BLASTX nr result

ID: Coptis24_contig00002663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002663
         (1494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27263.3| unnamed protein product [Vitis vinifera]              547   e-153
ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-...   547   e-153
gb|AFK35605.1| unknown [Lotus japonicus]                              523   e-146
ref|XP_002312279.1| predicted protein [Populus trichocarpa] gi|2...   522   e-146
ref|XP_003614041.1| COBW domain-containing protein [Medicago tru...   518   e-144

>emb|CBI27263.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  547 bits (1410), Expect = e-153
 Identities = 275/367 (74%), Positives = 315/367 (85%)
 Frame = +3

Query: 33   DDEIPPLAVDIMDPTISKKXXXXXXXXXXXTIITGYLGSGKSTLVNYILNDQHGKKIAVI 212
            +DE PPLAV+I   T  +            T+ITGYLG+GKST VN+ILN QHGK+IAVI
Sbjct: 4    EDEDPPLAVEINKSTPPQSQNDDVSVGV--TVITGYLGAGKSTFVNFILNSQHGKRIAVI 61

Query: 213  LNEFGDEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSFVQALEQLIQRKERLDHI 392
            LNEFG+EIGVERAMINEGD GALVEEWVELANGCICCTVKHS VQALEQL+Q KERLDHI
Sbjct: 62   LNEFGEEIGVERAMINEGDNGALVEEWVELANGCICCTVKHSLVQALEQLVQMKERLDHI 121

Query: 393  LLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLKHQLTQHRDSSSFPETTLQ 572
            LLETTGLANPAPLASVLWLDDQLES+V+LDSIITVVDAKNL+ QL  H  SSSFPE  LQ
Sbjct: 122  LLETTGLANPAPLASVLWLDDQLESSVRLDSIITVVDAKNLRFQLNSHHGSSSFPEAFLQ 181

Query: 573  IAFADLIILNKIDLISPEDSGIGIMDVLEELEKDIYNINSLASVIHSVRCQVDLSKILDC 752
            IAFAD++ILNK+DL+SPE+SG     VLEELEK+I+NINSLA++IHSVRCQVDLSKILDC
Sbjct: 182  IAFADVVILNKVDLVSPEESG----GVLEELEKEIHNINSLANIIHSVRCQVDLSKILDC 237

Query: 753  RAYEAKHLAHLESLLRENQSVPIRNLHDSSVRTLCISELEEVDLEKVRLWLEEILWEKKH 932
            RAY+A H  HLE+LL ENQS+  ++LHDS+VRTLCISE   VDL+KVRLWLEEILW+KK+
Sbjct: 238  RAYDATHATHLEALLEENQSLSSKDLHDSNVRTLCISEPLPVDLDKVRLWLEEILWDKKY 297

Query: 933  NMDVYRCKGVLNVRNSDQVHTIQAVREIYEIVPVRRWKLEENRMDKIVFIGQNLQEDILR 1112
            +MDVYRCKGVL V +SDQ+HT+QAVREIYEIVP R+WK EEN+M+KIVFIG NL ED L 
Sbjct: 298  SMDVYRCKGVLRVLDSDQLHTLQAVREIYEIVPTRKWKNEENQMNKIVFIGHNLNEDALT 357

Query: 1113 DSFKACI 1133
            +SF+AC+
Sbjct: 358  NSFRACM 364


>ref|XP_002274691.1| PREDICTED: COBW domain-containing protein 1-like [Vitis vinifera]
          Length = 368

 Score =  547 bits (1410), Expect = e-153
 Identities = 275/367 (74%), Positives = 315/367 (85%)
 Frame = +3

Query: 33   DDEIPPLAVDIMDPTISKKXXXXXXXXXXXTIITGYLGSGKSTLVNYILNDQHGKKIAVI 212
            +DE PPLAV+I   T  +            T+ITGYLG+GKST VN+ILN QHGK+IAVI
Sbjct: 4    EDEDPPLAVEINKSTPPQSQNDDVSVGV--TVITGYLGAGKSTFVNFILNSQHGKRIAVI 61

Query: 213  LNEFGDEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSFVQALEQLIQRKERLDHI 392
            LNEFG+EIGVERAMINEGD GALVEEWVELANGCICCTVKHS VQALEQL+Q KERLDHI
Sbjct: 62   LNEFGEEIGVERAMINEGDNGALVEEWVELANGCICCTVKHSLVQALEQLVQMKERLDHI 121

Query: 393  LLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLKHQLTQHRDSSSFPETTLQ 572
            LLETTGLANPAPLASVLWLDDQLES+V+LDSIITVVDAKNL+ QL  H  SSSFPE  LQ
Sbjct: 122  LLETTGLANPAPLASVLWLDDQLESSVRLDSIITVVDAKNLRFQLNSHHGSSSFPEAFLQ 181

