BLASTX nr result

ID: Coptis24_contig00002681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002681
         (3018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...   626   e-177
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ...   607   e-171
ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|2...   575   e-161
ref|XP_002324006.1| predicted protein [Populus trichocarpa] gi|2...   572   e-160
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin...   539   e-150

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like [Vitis
            vinifera]
          Length = 948

 Score =  626 bits (1615), Expect = e-177
 Identities = 380/814 (46%), Positives = 479/814 (58%), Gaps = 24/814 (2%)
 Frame = +1

Query: 472  IEPKSSALNQGALSPVGG-SDPDEKEVSXXXXXXRNHKHRRRETRSQSFDKDAPGQPFRQ 648
            +E K S+     LSP  G SDP+EKE+S      RNHKHRRRETRSQS ++D+  Q   +
Sbjct: 1    MELKVSSPKPSGLSPSDGESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQVLSR 60

Query: 649  TNRKRNKPSENGQGFFRNDPQTSEIQREGNPTSLGRDLSARVGKKRAGLGPFVRTGFDLG 828
              RKRNKP ENG  F  ND Q+S   +  N + + +D S +  K+R GL  F R   DL 
Sbjct: 61   PYRKRNKPFENGHSFRENDSQSSGSWKNYNISPMEKDFSGKFEKRRPGLATFARAPLDLN 120

Query: 829  LRAGLNQAFHGDPVTHFDVSXXXXXXXXXXXXXXXSGPWNQHDLKFSSAETLDFASQMPL 1008
             R  +NQ+F GD                        G WNQ D +FS    +D ASQM  
Sbjct: 121  QRTRMNQSFSGDS-------------GPVRGRGRDPGSWNQRDPRFSQ---VDIASQMVQ 164

Query: 1009 LCPPPSSLFTGRGL-----------HPFGMIPGMPNGVLDSLHPLGSQ------MNHSVG 1137
               PP  L+ GRGL             FG++PG+PNG LDSLH LG Q      ++ S+ 
Sbjct: 165  GSIPPG-LYAGRGLPNVSNTQNASWSGFGLLPGIPNGALDSLHSLGLQGTLRPPLSTSLN 223

Query: 1138 ICIPHQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSIPSSHQGG--AG 1311
              IP QRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVS+PS+H  G  AG
Sbjct: 224  KSIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPAG 283

Query: 1312 AVSAHTGGGPSSLQGNGKFSLSKNSKHGIGDDGFCINRXXXXXXXXXEADLYDPDQPLWN 1491
                 +   P S   N K   +K+ K  + +D   +N           A+LYDPDQPLWN
Sbjct: 284  PGPLPSVNAPPSTLMNSKGFQNKSGKPEVAEDELGLNGAFSGSAVGGGAELYDPDQPLWN 343

Query: 1492 NDHPERSSALSGLSSAKVDDAEPIWNGDLSDRHSFILSDGFDVEQSGRXXXXXXXXXXXX 1671
            ND PE  SAL  L S K+D+ E + + + SDR+   L DG D  +  +            
Sbjct: 344  NDCPETPSALLALHSPKIDETECLLDANSSDRYHARLCDGSDNGRPVKNTGTTVGSQSTN 403

Query: 1672 XXXWGRIRDGGSKLNAKGNFDTNIGSMGYHKNETKQEK-VLSSVLGATRQKKQFASEENG 1848
               WGRI     +L AK   D+ I S  Y +NE K+++  L+SV G +RQ K+   E+ G
Sbjct: 404  VSVWGRIGGAKDRLEAKEKIDSVISSSDYLENEGKEDQEALTSVQGTSRQGKRIIVEDIG 463

Query: 1849 PKAMNLSSNHRLRTEPTHSNGRTSQKALRTLFVNGIPLKENKREALLSHFQKFGEIIDIY 2028
             K ++LSS  R +++   +  + SQKALRTLFVNGIP K N++EALLSHF+KFGE+IDIY
Sbjct: 464  SKNVDLSS--RTQSDAMRNIRKPSQKALRTLFVNGIPQKNNRKEALLSHFRKFGEVIDIY 521

Query: 2029 IPLNSEKAFVQFSKRDEAESALKAPDAVMGNRFVKLWWANRDSIPDNGLSINNTISAATQ 2208
            IPLNSE+AFVQFSKR+EAE+AL+APDAVMGNRF+KLWWANRDS+PD+ +S  N  S    
Sbjct: 522  IPLNSERAFVQFSKREEAEAALQAPDAVMGNRFIKLWWANRDSVPDDSISGGNGASVIPH 581

