BLASTX nr result
ID: Coptis24_contig00002619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002619 (1261 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273596.1| PREDICTED: peroxisomal membrane protein 11C ... 410 e-112 ref|XP_002889352.1| peroxisomal biogenesis factor 11 family prot... 404 e-110 ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ric... 402 e-109 ref|XP_002320762.1| predicted protein [Populus trichocarpa] gi|1... 401 e-109 ref|NP_001235755.1| peroxisomal biogenesis factor 11 family prot... 400 e-109 >ref|XP_002273596.1| PREDICTED: peroxisomal membrane protein 11C isoform 2 [Vitis vinifera] gi|225453746|ref|XP_002273544.1| PREDICTED: peroxisomal membrane protein 11C isoform 1 [Vitis vinifera] gi|296089071|emb|CBI38774.3| unnamed protein product [Vitis vinifera] Length = 235 Score = 410 bits (1053), Expect = e-112 Identities = 206/234 (88%), Positives = 220/234 (94%) Frame = +3 Query: 261 MSTLDATRAELGLLVLYLNKAEARDKVCRAIQYGSKFISNGEAGTAQNVDKSTSLARKVF 440 MSTLDATRAELGL++LYLNKAEARDK+CRAIQYGSKF+S+G+ GTAQNVDKSTSLARKVF Sbjct: 1 MSTLDATRAELGLVILYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60 Query: 441 RLFKFVNDLHALISPTPQGTPLPIVLLGKSKNALLSTFLFLDQIVWLGRTGIYKNKERAE 620 RLFKFVNDLHALISP PQGTPLP+VLLGKSKNALLSTFLFLDQIVWLGR+GIYKNKERAE Sbjct: 61 RLFKFVNDLHALISPAPQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAE 120 Query: 621 LLGRISLFCWMGSSICTTLVELAELGRLSGSIKKLEKDIKSSDKYQNEQYCEKLKKSNDR 800 +GRISLFCWMGSSIC TLVEL ELGRLS S+KKLEK++K SDKYQNEQY KLKKSN R Sbjct: 121 QIGRISLFCWMGSSICATLVELGELGRLSASMKKLEKELKGSDKYQNEQYRSKLKKSNAR 180 Query: 801 TLALVKASIDIVVAAGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSHPKSKT 962 +LALVKA +D VVA GLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPS PKSKT Sbjct: 181 SLALVKAVMDTVVAVGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSPPKSKT 234 >ref|XP_002889352.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata subsp. lyrata] gi|297335194|gb|EFH65611.1| peroxisomal biogenesis factor 11 family protein [Arabidopsis lyrata subsp. lyrata] Length = 235 Score = 404 bits (1038), Expect = e-110 Identities = 200/234 (85%), Positives = 221/234 (94%) Frame = +3 Query: 261 MSTLDATRAELGLLVLYLNKAEARDKVCRAIQYGSKFISNGEAGTAQNVDKSTSLARKVF 440 MSTL+ TRAELGL+VLYLNKAEARDK+CRAIQYGSKF+S+G+ GTAQNVDKSTSLARKVF Sbjct: 1 MSTLETTRAELGLVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVF 60 Query: 441 RLFKFVNDLHALISPTPQGTPLPIVLLGKSKNALLSTFLFLDQIVWLGRTGIYKNKERAE 620 RLFKFVNDLHALISP P+GTPLP+VLLGKSKNALLSTFLFLDQIVWLGRTGIYK+KERAE Sbjct: 61 RLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAE 120 Query: 621 LLGRISLFCWMGSSICTTLVELAELGRLSGSIKKLEKDIKSSDKYQNEQYCEKLKKSNDR 800 LLGRISLFCWMGSS+CT+LVE+ ELGRLS SIKKLEK+I + DK+QNEQY KL+KSN+R Sbjct: 121 LLGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKLEKSNER 180 Query: 801 TLALVKASIDIVVAAGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSHPKSKT 962 +LAL+KA +D+VVA GLLQLAPKKVTPRVTG FGF SSLISCYQLLPSHPKSKT Sbjct: 181 SLALIKAGMDVVVAFGLLQLAPKKVTPRVTGAFGFASSLISCYQLLPSHPKSKT 234 >ref|XP_002511795.1| peroxisomal biogenesis factor, putative [Ricinus communis] gi|223548975|gb|EEF50464.1| peroxisomal biogenesis factor, putative [Ricinus communis] Length = 235 Score = 402 bits (1033), Expect = e-109 Identities = 199/234 (85%), Positives = 221/234 (94%) Frame = +3 