BLASTX nr result
ID: Coptis24_contig00002672
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002672 (1278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002315216.1| predicted protein [Populus trichocarpa] gi|2... 367 3e-99 ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1... 367 5e-99 ref|XP_002531577.1| protein binding protein, putative [Ricinus c... 360 3e-97 gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo] 358 2e-96 emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera] 355 1e-95 >ref|XP_002315216.1| predicted protein [Populus trichocarpa] gi|222864256|gb|EEF01387.1| predicted protein [Populus trichocarpa] Length = 276 Score = 367 bits (943), Expect = 3e-99 Identities = 183/279 (65%), Positives = 206/279 (73%) Frame = -1 Query: 1032 MSFVFRGTRADLESGFPGFIPERRGMRVHAPRPANANSXXXXXXXXXXXXXLNSHQMSPN 853 MSFVFRG R+D+E+GFP F+PERR +RVHA RP N+NS LNSHQMSPN Sbjct: 1 MSFVFRGARSDIENGFPSFVPERRTLRVHATRPVNSNSLVFLVTVLLLFMILNSHQMSPN 60 Query: 852 FLLWIVVGVFLVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 673 FLLW+V+GVF +AT+LRMYATC A + SGLLGHTELRLHMPPSI AT Sbjct: 61 FLLWLVLGVFFMATTLRMYATCQQLQAQAQAHAVMASGLLGHTELRLHMPPSIALATRGR 120 Query: 672 XXXXXXXXXXLDREFDDLDYETLRALDSDNASNTTSMSEEEINALPVHNYKVAGPQSDGA 493 LDREFDDLDYETLRALD DN N TSMSEEEINALPVH YKV GPQ+ G+ Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDGDNVPNGTSMSEEEINALPVHKYKVTGPQNGGS 180 Query: 492 SRQQVXXXXSIVEYKQKNQDITREDGNVKSSEDELTCSVCLEQVNVGELIRSLPCLHQFH 313 S QQ V +QK QD G++KSS+DELTCSVCLEQV++GE+IR+LPCLHQFH Sbjct: 181 SMQQASSS---VSAEQKKQDTGNAIGSMKSSDDELTCSVCLEQVSMGEVIRTLPCLHQFH 237 Query: 312 ANCIDPWLRQQGTCPVCKFRVGSAWQENGESGMDASYMV 196 ANCIDPWLRQQGTCPVCKFR GS W ENG+ G+DASYMV Sbjct: 238 ANCIDPWLRQQGTCPVCKFRAGSGWNENGQGGLDASYMV 276 >ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera] gi|296086209|emb|CBI31650.3| unnamed protein product [Vitis vinifera] Length = 275 Score = 367 bits (941), Expect = 5e-99 Identities = 187/279 (67%), Positives = 203/279 (72%) Frame = -1 Query: 1032 MSFVFRGTRADLESGFPGFIPERRGMRVHAPRPANANSXXXXXXXXXXXXXLNSHQMSPN 853 MSFVFRG+RAD+ESGFPGFIPERR +RVHA RP N NS LNSHQMSPN Sbjct: 1 MSFVFRGSRADIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN 60 Query: 852 FLLWIVVGVFLVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 673 FL+W+V+G+FL+AT+LRMYATC A A SGLLGHTELRLHMPPSI AT Sbjct: 61 FLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGR 120 Query: 672 XXXXXXXXXXLDREFDDLDYETLRALDSDNASNTTSMSEEEINALPVHNYKVAGPQSDGA 493 LDREFDDLDYETLRALDS+N T SMSEEEINALPVH YKVAG Q G+ Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGS 180 Query: 492 SRQQVXXXXSIVEYKQKNQDITREDGNVKSSEDELTCSVCLEQVNVGELIRSLPCLHQFH 313 S QQ S +K QDI + K+ +DELTCSVCLEQVNVGELIRSLPCLHQFH Sbjct: 181 SMQQGSSSAS----AEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFH 236 Query: 312 ANCIDPWLRQQGTCPVCKFRVGSAWQENGESGMDASYMV 196 ANCIDPWLRQQGTCPVCKFR WQENG+ GMDASYMV Sbjct: 237 ANCIDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275 >ref|XP_002531577.1| protein binding protein, putative [Ricinus communis] gi|223528807|gb|EEF30813.1| protein binding protein, putative [Ricinus communis] Length = 276 Score = 360 bits (925), Expect = 3e-97 Identities = 184/279 (65%), Positives = 201/279 (72%) Frame = -1 Query: 1032 