Query: 2209 -VVAASILPQSSVVDREKESRLAAVPKFNAAPLSDVPASTAVASL-LVTNAPKVTLS-QX 2379
             V AAS+    S V+R K++  +A PK NA    D P+ T+  S  +VTN PK     Q 
Sbjct: 582  GVTAASVPSHPSAVNRAKDNLQSAAPKVNAVHAIDAPSPTSDHSKPIVTNGPKAPPPLQK 641

Query: 2380 XXXXXXXXXXXXRIKQEMLDKKRNDFRRQLNRLEKQAFTVQSEPTTEQAAKRHKVGMGTD 2559
                        R KQEMLD+KRNDFRRQL++LEKQA  ++ E   EQAAKR KVG+  D
Sbjct: 642  KLESLELMKEELRKKQEMLDQKRNDFRRQLDKLEKQATGLKGEVGAEQAAKRPKVGIVGD 701

Query: 2560 IVKTATPSPINSITAECQPGSVKTVEKELSEESIVSPSSKTGATLVLQSPSSLKHPTRPS 2739
              K ATP   +   A   P +  T++K  S E++V  SSKT + +VL  P+ LK   RP 
Sbjct: 702  AAKAATPRCTDPGIAVGSPQTEITMDKNKSAENVVPYSSKTNSAMVLLEPTVLKQSVRPL 761

Query: 2740 VPIGTVPVVSRFKLDNRPTTFRILPP*PADFTNV 2841
               GT   ++R+KLDNRP  FRI+ P P    NV
Sbjct: 762  ALGGTPSQMNRYKLDNRPMGFRIMAPLPTGLANV 795


>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
            gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
            [Ricinus communis]
          Length = 972

 Score =  607 bits (1565), Expect = e-171
 Identities = 368/813 (45%), Positives = 471/813 (57%), Gaps = 23/813 (2%)
 Frame = +1

Query: 472  IEPKSSALNQGALSPVG-GSDPDEKEVSXXXXXXRNHKHRRRETRSQSFDKDAPGQPFRQ 648
            +E K +++  G LSP    SDP+EKE+S      RNHKHRRRETRSQS ++D+    F +
Sbjct: 1    MELKVASVKPGGLSPSDCASDPEEKEISDEDDDDRNHKHRRRETRSQSTERDSLEPIFTR 60

Query: 649  TNRKRNKPSENGQGFFRNDPQTSEIQREGNPTSLGRDLSARVGKKRAGLGPFVRTGFDLG 828
            + RKRNKP ENG  F  N+ Q SE  +  N   L +D   +  K+R G+  F R   DL 
Sbjct: 61   SYRKRNKPFENGHPFRENESQGSETWKNSNIAPLEKDF-IKFDKRRPGMASFPRMNVDLN 119

Query: 829  LRAGLNQAFHGDPVTHFDVSXXXXXXXXXXXXXXXSGPWNQHDLKFSSAETLDFASQMPL 1008
             R   NQ F G+P                      SG WNQ D +FSS   +D ASQM  
Sbjct: 120  QRIRSNQIFFGEP-------------GPGRGRGRDSGSWNQRDSRFSS---VDIASQMVQ 163

Query: 1009 LCPPPSSLFTGRGL-----------HPFGMIPGMPNGVLDSLHPLGSQ------MNHSVG 1137
                   LF GRGL           + FG+IPG+P+G LD+LHP+G Q      +N S+ 
Sbjct: 164  QGSITPGLFAGRGLPNVSNTQNSSWNTFGLIPGIPSGGLDTLHPIGLQGTLRPAVNSSLN 223

Query: 1138 ICIPHQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSIPSSHQGG--AG 1311
            I IP QRCRDFEERGFCLRGDMCPMEHG+NRIVVEDVQSLSQFNLPVS+PS+   G  AG
Sbjct: 224  IGIPRQRCRDFEERGFCLRGDMCPMEHGINRIVVEDVQSLSQFNLPVSLPSAPLVGTPAG 283

