BLASTX nr result

ID: Coptis24_contig00002607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002607
         (1692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263976.1| PREDICTED: WD repeat domain phosphoinositide...   502   e-139
ref|XP_002283982.1| PREDICTED: WD repeat domain phosphoinositide...   489   e-136
ref|XP_004136045.1| PREDICTED: WD repeat domain phosphoinositide...   488   e-135
ref|NP_567132.4| transducin/WD40 domain-containing protein [Arab...   483   e-134
ref|XP_003591137.1| WD repeat domain phosphoinositide-interactin...   480   e-133

>ref|XP_002263976.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 3
            [Vitis vinifera]
          Length = 439

 Score =  502 bits (1293), Expect = e-139
 Identities = 260/376 (69%), Positives = 288/376 (76%), Gaps = 5/376 (1%)
 Frame = -2

Query: 1442 VENPNPN--DPSSHLEVSSYPSLLHLSFNQDHGCFAVGTDNGFRIFNCDPFXXXXXXXXX 1269
            V++PN N  +  S+   SS PSLLH+SFNQDHGCFA GTDNGFRI+NCDPF         
Sbjct: 69   VQSPNSNLREVVSY-STSSIPSLLHISFNQDHGCFAAGTDNGFRIYNCDPFREIFRRDFD 127

Query: 1268 XXXXXXXXEMLFRCNILAIVXXXXXXGLNLQYPLNKVMIWDDHQNRCIGELSFRSDVKAX 1089
                    EMLFRCNILA+V          QYPLNKVMIWDDHQ+RCIGELSFRS+V+A 
Sbjct: 128  RGGGIGVVEMLFRCNILALVGGGPEP----QYPLNKVMIWDDHQSRCIGELSFRSEVRAV 183

Query: 1088 XXXXXXXXXXLEHKIMVYNFADLKLLHQIETRLNPKGLCEVSQGSGSFVLVCPGLQKGQV 909
                      LE KI +YNFADLKLLHQIET  NP+GLC VSQ + S VLVCPGLQKGQV
Sbjct: 184  KLRRDRIIVVLEQKIFLYNFADLKLLHQIETIANPRGLCAVSQLTASLVLVCPGLQKGQV 243

Query: 908  RVEHYGSKRTKFIVAHDSRIACFALTQDGQIVATCSSKGTLVRIFNTLDGTLLQEVRRGA 729
            RVEHY S+RTKF  AHDSR+ACFALT DGQ++AT S+KGTLVRIFNT DGT LQEVRRGA
Sbjct: 244  RVEHYASRRTKFFAAHDSRLACFALTTDGQLLATASTKGTLVRIFNTSDGTRLQEVRRGA 303

Query: 728  DRAEIYSLAFSPTAQWLAVSSDKGTVHVFGLKVNSAMERNEKPH---XXXXXXXXXXXXX 558
            DRAE+YS+AFS TAQWLAVSSDKGTVHVFGLKVNS    N+K H                
Sbjct: 304  DRAEVYSMAFSSTAQWLAVSSDKGTVHVFGLKVNSGSLGNDKSHGASDANLAVASSGLSL 363

Query: 557  SFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKNTIVILGLDGSFYRCEFNPESGGE 378
            SFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKNT+VILG+DGSFYRC+F+P +GGE
Sbjct: 364  SFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPVTGGE 423

Query: 377  MIQLEYYNFLKPQETF 330
            M QLEY+NFLKP+E F
Sbjct: 424  MTQLEYHNFLKPEEAF 439


>ref|XP_002283982.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
            3-like isoform 1 [Vitis vinifera]
          Length = 425

 Score =  489 bits (1260), Expect = e-136
 Identities = 254/361 (70%), Positives = 277/361 (76%), Gaps = 8/361 (2%)
 Frame = -2

