BLASTX nr result
ID: Coptis24_contig00002609
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002609 (524 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera] 140 1e-31 emb|CBI33773.3| unnamed protein product [Vitis vinifera] 139 3e-31 ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera] 139 3e-31 ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223... 132 4e-29 ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera] 128 4e-28 >emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera] Length = 372 Score = 140 bits (353), Expect = 1e-31 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%) Frame = +2 Query: 2 TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFL 175 TMLH+I +VEPCN +EYQ+QL+ +LKISK+ V+DCY+LIL+ L +GH N KRK L Sbjct: 250 TMLHIITEVEPCNPLEYQNQLLSVLKISKBDVDDCYKLILE-FLGXHGHTQNQTHKRKHL 308 Query: 176 SIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVL 355 S+PSSP+G+ D FSC+ +PLFKKSRAQDQQMRLPS NRV VDVL Sbjct: 309 SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 368 Query: 356 STP 364 S+P Sbjct: 369 SSP 371 >emb|CBI33773.3| unnamed protein product [Vitis vinifera] Length = 309 Score = 139 bits (349), Expect = 3e-31 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%) Frame = +2 Query: 2 TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFL 175 TMLH+I +VEPCN +EYQ+QL+ +LKISK+ V+DCY+LIL+ L +GH N KRK L Sbjct: 187 TMLHIITEVEPCNPLEYQNQLLSVLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHL 245 Query: 176 SIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVL 355 S+PSSP+G+ D FSC+ +PLFKKSRAQDQQMRLPS NRV VDVL Sbjct: 246 SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 305 Query: 356 STP 364 S+P Sbjct: 306 SSP 308 >ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera] Length = 372 Score = 139 bits (349), Expect = 3e-31 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%) Frame = +2 Query: 2 TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFL 175 TMLH+I +VEPCN +EYQ+QL+ +LKISK+ V+DCY+LIL+ L +GH N KRK L Sbjct: 250 TMLHIITEVEPCNPLEYQNQLLSVLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHL 308 Query: 176 SIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVL 355 S+PSSP+G+ D FSC+ +PLFKKSRAQDQQMRLPS NRV VDVL Sbjct: 309 SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 368 Query: 356 STP 364 S+P Sbjct: 369 SSP 371 >ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223535754|gb|EEF37416.1| cyclin d, putative [Ricinus communis] Length = 276 Score = 132 bits (331), Expect = 4e-29 Identities = 67/120 (55%), Positives = 88/120 (73%) Frame = +2 Query: 5 MLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNSKRKFLSIP 184 MLHVI++VEPCN ++YQ+QLM ++KIS+++VN+CY+LIL+ LS N + + KRK S+P Sbjct: 159 MLHVIKEVEPCNQVQYQNQLMSVIKISENKVNECYKLILE--LSGNQNK-SCKRKHPSMP 215 Query: 185 SSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 364 SPNG+ID FSC+ P PLFK+SR QDQQMRLPS NR+FVDVLS+P Sbjct: 216 RSPNGIIDAYFSCDSSNDSWNLSSTVSSSPVPLFKRSRTQDQQMRLPSLNRMFVDVLSSP 275 >ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera] Length = 386 Score = 128 bits (322), Expect = 4e-28 Identities = 69/127 (54%), Positives = 83/127 (65%), Gaps = 5/127 (3%) Frame = +2 Query: 2 TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS----KRK 169 TMLHVI VEPCN IEYQ+QL+ ILKI KD+V +C+QLI++ N H Y KRK Sbjct: 262 TMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVE---VSNTHFYAQNNPHKRK 318 Query: 170 FLSIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXP-EPLFKKSRAQDQQMRLPSFNRVFV 346 + IP SPNGV+D FSC+ P +PLFKKSR Q+QQMRLPS NRVFV Sbjct: 319 YTKIPGSPNGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFV 378 Query: 347 DVLSTPP 367 DV+ + P Sbjct: 379 DVIGSSP 385