Query: 1312 AVSAHTGGGPSSLQGNGKFSLSKNSKHGIGDDGFCINRXXXXXXXXXEADLYDPDQPLWN 1491
              +  + G  S+   N K   S+NSK G+ DDG   N           ADLYDPDQPLWN
Sbjct: 284  PGALQSVGASSTTLMNSKGLHSRNSKSGMVDDGMGFNGAYSVSAAGSGADLYDPDQPLWN 343

Query: 1492 NDHPERSSALSGLSSAKVDDAEPIWNGDLSDRHSFILSDGFDVEQSGRXXXXXXXXXXXX 1671
             + PE SS L  L S+K D+ E   +   SD H   L D  D E   R            
Sbjct: 344  TNGPETSSGLLALHSSKNDETESFMSVGTSDHHHGRLRDNADNECGMRNTAIPDGSQTTS 403

Query: 1672 XXXWGRIRDGGSKLNAKGNFDTNIGSMGYHKNETKQEK-VLSSVLGATRQKKQFASEENG 1848
               WGR+    ++L+ K   D  + +  Y +NETK+++  L+++ G +RQ K+  SE++G
Sbjct: 404  SSVWGRVGSVKNRLDMKEKTDLTVSTSDYLENETKEDQDALANIQGTSRQGKRMISEDSG 463

Query: 1849 PKAMNLSSNHRLRTEPTHSNGRTSQKALRTLFVNGIPLKENKREALLSHFQKFGEIIDIY 2028
            PK ++ S+  + + +   +  ++SQKAL TLFV+GIP K NKR++LLSHFQKFG +IDIY
Sbjct: 464  PKTLDFST--KTQGDSMRNTRKSSQKALCTLFVSGIPQKNNKRDSLLSHFQKFGLVIDIY 521

Query: 2029 IPLNSEKAFVQFSKRDEAESALKAPDAVMGNRFVKLWWANRDSIPDNGLSINNTISAA-T 2205
            IP NSE+AFVQFS+R+EAE+AL+APDAVMGNRF+KLWWANRDSI  +G+S   +ISA   
Sbjct: 522  IPSNSERAFVQFSRREEAEAALRAPDAVMGNRFIKLWWANRDSIRGDGISSCQSISATPC 581

Query: 2206 QVVAASILPQSSVVDREKESRLAAVPKFNAAPLSDVP-ASTAVASLLVTNAPKVTLSQXX 2382
             V  AS+ PQ  + +R K++  +A  K    P  D     T     ++TN PKV      
Sbjct: 582  GVPGASVPPQPFIANRGKDNLQSAASKGATVPPPDASLPPTDHPKPVITNGPKVPPPLQK 641

Query: 2383 XXXXXXXXXXXRIKQEMLDKKRNDFRRQLNRLEKQAFTVQSEPTTEQAAKRHKVGMGTDI 2562
                       R KQE+L +KRNDFRRQL++LEKQA  V+ E   E AAKRH+VGM TDI
Sbjct: 642  KLELEQLKEELRKKQELLAQKRNDFRRQLDKLEKQATGVKGEVVVEPAAKRHRVGMATDI 701

Query: 2563 VKTATPSPINSITAECQPGSVKTVEKELSEESIVSPSSKTGATLVLQSPSSLKHPTRPSV 2742
            VK  T      +     P       +  S E+ +S S K  A+L+ Q  +  + P RP  
Sbjct: 702  VKVPTLRSSGHVLGVPSPRG-----ENKSFENPMSSSPKNNASLMQQETTGSRQPIRPVG 756

Query: 2743 PIGTVPVVSRFKLDNRPTTFRILPP*PADFTNV 2841
            P G    V+RFKLDNRPTTFRI+PP P   TNV
Sbjct: 757  PAGAPFSVNRFKLDNRPTTFRIIPPLPPGLTNV 789


>ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|222847276|gb|EEE84823.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score =  575 bits (1481), Expect = e-161
 Identities = 358/816 (43%), Positives = 461/816 (56%), Gaps = 24/816 (2%)
 Frame = +1

Query: 472  IEPKSSALNQGALSPVGG-SDPDEKEVSXXXXXXRNHKHRRRETRSQSFDKDAPGQPFRQ 648
            +E K S L  G LSP    SDP+EKEVS      RNHKHRRRETRSQS ++D+      +
Sbjct: 1    MELKVSPLKTGGLSPAECISDPEEKEVSDEEDDDRNHKHRRRETRSQSLERDSLEPVSTR 60