Query: 573  IAFADLIILNKIDLISPEDSGIGIMDVLEELEKDIYNINSLASVIHSVRCQVDLSKILDC 752
            IAFAD++ILNK+DL+SPE+SG     VLEELEK+I+NINSLA++IHSVRCQVDLSKILDC
Sbjct: 182  IAFADVVILNKVDLVSPEESG----GVLEELEKEIHNINSLANIIHSVRCQVDLSKILDC 237

Query: 753  RAYEAKHLAHLESLLRENQSVPIRNLHDSSVRTLCISELEEVDLEKVRLWLEEILWEKKH 932
            RAY+A H  HLE+LL ENQS+  ++LHDS+VRTLCISE   VDL+KVRLWLEEILW+KK+
Sbjct: 238  RAYDATHATHLEALLEENQSLSSKDLHDSNVRTLCISEPLPVDLDKVRLWLEEILWDKKY 297

Query: 933  NMDVYRCKGVLNVRNSDQVHTIQAVREIYEIVPVRRWKLEENRMDKIVFIGQNLQEDILR 1112
            +MDVYRCKGVL V +SDQ+HT+QAVREIYEIVP R+WK EEN+M+KIVFIG NL ED L 
Sbjct: 298  SMDVYRCKGVLRVLDSDQLHTLQAVREIYEIVPTRKWKNEENQMNKIVFIGHNLNEDALT 357

Query: 1113 DSFKACI 1133
            +SF+AC+
Sbjct: 358  NSFRACM 364


>gb|AFK35605.1| unknown [Lotus japonicus]
          Length = 390

 Score =  523 bits (1348), Expect = e-146
 Identities = 262/377 (69%), Positives = 316/377 (83%), Gaps = 2/377 (0%)
 Frame = +3

Query: 9    KFSTMELHDDEIPPLAVDI--MDPTISKKXXXXXXXXXXXTIITGYLGSGKSTLVNYILN 182
            K S ME  +DE  PLAV I  +D ++S++           T+ITGYLG+GKSTLVN+ILN
Sbjct: 23   KQSKMEHDEDEEAPLAVQIQGLDESVSQQSSVGV------TLITGYLGAGKSTLVNHILN 76

Query: 183  DQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSFVQALEQL 362
             QHGK+IAVILNEFG+EIGVERAMINEGDGGA+VEEWVELANGCICCTVKHS VQALEQL
Sbjct: 77   SQHGKRIAVILNEFGEEIGVERAMINEGDGGAMVEEWVELANGCICCTVKHSLVQALEQL 136

Query: 363  IQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLKHQLTQHRD 542
            +QRKERLDHILLETTGLANPAPLASVLWLD+QLES VKLDSI+TVVDAKN++ Q+ QHR 
Sbjct: 137  VQRKERLDHILLETTGLANPAPLASVLWLDEQLESDVKLDSIVTVVDAKNVRLQIDQHRR 196

Query: 543  SSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEELEKDIYNINSLASVIHSVRC 722
            SSS+PE   QIAFAD+IILNK+DL+S E SG      L+ELE++I+NINSL  +IHSV+C
Sbjct: 197  SSSYPEAYFQIAFADIIILNKVDLVSAEGSG-----ALKELEEEIHNINSLVEIIHSVKC 251

Query: 723  QVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSSVRTLCISELEEVDLEKVRLW 902
            QVDLSKIL+  AY+     HLE+LL E+ S+  + LHDS VRT+CISE + +D++K R+W
Sbjct: 252  QVDLSKILNRHAYDTARAPHLETLLEESCSLSTKKLHDSGVRTICISEQKTIDIDKTRIW 311

Query: 903  LEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYEIVPVRRWKLEENRMDKIVFI 1082
            LEEILWEKK++MDVYRCKGVL+V+NSDQ+HT+QAVRE+YEIVP R+W+ EENRM+KIVFI
Sbjct: 312  LEEILWEKKYDMDVYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFI 371

Query: 1083 GQNLQEDILRDSFKACI 1133
            G NL+ED+L  SF+AC+
Sbjct: 372  GHNLKEDVLIHSFRACV 388


>ref|XP_002312279.1| predicted protein [Populus trichocarpa] gi|222852099|gb|EEE89646.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  522 bits (1345), Expect = e-146
 Identities = 264/380 (69%), Positives = 318/380 (83%), Gaps = 6/380 (1%)
 Frame = +3

Query: 21   MELHDDEIPPLAVDIMDPTISK------KXXXXXXXXXXXTIITGYLGSGKSTLVNYILN 182
            ME  +D+ P LAV++ +    K      K           T+ITGYLGSGKSTLVN+ILN
Sbjct: 1    MEKEEDDAP-LAVELEETVPVKPSSSHSKQPQGEDVPVGVTVITGYLGSGKSTLVNHILN 59

Query: 183  DQHGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSFVQALEQL 362
             QHGK+IAVILNEFG+EIGVERAMINEG+ GALVEEWVELANGC+CCTVKHS VQALEQL
Sbjct: 60   TQHGKRIAVILNEFGEEIGVERAMINEGEDGALVEEWVELANGCVCCTVKHSLVQALEQL 119

