), Positives = 147/285 (51%), Gaps = 1/285 (0%)
 Frame = +3

Query: 159  TSSGMKSENVVIYEKPRLQKNGDLMVKSLISLQSLEDVLEKEIQKFKKIGSVSVALSDNF 338
            T  G KS+N     +P   +  D  V+S++SLQS++  LE E++K  +IG VS  + D+ 
Sbjct: 374  TDKGEKSDN----HQPSADQ--DPFVESILSLQSVQKALENEVKKLGEIGKVSSVVEDSS 427

Query: 339  RTDPSFAKEAVFTDPTTQDANLADEVHFLEDGQDALQLTKHNGEVHIXXXXXXXXXXXXX 518
              +P   K ++   P   D+    E + LE     L LT+    V               
Sbjct: 428  SANPEIQKSSL---PNQFDSESIKESNSLEFR--VLSLTQ---TVQYLESRLEEAKAMIK 479

Query: 519  XXXXXXXXXXXXXXXXXXXQKASVSTFQFLQDKYREMEVELEGVLKQKIEVELEYLLVVG 698
                               ++ S ST +  Q+KYRE+E ELEG+ KQKIE E+E+L  + 
Sbjct: 480  VKELRVAELEATLNGDRSPKEESASTTELQQEKYREIENELEGLFKQKIEAEIEHL-ALA 538

Query: 699  ATQRLNVAFEDQISLFEDQKSLAGEQIKMLHKLRDAEHKAILLKTQAEELEASCQELLVT 878
            + Q+L VA  DQI+LFE+Q++LAGEQ++ML+KL +A +KA  LK QAEELE  C ++L T
Sbjct: 539  SLQKLGVAAGDQITLFEEQEALAGEQVQMLNKLGEAGNKAASLKKQAEELEKYCGDVLGT 598

Query: 879  EKVLKVQNRLYKYTFYFTAQ-XXXXXXXXXXXXXXRPQTSVVVPT 1010
            E+V K+QN++ K    F  Q                P   VVVPT
Sbjct: 599  EEVFKMQNKVCKVAACFLIQLILLILVFWLLVLQLSPYCGVVVPT 643


>ref|XP_002300589.1| predicted protein [Populus trichocarpa] gi|222847847|gb|EEE85394.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  128 bits (321), Expect = 3e-27
 Identities = 81/230 (35%), Positives = 123/230 (53%)
 Frame = +3

Query: 225 DLMVKSLISLQSLEDVLEKEIQKFKKIGSVSVALSDNFRTDPSFAKEAVFTDPTTQDANL 404
           D  V+S++SLQS++  LE E+QK  +IG VS  + D+   DP   + ++        ++ 
Sbjct: 317 DQWVESILSLQSVQKALENEVQKLGEIGKVSSVVEDSSLADPEIHESSL--------SDK 368

Query: 405 ADEVHFLEDGQDALQLTKHNGEVHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKA 584
            D   F E      Q+      V                                  ++ 
Sbjct: 369 FDSESFKESSSLEFQVLSLTQNVKYLESSLELTKAMLKMKETVVAELEASLNGDKSPKEE 428

Query: 585 SVSTFQFLQDKYREMEVELEGVLKQKIEVELEYLLVVGATQRLNVAFEDQISLFEDQKSL 764
           S ST +  Q+K RE+E ELEG+ KQKIE E++ L +    Q+L +A  DQI+LFE+Q++L
Sbjct: 429 SASTAELQQEKSREIENELEGLFKQKIEAEIKCLALTRNLQKLRLAAGDQITLFEEQQAL 488

Query: 765 AGEQIKMLHKLRDAEHKAILLKTQAEELEASCQELLVTEKVLKVQNRLYK 914
           AGEQ++ML+KL +AE KA  LK QAE+LE  C ++L TE+V K+Q+++ K
Sbjct: 489 AGEQVQMLNKLGEAEIKAASLKKQAEQLEKYCGDVLGTEEVFKMQSKVCK 538


>emb|CBI39858.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  127 bits (319), Expect = 5e-27
 Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 11/299 (3%)
 Frame = +3

Query: 147  NCKETSSGMKSENVVIYEKPRLQK--------NGDLMVKSLISLQSLEDVLEKEIQKFKK 302
            N    S+G +S  +  Y+    +K        + D +V S+++LQS+++ LE+E+QKF +
Sbjct: 217  NFSANSNGKQSGTLTNYDGENKEKGETDQPLIDQDPLVDSILALQSVQEALEREVQKFGE 276

Query: 303  IGSVSVALSDNFRTDPSFAKEAVFTDPTTQDANLADEVHFLEDGQDA---LQLTKHNGEV 473
            I    +++ ++   D S A  A    P   +A+ + ++   E  Q     ++   H+ + 
Sbjct: 277  IAKEPISVCNSSIKDSSSADFASM-GPEIHEASSSCQLSSEETRQSDSCFMETQMHSLKQ 335