Query: 649  TNRKRNKPSENGQGFFRNDPQTSEIQREGNPTSLGRDLSARVGKKRAGLGPFVRTGFDLG 828
              RK NK  ENG  F  N+ Q  E  +  N  SL +D + +  + R  L    R   DL 
Sbjct: 61   PYRKHNKHFENGHPFRENESQARETWKNYNSVSLEKDYATKFERIRPDLMSLPRMPVDLN 120

Query: 829  LRAGLNQAFHGDPVTHFDVSXXXXXXXXXXXXXXXSGPWNQHDLKFSSAETLDFASQMPL 1008
             R  LNQ F GDP                       G W+Q D +FSS   +  ASQM  
Sbjct: 121  QRIRLNQTFSGDP-------------GPSRGRGREYGSWSQRDSRFSS---VGIASQMAH 164

Query: 1009 LCPPPSSLFTGRGL-----------HPFGMIPGMPNGVLDSLHPLGSQ------MNHSVG 1137
            L P   SLF GRGL           + FG++P M NG LD++HP+G Q      +N S+ 
Sbjct: 165  LGP---SLFAGRGLANVSNVQSASWNAFGLMPRMSNGGLDTIHPIGLQGTLRPAVNSSLN 221

Query: 1138 ICIPHQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSIPSSHQGG--AG 1311
            + IPHQRCRDFEERGFCLRGDMCP+EHGVNRIVVEDVQSLSQFNLPVS+P +   G  +G
Sbjct: 222  MGIPHQRCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSLSQFNLPVSLPRAQLPGTTSG 281

Query: 1312 AVSAHTGGGPSSLQGNGKFSLSKNSKHGIGDDGFCINRXXXXXXXXXEADLYDPDQPLWN 1491
              +  T G P +   N K    K++K GI DDG  +N            DLYDPDQPLWN
Sbjct: 282  LGAVPTVGAPPATLMNSKGMHGKSNKPGIVDDGLGLNGAYTGSVSVSGGDLYDPDQPLWN 341

Query: 1492 NDHPERSSALSGLSSAKVDDAEPIWNGDLSDRHSFILSDGFDVEQSGRXXXXXXXXXXXX 1671
            ++ PE SS L    S K D+ E + + D SD +   L DG D E   R            
Sbjct: 342  DNGPETSSTLLAPHSPKFDETESMISVDPSDHNHARLRDGADNECPIRSTGIAVGFQGMN 401

Query: 1672 XXXWGRIRDGGSKLNAKGNFDTNIGSMGYHKNETKQEK-VLSSVLGATRQKKQFASEENG 1848
               WGRI    ++L+ K   D+      Y ++E+K+++  L +V G + Q K    ++ G
Sbjct: 402  SSVWGRIGSLNNRLDVKEKIDSTASMSSYMESESKEDQGALDNVHGTSHQGKCTNFDDCG 461

Query: 1849 PKAMNLSSNHRLRTEPTHSNGRTSQKALRTLFVNGIPLKENKREALLSHFQKFGEIIDIY 2028
             K M+  S  ++ ++      + SQKALRTLFVNGIP K NKR+ALLSHFQKFGE+IDIY
Sbjct: 462  TKTMD--SPAKIHSDTMRHTRKLSQKALRTLFVNGIPHKSNKRDALLSHFQKFGEVIDIY 519

Query: 2029 IPLNSEKAFVQFSKRDEAESALKAPDAVMGNRFVKLWWANRDSIPDNGLSINNTISAATQ 2208
            IPLNSE+AF+QFSKR+EAE+AL+APDAVMGNRF++LWWANRDSIPD+  S          
Sbjct: 520  IPLNSERAFIQFSKREEAEAALRAPDAVMGNRFIRLWWANRDSIPDDATS--------RG 571

Query: 2209 VVAASILPQSSVVDREKESRLAAVPKFNAAPLSDVP-ASTAVASLLVTNAPKVT-LSQXX 2382
            V A S LP  S+ +  K++   A+ K    P SD    +T    + +TN P+V+   Q  
Sbjct: 572  VPATSGLPHLSIGNSGKDNLQLAISKTTVVPTSDTSMPATDHPKVDITNGPEVSPPMQKK 631