Query: 1388 PSLLHLSFNQDHGCFAVGTDNGFRIFNCDPFXXXXXXXXXXXXXXXXXE-----MLFRCN 1224
            P+LLHLSFNQDHGCF+ GTD+GFRI+NCDPF                       MLFRCN
Sbjct: 69   PTLLHLSFNQDHGCFSAGTDHGFRIYNCDPFREIFRRDFCGDDGGSGTGIGVVEMLFRCN 128

Query: 1223 ILAIVXXXXXXGLNLQYPLNKVMIWDDHQNRCIGELSFRSDVKAXXXXXXXXXXXLEHKI 1044
            ILA+V          QYP NKVMIWDDHQ RCIGELSFRS+VK+           L  KI
Sbjct: 129  ILALVGGGPDP----QYPPNKVMIWDDHQTRCIGELSFRSEVKSVRLRRDRIVAILLQKI 184

Query: 1043 MVYNFADLKLLHQIETRLNPKGLCEVSQGSGSFVLVCPGLQKGQVRVEHYGSKRTKFIVA 864
             VYNFADLKLLHQIET  NPKGLCEVSQ SGS VLVCPGL KGQVRVEHY SKRTKFI+A
Sbjct: 185  FVYNFADLKLLHQIETIANPKGLCEVSQLSGSMVLVCPGLLKGQVRVEHYNSKRTKFIMA 244

Query: 863  HDSRIACFALTQDGQIVATCSSKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSPTAQ 684
            HDSRIACFALTQDG+++AT SSKGTLVRIFNTLDGTLLQEVRRGADRAEIYS+AFS +AQ
Sbjct: 245  HDSRIACFALTQDGRLLATSSSKGTLVRIFNTLDGTLLQEVRRGADRAEIYSVAFSSSAQ 304

Query: 683  WLAVSSDKGTVHVFGLKVNS---AMERNEKPHXXXXXXXXXXXXXSFIKGVLPKYFSSEW 513
            WLAVSSDKGTVHVF LKV S     +R+                 SF+KGVLP+YFSSEW
Sbjct: 305  WLAVSSDKGTVHVFSLKVESGSLGSDRSRSSSEPNLSVPSAVSSLSFMKGVLPRYFSSEW 364

Query: 512  SVAQFRLHEGSQYIVAFGHQKNTIVILGLDGSFYRCEFNPESGGEMIQLEYYNFLKPQET 333
            SVAQFRLHEGSQYIVAFGHQKNT+VILG+DGSFYRC+F+P +GGEM QLEYYNFLKP+ET
Sbjct: 365  SVAQFRLHEGSQYIVAFGHQKNTVVILGMDGSFYRCQFDPVAGGEMTQLEYYNFLKPEET 424

Query: 332  F 330
            F
Sbjct: 425  F 425


>ref|XP_004136045.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
            3-like [Cucumis sativus] gi|449533312|ref|XP_004173620.1|
            PREDICTED: WD repeat domain phosphoinositide-interacting
            protein 3-like [Cucumis sativus]
          Length = 420

 Score =  488 bits (1256), Expect = e-135
 Identities = 259/397 (65%), Positives = 281/397 (70%), Gaps = 28/397 (7%)
 Frame = -2

Query: 1436 NPNPNDPSSHLEVSS--------------------------YPSLLHLSFNQDHGCFAVG 1335
            NPNPN PS+  + SS                           PSLLHLSFNQDHGCFA G
Sbjct: 28   NPNPNPPSAVADSSSSERFDSDSVSSVDPTGLSPAVEPPASQPSLLHLSFNQDHGCFAAG 87

Query: 1334 TDNGFRIFNCDPFXXXXXXXXXXXXXXXXXEMLFRCNILAIVXXXXXXGLNLQYPLNKVM 1155
            TD GFRI+NCDPF                 EMLFRCNILA+V          QYP NKVM
Sbjct: 88   TDRGFRIYNCDPFREIFRRDFDRGGGVGVVEMLFRCNILALVGGGPDP----QYPPNKVM 143