Query: 474  HIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKASVSTFQFLQDKYREMEVELEGVL 653
            +I                                 + S S  +  Q + REME ELE + 
Sbjct: 336  NISSLESKLEEATAMLKVKEYRIVEL---------EESGSAIELQQKQCREMETELEDLF 386

Query: 654  KQKIEVELEYLLVVGATQRLNVAFEDQISLFEDQKSLAGEQIKMLHKLRDAEHKAILLKT 833
            KQKIE E+EYL +    Q+L     DQI ++E+QK+LAGEQ +ML+KL +AE KA +LK 
Sbjct: 387  KQKIEAEVEYLTLTRTIQKLRAG--DQIMIYEEQKALAGEQAQMLNKLGEAEGKAAMLKK 444

Query: 834  QAEELEASCQELLVTEKVLKVQNRLYKYTFYFTAQXXXXXXXXXXXXXXRPQTSVVVPT 1010
            QAE+LE  C ++L +E+V+K++ RL K T  F  Q               P +SVVVPT
Sbjct: 445  QAEKLETYCGDILGSEEVMKMEKRLCKVTLCFLIQLLLLLAFGLFVFQLPPHSSVVVPT 503


>ref|XP_002265097.1| PREDICTED: WPP domain-interacting protein 2-like [Vitis vinifera]
          Length = 614

 Score =  125 bits (314), Expect = 2e-26
 Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
 Frame = +3

Query: 225  DLMVKSLISLQSLEDVLEKEIQKFKKIGSVSVALSDNFRTDPSFAKEAVFTDPTTQDANL 404
            D +V S+++LQS+++ LE+E+QKF +I    +++ ++   D S A  A    P   +A+ 
Sbjct: 362  DPLVDSILALQSVQEALEREVQKFGEIAKEPISVCNSSIKDSSSADFASM-GPEIHEASS 420

Query: 405  ADEVHFLEDGQDA---LQLTKHNGEVHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
            + ++   E  Q     ++   H+ + +I                                
Sbjct: 421  SCQLSSEETRQSDSCFMETQMHSLKQNISSLESKLEEATAMLKVKEYRIVEL-------- 472

Query: 576  QKASVSTFQFLQDKYREMEVELEGVLKQKIEVELEYLLVVGATQRLNVAFEDQISLFEDQ 755
             + S S  +  Q + REME ELE + KQKIE E+EYL +    Q+L     DQI ++E+Q
Sbjct: 473  -EESGSAIELQQKQCREMETELEDLFKQKIEAEVEYLTLTRTIQKLRAG--DQIMIYEEQ 529

Query: 756  KSLAGEQIKMLHKLRDAEHKAILLKTQAEELEASCQELLVTEKVLKVQNRLYKYTFYFTA 935
            K+LAGEQ +ML+KL +AE KA +LK QAE+LE  C ++L +E+V+K++ RL K T  F  
Sbjct: 530  KALAGEQAQMLNKLGEAEGKAAMLKKQAEKLETYCGDILGSEEVMKMEKRLCKVTLCFLI 589

Query: 936  QXXXXXXXXXXXXXXRPQTSVVVPT 1010
            Q               P +SVVVPT
Sbjct: 590  QLLLLLAFGLFVFQLPPHSSVVVPT 614


>ref|XP_002531762.1| conserved hypothetical protein [Ricinus communis]
            gi|223528598|gb|EEF30618.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 652

 Score =  113 bits (283), Expect = 7e-23
 Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
 Frame = +3

Query: 585  SVSTFQFLQDKYREMEVELEGVLKQKIEVELEYLLVVGATQRLNVAFEDQISLFEDQKSL 764
            S +  +  Q+K RE+E ELEG+ KQKIE E+EYL +    Q+L VA  DQ++LFE Q++L
Sbjct: 510  SANNIELQQEKSREIETELEGIFKQKIEAEVEYLTLTKTIQKLRVAAGDQMTLFEQQENL 569

Query: 765  AGEQIKMLHKLRDAEHKAILLKTQAEELEASCQELLVTEKVLKVQNRLYKYTFYFTAQ-X 941
            AGEQ++ML K+ +AE KA +L  Q EE+E    ++L TE+VL++Q R+ K T  F  Q  
Sbjct: 570  AGEQVQMLDKIGEAERKAAMLMKQVEEVEKYRGDILGTEEVLRMQRRVCKVTSCFFMQLV 629

Query: 942  XXXXXXXXXXXXXRPQTSVVVPT 1010
                          PQ+ VVVPT
Sbjct: 630  LLILVFLLLVLHLSPQSGVVVPT 652


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