Query: 2383 XXXXXXXXXXXRIKQEMLDKKRNDFRRQLNRLEKQAFTVQSEPTTEQAAKRHKVGMGTDI 2562
                       R KQE+LD+KRNDFRRQL++LEKQA  V+ E  TE A+KR K G+ +D+
Sbjct: 632  LENLEQLKEELRKKQELLDQKRNDFRRQLHKLEKQATGVKGEVATEPASKRQKTGIASDV 691

Query: 2563 VKTATPSPINSITAECQP-GSVKTVEKELSEESIVSPSSKTGATLVLQSPSSLKHPTRPS 2739
             K AT    +       P G +  V+K    E+IVS S+KT   + LQ  +  K    P 
Sbjct: 692  AKAATTRSADPGAGVASPHGGI--VDKNKRMENIVSSSTKTSTVMALQESAGSKQSIHPL 749

Query: 2740 VPIGTVPVVSRFKLDNRPTTFRILPP*PADFTNVSC 2847
             P+G   +++++KLDNRPT F+I+ P PA   N SC
Sbjct: 750  APVGPPFLMNKYKLDNRPTAFKIISPLPAGLAN-SC 784


>ref|XP_002324006.1| predicted protein [Populus trichocarpa] gi|222867008|gb|EEF04139.1|
            predicted protein [Populus trichocarpa]
          Length = 964

 Score =  572 bits (1473), Expect = e-160
 Identities = 357/819 (43%), Positives = 459/819 (56%), Gaps = 28/819 (3%)
 Frame = +1

Query: 472  IEPKSSALNQGALSPVGG-SDPDEKEVSXXXXXXRNHKHRRRETRSQSFDKDAPGQPFRQ 648
            +E K S L  G LSP    SDP+EKEVS      RNHKHRRRE RSQS ++D+    F +
Sbjct: 1    MELKVSTLKTGGLSPADCISDPEEKEVSDEDDDDRNHKHRRREIRSQSLERDSLEPVFTR 60

Query: 649  TNRKRNKPSENGQGFFRNDPQTSEIQREGNPTSLGRDLSARVGKKRAGLGPFVRTGFDLG 828
              RKRNKP ENGQ +  ND          N   L +  + +  + R GL    R   D  
Sbjct: 61   PYRKRNKPFENGQFYQENDY---------NSVPLEKGFATKFERIRPGLVSLPRMPVDWN 111

Query: 829  LRAGLNQAFHGDPVTHFDVSXXXXXXXXXXXXXXXSGPWNQHDLKFSSAETLDFASQMPL 1008
             R   NQ F+GDP                         W+QHD +FS    +D ASQM  
Sbjct: 112  QRIRSNQTFYGDP-------------GLGRGRGREPVSWSQHDSRFSP---VDIASQM-- 153

Query: 1009 LCPPPSSLFTGRGL-----------HPFGMIPGMPNGVLDSLHPLGSQ------MNHSVG 1137
                  SLFTGRGL           + +G+ PG+PNG LD L P+G Q      +  S+ 
Sbjct: 154  -VHQGQSLFTGRGLANVSNAQSASWNAYGLFPGIPNGGLDKLRPIGLQATLRPAVTSSLN 212

Query: 1138 ICIPHQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSIPSSHQGGAGAV 1317
            + IP QRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVS+P +   G  A 
Sbjct: 213  MGIPQQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLPRAQLVGTTAR 272

Query: 1318 --SAHTGGGPSSLQGNGKFSLSKNSKHGIGDDGFCINRXXXXXXXXXEADLYDPDQPLWN 1491
              +  T G PS+   N K   SK +K GI + G   N            DLYDPDQPLWN
Sbjct: 273  PGALPTVGAPSATLINSKGMHSKCNKPGIVNAGLGFNGAHTGSASVSGGDLYDPDQPLWN 332

Query: 1492 NDHPERSSALSGLSSAKVDDAEPIWNGDLSDRHSFILSDGFDVEQSGRXXXXXXXXXXXX 1671
            +  PE SSAL    S K+D+ E + + D  D +   L  G D E   R            
Sbjct: 333  DSVPETSSALIAPHSPKIDEIESMISIDSFDHNHVSLRGGADNECPIRSTGIAVHSESLN 392

Query: 1672 XXXWGRIRDGGSKLNAKGNFDTNIGSMGYHKNETKQEK-VLSSVLGATRQKKQFASEENG 1848
               WG++R   ++L+ K   D  +  +   ++E+K+ +  L++V G +RQ KQ   E++ 
Sbjct: 393  SSVWGKVRASNNRLHVKEKTDLTVSMLNNMESESKENQGALANVRGTSRQGKQINFEDSS 452

