BLASTX nr result

ID: Coptis24_contig00002665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002665
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263823.1| PREDICTED: monothiol glutaredoxin-S16, chlor...   189   9e-46
ref|NP_001234270.1| GRX1 protein [Solanum lycopersicum] gi|30823...   184   4e-44
ref|XP_002532109.1| glutaredoxin, grx, putative [Ricinus communi...   182   1e-43
gb|AER93282.1| GRX1 [Nicotiana benthamiana]                           175   2e-41
ref|XP_003520429.1| PREDICTED: monothiol glutaredoxin-S16, chlor...   167   5e-39

>ref|XP_002263823.1| PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Vitis vinifera]
            gi|296083172|emb|CBI22808.3| unnamed protein product
            [Vitis vinifera]
          Length = 297

 Score =  189 bits (481), Expect = 9e-46
 Identities = 98/165 (59%), Positives = 127/165 (76%), Gaps = 3/165 (1%)
 Frame = -3

Query: 1154 STATLNLLTSPTSIFPKITPRLSFSSHLK---TFPSLSLKLTNSKRLSSLTLVSAVKKIS 984
            S ++L LL+S +S   + TP LSF SH K   +F S+SLK   + R  +LT+VSA  K+S
Sbjct: 12   SPSSLRLLSSYSS---QNTPTLSFYSHTKPSLSFSSVSLKPITTARSRTLTVVSAFGKLS 68

Query: 983  ETDNVKVPLESNEISGYFPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDLCSA 804
            ET+ + +P    EI+G FP++SGVYAV+DQ++ LQFIG++R+IA SVL+HRKSV +LC +
Sbjct: 69   ETEPIPLPPAPEEIAGKFPSESGVYAVYDQSDVLQFIGITRSIAASVLAHRKSVPELCCS 128

Query: 803  VKVGVVDEPDRTTLTEAWKSWMEEHIAATGKVPPGNESGNGIWVK 669
            VKV VVDEPDRT LT+AWKSWMEEHI ATGK+PPGNESGN  WV+
Sbjct: 129  VKVAVVDEPDRTALTQAWKSWMEEHIGATGKIPPGNESGNTTWVR 173



 Score =  136 bits (343), Expect = 9e-30
 Identities = 62/70 (88%), Positives = 66/70 (94%)
 Frame = -1

Query: 481 CGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDI 302
           CGFSQRVVGILES+G DYES+DVLDEEHN GLR+TLK YSNWPTFPQ+FVNGELVGGCDI
Sbjct: 222 CGFSQRVVGILESEGVDYESLDVLDEEHNYGLRETLKKYSNWPTFPQIFVNGELVGGCDI 281

Query: 301 LVSMHEKGEL 272
           L SMHEKGEL
Sbjct: 282 LTSMHEKGEL 291


>ref|NP_001234270.1| GRX1 protein [Solanum lycopersicum] gi|308233001|emb|CBI83380.1|
            SlGRX1 protein [Solanum lycopersicum]
          Length = 292

 Score =  184 bits (467), Expect = 4e-44
 Identities = 93/167 (55%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
 Frame = -3

Query: 1154 STATLNLLTSPTSIFPKITPRLSFSSHLKT---FPSLSL--KLTNSKRLSSLTLVSAVKK 990
            +T  ++ LT P     + TP  S  S  KT   FPS++L  K   + R  +  +V+A+KK
Sbjct: 2    ATFNISFLTQPAIFSSQNTPSFSSYSLPKTSFRFPSITLRPKTRTTTRHHASIVVAALKK 61

Query: 989  ISETDNVKVPLESNEISGYFPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDLC 810
            +SETD + VPL+S+EI+G FP +SGVYAV+D N DLQF+G+S NIA SV+SH+ S   LC
Sbjct: 62   LSETDPLTVPLQSDEIAGSFPKESGVYAVYDTNGDLQFVGISHNIAASVISHKNSAPQLC 121

Query: 809  SAVKVGVVDEPDRTTLTEAWKSWMEEHIAATGKVPPGNESGNGIWVK 669
            S+VKVGVV+EPDRT LTE+WKSWMEEHI   GKVPPGNE GN  WV+
Sbjct: 122  SSVKVGVVEEPDRTALTESWKSWMEEHITTNGKVPPGNEPGNSTWVR 168



 Score =  131 bits (330), Expect = 3e-28
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = -1

Query: 481 CGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDI 302
           CGFSQRVV ILES+G DYES+DVLDEE+NSGLR+TLK+YSNWPTFPQ+FV GELVGGCDI
Sbjct: 217 CGFSQRVVSILESEGVDYESIDVLDEEYNSGLRETLKNYSNWPTFPQIFVKGELVGGCDI 276

Query: 301 LVSMHEKGELST 266
           L SM+EKGEL++
Sbjct: 277 LTSMYEKGELAS 288


>ref|XP_002532109.1| glutaredoxin, grx, putative [Ricinus communis]
            gi|223528212|gb|EEF30271.1| glutaredoxin, grx, putative
            [Ricinus communis]
          Length = 307

 Score =  182 bits (462), Expect = 1e-43
 Identities = 92/148 (62%), Positives = 116/148 (78%), Gaps = 4/148 (2%)
 Frame = -3

Query: 1100 TPRLSFSSHLKTF---PSLSLKLTNSK-RLSSLTLVSAVKKISETDNVKVPLESNEISGY 933
            TP+LSF SH K F   PS+SLK + +  +   L + +AVK ++ET+ V VPL ++E S  
Sbjct: 36   TPKLSFYSHSKPFLPFPSISLKPSVTVIKPRPLFISAAVKNLTETELVSVPLTADEFSQK 95

