BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002609
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]   140   1e-31
emb|CBI33773.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]           139   3e-31
ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223...   132   4e-29
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      128   4e-28

>emb|CAN59802.1| hypothetical protein VITISV_038874 [Vitis vinifera]
          Length = 372

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFL 175
           TMLH+I +VEPCN +EYQ+QL+ +LKISK+ V+DCY+LIL+  L  +GH  N   KRK L
Sbjct: 250 TMLHIITEVEPCNPLEYQNQLLSVLKISKBDVDDCYKLILE-FLGXHGHTQNQTHKRKHL 308

Query: 176 SIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVL 355
           S+PSSP+G+ D  FSC+                +PLFKKSRAQDQQMRLPS NRV VDVL
Sbjct: 309 SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 368

Query: 356 STP 364
           S+P
Sbjct: 369 SSP 371


>emb|CBI33773.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFL 175
           TMLH+I +VEPCN +EYQ+QL+ +LKISK+ V+DCY+LIL+  L  +GH  N   KRK L
Sbjct: 187 TMLHIITEVEPCNPLEYQNQLLSVLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHL 245

Query: 176 SIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVL 355
           S+PSSP+G+ D  FSC+                +PLFKKSRAQDQQMRLPS NRV VDVL
Sbjct: 246 SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 305

Query: 356 STP 364
           S+P
Sbjct: 306 SSP 308


>ref|XP_002283380.1| PREDICTED: cyclin-D3-2 [Vitis vinifera]
          Length = 372

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS--KRKFL 175
           TMLH+I +VEPCN +EYQ+QL+ +LKISK+ V+DCY+LIL+  L  +GH  N   KRK L
Sbjct: 250 TMLHIITEVEPCNPLEYQNQLLSVLKISKNDVDDCYKLILE-FLGSHGHTQNQTHKRKHL 308

Query: 176 SIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVL 355
           S+PSSP+G+ D  FSC+                +PLFKKSRAQDQQMRLPS NRV VDVL
Sbjct: 309 SLPSSPSGIFDAPFSCDSSSDSWAMATSISSSSQPLFKKSRAQDQQMRLPSLNRVSVDVL 368

Query: 356 STP 364
           S+P
Sbjct: 369 SSP 371


>ref|XP_002524919.1| cyclin d, putative [Ricinus communis] gi|223535754|gb|EEF37416.1|
           cyclin d, putative [Ricinus communis]
          Length = 276

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/120 (55%), Positives = 88/120 (73%)
 Frame = +2

Query: 5   MLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNSKRKFLSIP 184
           MLHVI++VEPCN ++YQ+QLM ++KIS+++VN+CY+LIL+  LS N +  + KRK  S+P
Sbjct: 159 MLHVIKEVEPCNQVQYQNQLMSVIKISENKVNECYKLILE--LSGNQNK-SCKRKHPSMP 215

Query: 185 SSPNGVIDVSFSCEXXXXXXXXXXXXXXXPEPLFKKSRAQDQQMRLPSFNRVFVDVLSTP 364
            SPNG+ID  FSC+               P PLFK+SR QDQQMRLPS NR+FVDVLS+P
Sbjct: 216 RSPNGIIDAYFSCDSSNDSWNLSSTVSSSPVPLFKRSRTQDQQMRLPSLNRMFVDVLSSP 275


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  128 bits (322), Expect = 4e-28
 Identities = 69/127 (54%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
 Frame = +2

Query: 2   TMLHVIEQVEPCNVIEYQDQLMDILKISKDRVNDCYQLILDSVLSYNGHVYNS----KRK 169
           TMLHVI  VEPCN IEYQ+QL+ ILKI KD+V +C+QLI++     N H Y      KRK
Sbjct: 262 TMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVE---VSNTHFYAQNNPHKRK 318

Query: 170 FLSIPSSPNGVIDVSFSCEXXXXXXXXXXXXXXXP-EPLFKKSRAQDQQMRLPSFNRVFV 346
           +  IP SPNGV+D  FSC+               P +PLFKKSR Q+QQMRLPS NRVFV
Sbjct: 319 YTKIPGSPNGVMDAYFSCDSSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSLNRVFV 378

Query: 347 DVLSTPP 367
           DV+ + P
Sbjct: 379 DVIGSSP 385