Query: 1849 PKAMNLSSNHRLRTEPTHSNGRTSQKALRTLFVNGIPLKENKREALLSHFQKFGEIIDIY 2028
             K ++  S  + ++       + SQKALRTLFVNGIP K NKREALLSHFQKFGE+IDIY
Sbjct: 453  AKTID--SPAKTQSNTMRHTPKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEVIDIY 510

Query: 2029 IPLNSEKAFVQFSKRDEAESALKAPDAVMGNRFVKLWWANRDSIPDNGLSINNTISAATQ 2208
            IPLN+E+AFVQFSKR+EAE+AL+APDAVMGNRF++LWWANRDSIPD G   +N++S   +
Sbjct: 511  IPLNTERAFVQFSKREEAEAALRAPDAVMGNRFIRLWWANRDSIPDGGAGSSNSVSVTPR 570

Query: 2209 -VVAASILPQSSVVDREKESRLAAVPKFNAAPLSDVPASTAVAS-LLVTNAPKVTLSQXX 2382
             V + S  P   + +  K++   +V K  A P S  P      S ++ TN PKV      
Sbjct: 571  GVTSTSFPPHLPIGNSGKDNLQLSVSKATAVPPSVAPVPAIDHSKVITTNVPKVPPPMQK 630

Query: 2383 XXXXXXXXXXXRIKQEMLDKKRNDFRRQLNRLEKQAFTVQSEPTTEQAAKRHKVGM-GTD 2559
                       R KQE+LD+KRNDFRRQL++LEKQA  V+ E T E A+KRHK G+  +D
Sbjct: 631  LESLEQLKEELRKKQELLDQKRNDFRRQLDKLEKQATGVKGEVTAEPASKRHKTGIPASD 690

Query: 2560 IVKTATPSPINSITAECQPGS----VKTVEKELSEESIVSPSSKTGATLVLQSPSSLKHP 2727
            IVK ATP           PGS     + V+K  + E++VS SSKT   + LQ  +  K  
Sbjct: 691  IVKAATP-------RSADPGSASPHAEMVDKNKTVENVVSSSSKTCVMMALQDSAGSKPS 743

Query: 2728 TRPSVPIGTVPVVSRFKLDNRPTTFRILPP*PADFTNVS 2844
              P  P+G   +++++KLDNRPT F+I+ P PA   NV+
Sbjct: 744  IHPLAPVGPPFLMNKYKLDNRPTAFKIISPLPAGLANVA 782


>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
            [Glycine max]
          Length = 922

 Score =  539 bits (1389), Expect = e-150
 Identities = 336/795 (42%), Positives = 447/795 (56%), Gaps = 22/795 (2%)
 Frame = +1

Query: 526  SDPDEKEVSXXXXXXRNHKHRRRETRSQSFDKDAPGQPFRQTNRKRNKPSENGQGFFRND 705
            SDP+EKEVS      RNHKHRRRETRSQS ++D       ++ +KRNK   N   F  N+
Sbjct: 20   SDPEEKEVSDDDDDDRNHKHRRRETRSQSLERDVSDPVISRSFKKRNKNFGNRHPFRENE 79

Query: 706  PQTSEIQREGNPTSLGRDLSARVGKKRAGLGPFVRTGFDLGLRAGLNQAFHGDPVTHFDV 885
             Q  E  +  +  +  ++   +  ++R GL    RT  D+  R   NQ+F GDP      
Sbjct: 80   SQAFETLKTYSDATTDKEFYFKFDRRRPGLASAPRTPLDMSQRLRANQSFTGDP------ 133

Query: 886  SXXXXXXXXXXXXXXXSGPWNQHDLKFSSAETLDFASQMPLLCPPPSSLFTGRGL----- 1050
                            SG WNQ + +F S   +D ASQM      P SL+ GRGL     
Sbjct: 134  -------GVGRGRGRESGFWNQRESRFGS---MDVASQMVPQGSIPPSLYAGRGLPNVSN 183

Query: 1051 ------HPFGMIPGMPNGVLDSLHPLGSQ------MNHSVGICIPHQRCRDFEERGFCLR 1194
                  + FG+IP +PNG LD LHP+G Q      ++ S+ + IP QRCRDFEERGFCLR
Sbjct: 184  AQNAAWNTFGLIPAVPNGGLDMLHPMGLQGTLRAPISSSLNVNIPRQRCRDFEERGFCLR 243