MSFVFRGTRADLESGFPGFIPERRGMRVHAPRPANANSXXXXXXXXXXXXXLNSHQMSPN 853 MSFVFRGTRADLE+GF GFIPERR +RVHA RP N+NS LNS QMSPN Sbjct: 1 MSFVFRGTRADLENGFQGFIPERRAVRVHATRPVNSNSLVFLVTVLLLFMILNSQQMSPN 60 Query: 852 FLLWIVVGVFLVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 673 FLLW+V+GVFL+ATSLRMY TC A SGLLGHTELRLHMPPSI AT Sbjct: 61 FLLWLVLGVFLMATSLRMYVTCQQLQAQAQAHATMASGLLGHTELRLHMPPSIALATRGR 120 Query: 672 XXXXXXXXXXLDREFDDLDYETLRALDSDNASNTTSMSEEEINALPVHNYKVAGPQSDGA 493 LDREFDDLDYETLRALDSDN T SMS+EEINALPVH YK+ Q+ G+ Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSDNVPTTASMSDEEINALPVHKYKLTALQTGGS 180 Query: 492 SRQQVXXXXSIVEYKQKNQDITREDGNVKSSEDELTCSVCLEQVNVGELIRSLPCLHQFH 313 S QQ V + K QD G++K+SEDELTCSVCLEQVNVGELIR+LPCLHQFH Sbjct: 181 SMQQASSS---VSAEPKKQDTANAVGSMKASEDELTCSVCLEQVNVGELIRTLPCLHQFH 237 Query: 312 ANCIDPWLRQQGTCPVCKFRVGSAWQENGESGMDASYMV 196 ANCIDPWLRQQGTCPVCKFR S W ENG+ G+DASYMV Sbjct: 238 ANCIDPWLRQQGTCPVCKFRAASGWHENGQGGLDASYMV 276 >gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo] Length = 275 Score = 358 bits (919), Expect = 2e-96 Identities = 188/280 (67%), Positives = 202/280 (72%), Gaps = 1/280 (0%) Frame = -1 Query: 1032 MSFVFRGTRA-DLESGFPGFIPERRGMRVHAPRPANANSXXXXXXXXXXXXXLNSHQMSP 856 MSFVFRGTR D+E+G GFIPERR MRVHA RP N+NS LNSHQMSP Sbjct: 1 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60 Query: 855 NFLLWIVVGVFLVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXX 676 NFLLW+V+GVFL+AT+LRMYATC AR MA SGLLGHTELRLHMPPSI AT Sbjct: 61 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120 Query: 675 XXXXXXXXXXXLDREFDDLDYETLRALDSDNASNTTSMSEEEINALPVHNYKVAGPQSDG 496 LDREFDDLDYETLRALDSDNA T SMSEE+INALPVH YKV+GPQSD Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180 Query: 495 ASRQQVXXXXSIVEYKQKNQDITREDGNVKSSEDELTCSVCLEQVNVGELIRSLPCLHQF 316 + QQ E +K QD G+ K+SEDELTCSVCLEQVNVGELIRSLPCLHQF Sbjct: 181 SVNQQASSS----ESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQF 236 Query: 315 HANCIDPWLRQQGTCPVCKFRVGSAWQENGESGMDASYMV 196 HANCIDPWLRQQGTCPVCKFR S W E G+ DA YMV Sbjct: 237 HANCIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA-YMV 275 >emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera] Length = 262 Score = 355 bits (912), Expect = 1e-95 Identities = 181/279 (64%), Positives = 197/279 (70%) Frame = -1 Query: 1032 MSFVFRGTRADLESGFPGFIPERRGMRVHAPRPANANSXXXXXXXXXXXXXLNSHQMSPN 853 MSFVFRG+RAD+ESGFPGFIPERR +RVHA RP N NS LNSHQMSPN Sbjct: 1 MSFVFRGSRADIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN 60 Query: 852 FLLWIVVGVFLVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 673 FL+W+V+G+FL+AT+LRMYATC A A SGLLGHTELRLHMPPSI AT Sbjct: 61 FLIWLVLGIFLMATTLRMYATCQQLQAHAQAHAAAASGLLGHTELRLHMPPSIALATRGR 120 Query: 672 XXXXXXXXXXLDREFDDLDYETLRALDSDNASNTTSMSEEEINALPVHNYKVAGPQSDGA 493 LDREFDDLDYETLRALDS+N T SMSEEEINALPVH YKVAG Q G+ Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGS 180 Query: 492 SRQQVXXXXSIVEYKQKNQDITREDGNVKSSEDELTCSVCLEQVNVGELIRSLPCLHQFH 313 S QQ + ++ +DELTCSVCLEQVNVGELIRSLPCLHQFH Sbjct: 181 SMQQ-----------------GSSSASAEAPDDELTCSVCLEQVNVGELIRSLPCLHQFH 223 Query: 312 ANCIDPWLRQQGTCPVCKFRVGSAWQENGESGMDASYMV 196 ANCIDPWLRQQGTCPVCKFR WQENG+ GMDASYMV Sbjct: 224 ANCIDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 262