Query: 261 MSTLDATRAELGLLVLYLNKAEARDKVCRAIQYGSKFISNGEAGTAQNVDKSTSLARKVF 440 MSTLDATRAEL LLVLYLNKAEARDK+CRAIQYGSKF+SNG+ GTAQNVDKSTSLARKVF Sbjct: 1 MSTLDATRAELALLVLYLNKAEARDKICRAIQYGSKFLSNGQPGTAQNVDKSTSLARKVF 60 Query: 441 RLFKFVNDLHALISPTPQGTPLPIVLLGKSKNALLSTFLFLDQIVWLGRTGIYKNKERAE 620 RL KFVNDLHALISP QGTPLP+VLLGKSKNALLSTFLFLDQIVWLGR+GIYKNKERA+ Sbjct: 61 RLLKFVNDLHALISPVTQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAD 120 Query: 621 LLGRISLFCWMGSSICTTLVELAELGRLSGSIKKLEKDIKSSDKYQNEQYCEKLKKSNDR 800 L+GRISL+CWMGSS+CTTLVE+ ELGRLS S+KKLEK++K+SDK+QNEQY KL+KSN+R Sbjct: 121 LIGRISLYCWMGSSVCTTLVEIGELGRLSASLKKLEKELKNSDKHQNEQYRAKLQKSNER 180 Query: 801 TLALVKASIDIVVAAGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSHPKSKT 962 +LALVKA++DIVVA GLLQLAPKKV PRVTG FGFV+SLISCYQLLPS PK+KT Sbjct: 181 SLALVKAAMDIVVAVGLLQLAPKKVNPRVTGAFGFVTSLISCYQLLPSQPKAKT 234 >ref|XP_002320762.1| predicted protein [Populus trichocarpa] gi|118489542|gb|ABK96573.1| unknown [Populus trichocarpa x Populus deltoides] gi|222861535|gb|EEE99077.1| predicted protein [Populus trichocarpa] Length = 235 Score = 401 bits (1031), Expect = e-109 Identities = 201/234 (85%), Positives = 219/234 (93%) Frame = +3 Query: 261 MSTLDATRAELGLLVLYLNKAEARDKVCRAIQYGSKFISNGEAGTAQNVDKSTSLARKVF 440 MSTLDATRAEL L+VLYLNKAEARDK+CRAIQYGSKF+S+G+AGTAQNVDKSTSLARKVF Sbjct: 1 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQAGTAQNVDKSTSLARKVF 60 Query: 441 RLFKFVNDLHALISPTPQGTPLPIVLLGKSKNALLSTFLFLDQIVWLGRTGIYKNKERAE 620 RLFKFVNDLH LISP PQGTPLP+VLLGKSKNALLSTFLFLDQIVWLGR+GIYKNKER E Sbjct: 61 RLFKFVNDLHGLISPVPQGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERVE 120 Query: 621 LLGRISLFCWMGSSICTTLVELAELGRLSGSIKKLEKDIKSSDKYQNEQYCEKLKKSNDR 800 L+GRISLFCWMGSSICTTLVE+ ELGRLS S+KKLEK++K +K NEQY KLKKSN+R Sbjct: 121 LIGRISLFCWMGSSICTTLVEVGELGRLSASMKKLEKELKEGEKNHNEQYRAKLKKSNER 180 Query: 801 TLALVKASIDIVVAAGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSHPKSKT 962 +LALVK+++DIVVA GLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPS KSKT Sbjct: 181 SLALVKSAMDIVVAVGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSPQKSKT 234 >ref|NP_001235755.1| peroxisomal biogenesis factor 11 family protein [Glycine max] gi|218117595|dbj|BAH03205.1| peroxisomal biogenesis factor 11 family protein [Glycine max] gi|255632590|gb|ACU16645.1| unknown [Glycine max] Length = 235 Score = 400 bits (1027), Expect = e-109 Identities = 198/234 (84%), Positives = 216/234 (92%) Frame = +3 Query: 261 MSTLDATRAELGLLVLYLNKAEARDKVCRAIQYGSKFISNGEAGTAQNVDKSTSLARKVF 440 MSTLDATRAELGLLVLYL KAEARDK+CRAIQYGSKF+SNGE GTAQNVDK+TSLARKVF Sbjct: 1 MSTLDATRAELGLLVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDKTTSLARKVF 60 Query: 441 RLFKFVNDLHALISPTPQGTPLPIVLLGKSKNALLSTFLFLDQIVWLGRTGIYKNKERAE 620 RLFKFVNDLHALISPTPQGTPLP++LLGKSKNALLSTFLFLDQ VWLGRTGIY+NKER E Sbjct: 61 RLFKFVNDLHALISPTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTE 120 Query: 621 LLGRISLFCWMGSSICTTLVELAELGRLSGSIKKLEKDIKSSDKYQNEQYCEKLKKSNDR 800 L+GRISL+CW+GSS+CTTLVEL ELGRLS S+KKLEKD+K+ +KY NEQY KL KSN+R Sbjct: 121 LIGRISLYCWLGSSVCTTLVELGELGRLSSSMKKLEKDLKNKNKYDNEQYRAKLNKSNER 180 Query: 801 TLALVKASIDIVVAAGLLQLAPKKVTPRVTGGFGFVSSLISCYQLLPSHPKSKT 962 TL+L+KA ID VVA GLLQLAPK VTPRVTG FGFVSSLISCYQLLP+ KSKT Sbjct: 181 TLSLIKAGIDTVVAVGLLQLAPKTVTPRVTGAFGFVSSLISCYQLLPAPAKSKT 234