Query: 1195 GDMCPMEHGVNRIVVEDVQSLSQFNLPVSIPSSHQGGA--GAVSAHTGGGPSSLQGNGKF 1368
            GDMCPMEHGVNRIV+EDVQSLSQFNLPVS+PS+H  GA  G+ S H+    S+   N K 
Sbjct: 244  GDMCPMEHGVNRIVIEDVQSLSQFNLPVSLPSAHLIGAPAGSGSLHSVNA-STPSVNNKC 302

Query: 1369 SLSKNSKHGIGDDGFCINRXXXXXXXXXEADLYDPDQPLWNNDHPERSSALSGLSSAKVD 1548
               K SK  + DDG  ++           ADLYDPDQPLWN+   E S+AL  L S+K+D
Sbjct: 303  LPGKISKSVVNDDGLPLDGVYTGPGCTSGADLYDPDQPLWNDCGLESSNALLTLQSSKID 362

Query: 1549 DAEPIWNGDLSDRHSFILSDGFDVEQSGRXXXXXXXXXXXXXXXWGRIRDGGSKLNAKGN 1728
            +++PI N D  D    + +    V   G                W RI    ++ + K  
Sbjct: 363  ESKPISN-DAPDSDCPVGTARTSVSSQGASSSV-----------WARIGSSKNRFDMKEK 410

Query: 1729 FDTNIGSMGYHKNETKQEK-VLSSVLGATRQKKQFASEENGPKAMNLSSNHRLRTEPTHS 1905
             ++   S  Y +N+ K++   L     A+ Q KQ  +++  PKA+  S   + +T+   +
Sbjct: 411  TNSTTSSFNYPENQLKEDNDELVGAHNASFQVKQNIADDADPKALEASL--KAQTDSMRN 468

Query: 1906 NGRTSQKALRTLFVNGIPLKENKREALLSHFQKFGEIIDIYIPLNSEKAFVQFSKRDEAE 2085
              ++SQKA  TLFVNGIP K NKREALL+HF+KFGE+IDIYIPLNSE+AFVQFSKR+EAE
Sbjct: 469  IRKSSQKAFCTLFVNGIPQKYNKREALLAHFKKFGEVIDIYIPLNSERAFVQFSKREEAE 528

Query: 2086 SALKAPDAVMGNRFVKLWWANRDSIPDNGLSINNTISAATQVVAASILPQSSVV-DREKE 2262
            +ALKAPDAVMGNRF+KLWWANRDSI  +  +  N +    +  A + +P   VV DR K+
Sbjct: 529  AALKAPDAVMGNRFIKLWWANRDSIRKDSTTSGNGVIVTPRGQAPAFVPSHPVVTDRGKD 588

Query: 2263 SRLAAVPKFNAAPLSDVPASTAVASLLVTNAPKVTLS-QXXXXXXXXXXXXXRIKQEMLD 2439
               A   K     + +V + T  +  ++T+ PKV    Q             R KQEMLD
Sbjct: 589  IHQADASK----TMYEVSSPTDQSKPVITDGPKVPPPLQKKLVNLESLKEELRKKQEMLD 644

Query: 2440 KKRNDFRRQLNRLEKQAFTVQSEPTTEQAAKRHKVGMGTDIVKTATPSPINSITAECQPG 2619
            +KRN+F+RQLN+ EKQA  ++ E +TEQA KR K+G  +D+ K A+P   ++      P 
Sbjct: 645  QKRNEFKRQLNKFEKQASGLKGEVSTEQATKRLKMGGTSDVAKLASPQSSDADVGMTSPH 704

Query: 2620 SVKTVEKELSEESIVSPSSKTGATLVLQSPSSLKHPTRPSVPIGTVPVVSRFKLDNRPTT 2799
            +  T +K       VS S K+     LQ  + LKHP +P +P      V+R+KLDNRP  
Sbjct: 705  TEATADKNKQLVYPVSQSPKSSTATRLQESTGLKHPIQPLMP------VNRYKLDNRPAA 758

Query: 2800 FRILPP*PADFTNVS 2844
            FRI+PP PA   NV+
Sbjct: 759  FRIIPPLPAGLANVA 773


Top