BLASTX nr result

ID: Coptis24_contig00002617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002617
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ20274.1| putative pectin methylesterase [Nicotiana attenuata]    91   1e-16
gb|AFI23411.1| pectin methylesterase [Coffea arabica]                  90   2e-16
emb|CAB95025.1| pectin methylesterase [Nicotiana tabacum]              89   3e-16
gb|AAF23892.1|AF152172_1 pectin methyl esterase [Solanum tuberosum]    89   5e-16
ref|NP_001233857.1| pectinesterase/pectinesterase inhibitor U1 p...    89   5e-16

>gb|AAZ20274.1| putative pectin methylesterase [Nicotiana attenuata]
          Length = 163

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/76 (57%), Positives = 51/76 (67%)
 Frame = +2

Query: 5   DSDGFPKWLSAGDRRLLXXXXXXXXXXXXXDGSGNYRTXXXXXXXXPEKSSTRYIIRIKA 184
           D+  +P+WLSAGDRRLL             DGSGN+RT        PEKSS RY+IRIKA
Sbjct: 61  DNSEWPEWLSAGDRRLLQSSTVRPDVVVAADGSGNFRTVSEAVARAPEKSSKRYVIRIKA 120

Query: 185 GTYRENVEIPKKKTNI 232
           G YRENV++PKKKTNI
Sbjct: 121 GVYRENVDVPKKKTNI 136


>gb|AFI23411.1| pectin methylesterase [Coffea arabica]
          Length = 587

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/76 (56%), Positives = 52/76 (68%)
 Frame = +2

Query: 5   DSDGFPKWLSAGDRRLLXXXXXXXXXXXXXDGSGNYRTXXXXXXXXPEKSSTRYIIRIKA 184
           +++G+P WLSAGDRRLL             DGSG+++T        PEKSS RY+IRIKA
Sbjct: 252 ETNGWPNWLSAGDRRLLQSSTVTADVVVAADGSGDFKTVSAAVEAAPEKSSRRYVIRIKA 311

Query: 185 GTYRENVEIPKKKTNI 232
           G YRENVE+PKKKTNI
Sbjct: 312 GVYRENVEVPKKKTNI 327


>emb|CAB95025.1| pectin methylesterase [Nicotiana tabacum]
          Length = 579

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 51/76 (67%)
 Frame = +2

Query: 5   DSDGFPKWLSAGDRRLLXXXXXXXXXXXXXDGSGNYRTXXXXXXXXPEKSSTRYIIRIKA 184
           D+  +P+WLSAGDRRLL             DGSGN++T        PEKSS RY+IRIKA
Sbjct: 244 DNSEWPEWLSAGDRRLLQSSTVRPDVVVAADGSGNFKTVSEAVAKAPEKSSKRYVIRIKA 303

Query: 185 GTYRENVEIPKKKTNI 232
           G YRENV++PKKKTNI
Sbjct: 304 GVYRENVDVPKKKTNI 319


>gb|AAF23892.1|AF152172_1 pectin methyl esterase [Solanum tuberosum]
          Length = 576

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/76 (56%), Positives = 51/76 (67%)
 Frame = +2

Query: 5   DSDGFPKWLSAGDRRLLXXXXXXXXXXXXXDGSGNYRTXXXXXXXXPEKSSTRYIIRIKA 184
           D+  +P+WLSAGDRRLL             DGSG+Y+T        PEKSS RY+IRIKA
Sbjct: 241 DNGEWPEWLSAGDRRLLQSSTVTPDVVVAADGSGDYKTVSEAVAKAPEKSSKRYVIRIKA 300

Query: 185 GTYRENVEIPKKKTNI 232
           G YRENV++PKKKTNI
Sbjct: 301 GVYRENVDVPKKKTNI 316


>ref|NP_001233857.1| pectinesterase/pectinesterase inhibitor U1 precursor [Solanum
           lycopersicum] gi|6093740|sp|Q43143.1|PMEU1_SOLLC
           RecName: Full=Pectinesterase/pectinesterase inhibitor
           U1; Includes: RecName: Full=Pectinesterase inhibitor U1;
           AltName: Full=Pectin methylesterase inhibitor U1;
           Includes: RecName: Full=Pectinesterase U1; Short=PE U1;
           AltName: Full=Pectin methylesterase U1; Flags: Precursor
           gi|1222552|gb|AAD09283.1| pectin methylesterase [Solanum
           lycopersicum] gi|15667247|gb|AAL02367.1| pectin
           methylesterase [Solanum lycopersicum]
          Length = 583

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/76 (56%), Positives = 51/76 (67%)
 Frame = +2

Query: 5   DSDGFPKWLSAGDRRLLXXXXXXXXXXXXXDGSGNYRTXXXXXXXXPEKSSTRYIIRIKA 184
           D+  +P+WLSAGDRRLL             DGSG+Y+T        PEKSS RY+IRIKA
Sbjct: 248 DNGEWPEWLSAGDRRLLQSSTVTPDVVVAADGSGDYKTVSEAVRKAPEKSSKRYVIRIKA 307

Query: 185 GTYRENVEIPKKKTNI 232
           G YRENV++PKKKTNI
Sbjct: 308 GVYRENVDVPKKKTNI 323


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