Query: 363  IQRKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLKHQLTQHRD 542
            +Q KERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNL +QL + ++
Sbjct: 120  VQMKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLHYQLNELQN 179

Query: 543  SSSFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEELEKDIYNINSLASVIHSVRC 722
            SSSFPE +LQIAFAD+IILNK+DL+S   SG    + L+ELE +I+ INSLA++IHSVRC
Sbjct: 180  SSSFPEASLQIAFADVIILNKVDLVSLGGSG----EALKELENEIHKINSLANIIHSVRC 235

Query: 723  QVDLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSSVRTLCISELEEVDLEKVRLW 902
            QVDLSKIL+CRAY++KH  HLE LL E++S+   +LHDSS+RTLCI E ++VDL+KVRLW
Sbjct: 236  QVDLSKILNCRAYDSKHFGHLEVLLEESKSLSTSDLHDSSLRTLCICESQKVDLDKVRLW 295

Query: 903  LEEILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYEIVPVRRWKLEENRMDKIVFI 1082
            LEEILW+KK  MDVYRCKGVL VRNSD++HT+QAVRE+Y+IVP R+W+ +EN+++KIVFI
Sbjct: 296  LEEILWDKKDGMDVYRCKGVLYVRNSDELHTLQAVRELYDIVPARKWRSDENQINKIVFI 355

Query: 1083 GQNLQEDILRDSFKACILPT 1142
            G NL+ED+L +SF+ CI+ T
Sbjct: 356  GHNLKEDVLINSFRDCIVTT 375


>ref|XP_003614041.1| COBW domain-containing protein [Medicago truncatula]
            gi|355515376|gb|AES96999.1| COBW domain-containing
            protein [Medicago truncatula]
          Length = 370

 Score =  518 bits (1333), Expect = e-144
 Identities = 261/377 (69%), Positives = 313/377 (83%), Gaps = 8/377 (2%)
 Frame = +3

Query: 21   MELHDDEIPPLAVDIM----DPTISKKXXXXXXXXXXXTIITGYLGSGKSTLVNYILNDQ 188
            ME  +DE PPLAV+I     D +IS++           T+ITGYLG+GKSTLVN+ILN Q
Sbjct: 1    MEHDEDEEPPLAVEIQQHNNDESISQQSSVGV------TLITGYLGAGKSTLVNHILNSQ 54

Query: 189  HGKKIAVILNEFGDEIGVERAMINEGDGGALVEEWVELANGCICCTVKHSFVQALEQLIQ 368
            HGK+IAVILNEFG+EIGVERA+INEG+ GA+VEEWVELANGCICCTVKHS VQALEQL+Q
Sbjct: 55   HGKRIAVILNEFGEEIGVERALINEGESGAVVEEWVELANGCICCTVKHSLVQALEQLVQ 114

Query: 369  RKERLDHILLETTGLANPAPLASVLWLDDQLESAVKLDSIITVVDAKNLKHQLTQHRDSS 548
            RKERLDHILLETTGLANPAPLAS+LWLD+QLES VKLDSI+TVVDAKN++ QL +HR SS
Sbjct: 115  RKERLDHILLETTGLANPAPLASILWLDEQLESDVKLDSIVTVVDAKNVRFQLKEHRGSS 174

Query: 549  SFPETTLQIAFADLIILNKIDLISPEDSGIGIMDVLEELEKDIYNINSLASVIHSVRCQV 728
            SFPE   QIAFAD++ILNK+DL+S E SG      LEELE++I+NIN+L  +IHSVRCQV
Sbjct: 175  SFPEAYFQIAFADIVILNKVDLVSAEGSG-----ALEELEEEIHNINTLVEIIHSVRCQV 229

Query: 729  DLSKILDCRAYEAKHLAHLESLLRENQSVPIRNLHDSSVRTLCISELEEVDLEKVRLWLE 908
            DLSKIL+  AY+  H AHLE+LL E++S+  + LHDS VRT+CI E   +DL+K R+WLE
Sbjct: 230  DLSKILNRHAYDTAHAAHLEALLEESRSLSTKKLHDSGVRTICICETGTIDLDKTRIWLE 289

Query: 909  EILWEKKHNMDVYRCKGVLNVRNSDQVHTIQAVREIYEIVPVRRWKLEENRMDKIVFIG- 1085
            EILWEKK++MDVYRCKGVLNV+NSD++HT+QAVRE+YEIVP R+WK EENRM+KIVFIG 
Sbjct: 290  EILWEKKYDMDVYRCKGVLNVQNSDELHTLQAVRELYEIVPARKWKKEENRMNKIVFIGN 349

Query: 1086 ---QNLQEDILRDSFKA 1127
                NL+ED+L +S KA
Sbjct: 350  MMSHNLKEDVLINSLKA 366


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