Query: 932  FPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVSDLCSAVKVGVVDEPDRTTLTEA 753
             P++SGVYAV+D+N+DLQFIG+SR+IA SV SH KSV +LC +VKVGVVDEPDRTTLT+A
Sbjct: 96   LPSESGVYAVYDKNDDLQFIGISRDIAASVFSHLKSVPELCCSVKVGVVDEPDRTTLTQA 155

Query: 752  WKSWMEEHIAATGKVPPGNESGNGIWVK 669
            WKSW+EEHI  TGKVPPGNESGN  W+K
Sbjct: 156  WKSWIEEHIKTTGKVPPGNESGNATWIK 183



 Score =  135 bits (341), Expect = 2e-29
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = -1

Query: 481 CGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDI 302
           CGFSQRVVGILE+QG DYESVDVLDEE+N GLR+TLK YSNWPTFPQVFVNGEL+GGCDI
Sbjct: 232 CGFSQRVVGILENQGVDYESVDVLDEEYNYGLRETLKKYSNWPTFPQVFVNGELIGGCDI 291

Query: 301 LVSMHEKGELS 269
           L SMHEKGEL+
Sbjct: 292 LTSMHEKGELA 302


>gb|AER93282.1| GRX1 [Nicotiana benthamiana]
          Length = 298

 Score =  175 bits (444), Expect = 2e-41
 Identities = 85/133 (63%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
 Frame = -3

Query: 1064 FPSLSLKLTNSKRLSSLTLV-SAVKKISETDNVKVPLESNEISGYFPADSGVYAVFDQNN 888
            FPS++L+  +  R   +++V +AVKK+SETD + VPL+  EISG FP +SGVYAV+D N 
Sbjct: 42   FPSIALRPKSRTRNRHVSIVVAAVKKLSETDPLTVPLKPLEISGSFPKESGVYAVYDSNG 101

Query: 887  DLQFIGVSRNIAVSVLSHRKSVSDLCSAVKVGVVDEPDRTTLTEAWKSWMEEHIAATGKV 708
             LQF+G+SRNIA SV+SH+ +V  LCS+VKVGVVDEP+R  LTE+WKSWMEEHIAATGKV
Sbjct: 102  VLQFVGISRNIAASVVSHKNTVPQLCSSVKVGVVDEPNRIALTESWKSWMEEHIAATGKV 161

Query: 707  PPGNESGNGIWVK 669
            PPGNE GN  WV+
Sbjct: 162  PPGNEPGNSTWVR 174



 Score =  130 bits (326), Expect = 9e-28
 Identities = 59/72 (81%), Positives = 67/72 (93%)
 Frame = -1

Query: 481 CGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDI 302
           CGFSQRVV +LES+G DYESVDVLDEE+N GLR+TLK+YSNWPTFPQ+FV GELVGGCDI
Sbjct: 223 CGFSQRVVAMLESEGVDYESVDVLDEEYNYGLRETLKNYSNWPTFPQIFVKGELVGGCDI 282

Query: 301 LVSMHEKGELST 266
           L SM+EKGEL+T
Sbjct: 283 LTSMYEKGELAT 294


>ref|XP_003520429.1| PREDICTED: monothiol glutaredoxin-S16, chloroplastic-like [Glycine
            max]
          Length = 295

 Score =  167 bits (423), Expect = 5e-39
 Identities = 90/170 (52%), Positives = 115/170 (67%), Gaps = 10/170 (5%)
 Frame = -3

Query: 1148 ATLNLLTSP-------TSIFPKITPRLSFSSHLKTFPS---LSLKLTNSKRLSSLTLVSA 999
            ATLNL +         +S FP+ TP LSF+   K F +   +SLK   S++  +  +  A
Sbjct: 2    ATLNLSSLQALAFHRLSSSFPQSTPTLSFNFQPKPFANPRPISLKPYVSEKPRARVVALA 61

Query: 998  VKKISETDNVKVPLESNEISGYFPADSGVYAVFDQNNDLQFIGVSRNIAVSVLSHRKSVS 819
            VK + ET+ V V  E  + +G  P+ SGVYAV+D N D+QFIG+SRNIA SV +H KSV 
Sbjct: 62   VKSLGETEAVAVSPEDGQSAGELPSGSGVYAVYDTNGDVQFIGLSRNIAASVAAHWKSVP 121

Query: 818  DLCSAVKVGVVDEPDRTTLTEAWKSWMEEHIAATGKVPPGNESGNGIWVK 669
            +LC +VK GVVDEPDR TLT+AWKSWMEE+I  +GKVPPGNESGN  WV+
Sbjct: 122  ELCGSVKAGVVDEPDRETLTQAWKSWMEEYIKVSGKVPPGNESGNATWVR 171



 Score =  126 bits (316), Expect = 1e-26
 Identities = 56/72 (77%), Positives = 67/72 (93%)
 Frame = -1

Query: 481 CGFSQRVVGILESQGADYESVDVLDEEHNSGLRDTLKSYSNWPTFPQVFVNGELVGGCDI 302
           CGFSQRV+ ILE++G DYESV+VLDEE+N GLR+TLK YSNWPTFPQ+FV+GELVGGCDI
Sbjct: 220 CGFSQRVIAILENEGVDYESVNVLDEEYNYGLRETLKKYSNWPTFPQIFVDGELVGGCDI 279

Query: 301 LVSMHEKGELST 266
           L SM+EKGEL++
Sbjct: 280 LTSMYEKGELAS 291


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