Query: 1154 IWDDHQNRCIGELSFRSDVKAXXXXXXXXXXXLEHKIMVYNFADLKLLHQIETRLNPKGL 975
            IWDDHQ+RCIGELSFRS V+            LE K+ VYNFADLKLLHQIET  NPKGL
Sbjct: 144  IWDDHQSRCIGELSFRSAVRGVRLQRDRIIVILEQKVFVYNFADLKLLHQIETIANPKGL 203

Query: 974  CEVSQGSGSFVLVCPGLQKGQVRVEHYGSKRTKFIVAHDSRIACFALTQDGQIVATCSSK 795
            C VSQ S S VLVCPGLQKGQVRVEHY S+RTKFI+AHDSRIACFALT +GQ++AT S+K
Sbjct: 204  CAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMAHDSRIACFALTTNGQLLATASTK 263

Query: 794  GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFGLKVNSAME 615
            GTLVRIFNT DG LLQEVRRGADRAEIYSLAFS TAQWLAVSSDKGTVHVF LKVNS   
Sbjct: 264  GTLVRIFNTFDGNLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSGSL 323

Query: 614  RNEKPH--XXXXXXXXXXXXXSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKNTI 441
             N+  H               SFIKGVLPKYF SEWSVAQFRLHEGSQY+VAFGHQKNT+
Sbjct: 324  GNDMSHQNDSSLSVAPSGSSFSFIKGVLPKYFKSEWSVAQFRLHEGSQYVVAFGHQKNTV 383

Query: 440  VILGLDGSFYRCEFNPESGGEMIQLEYYNFLKPQETF 330
            VILG+DGSFYRC+F+  +GGEM QLEY+NFL P+E F
Sbjct: 384  VILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF 420


>ref|NP_567132.4| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|14517420|gb|AAK62600.1| AT3g62770/F26K9_200
            [Arabidopsis thaliana] gi|16323362|gb|AAL15394.1|
            AT3g62770/F26K9_200 [Arabidopsis thaliana]
            gi|332646868|gb|AEE80389.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 425

 Score =  483 bits (1243), Expect = e-134
 Identities = 254/384 (66%), Positives = 282/384 (73%), Gaps = 2/384 (0%)
 Frame = -2

Query: 1475 SAQPNFTLISYVENPNP-NDPSSHLEVSSYPSLLHLSFNQDHGCFAVGTDNGFRIFNCDP 1299
            S +PN T      N +P + P+ +L V   PS+LHLSFNQDH CFAVGTD GFRI NCDP
Sbjct: 51   SDEPNQT-----SNQSPLSPPTPNLPVMPPPSVLHLSFNQDHACFAVGTDRGFRILNCDP 105

Query: 1298 FXXXXXXXXXXXXXXXXXEMLFRCNILAIVXXXXXXGLNLQYPLNKVMIWDDHQNRCIGE 1119
            F                 EMLFRCNILA+V          QYP NKVMIWDDHQ RCIGE
Sbjct: 106  FREIFRRDFDRGGGVAVVEMLFRCNILALVGGGPDP----QYPPNKVMIWDDHQGRCIGE 161

Query: 1118 LSFRSDVKAXXXXXXXXXXXLEHKIMVYNFADLKLLHQIETRLNPKGLCEVSQGSGSFVL 939
            LSFRSDV++           LE KI VYNF+DLKL+HQIET  NPKGLC VSQG GS VL
Sbjct: 162  LSFRSDVRSVRLRRDRIIVVLEQKIFVYNFSDLKLMHQIETIANPKGLCAVSQGVGSMVL 221

Query: 938  VCPGLQKGQVRVEHYGSKRTKFIVAHDSRIACFALTQDGQIVATCSSKGTLVRIFNTLDG 759
            VCPGLQKGQVR+EHY SKRTKF++AHDSRIACFALTQDG ++AT SSKGTLVRIFNT+DG
Sbjct: 222  VCPGLQKGQVRIEHYASKRTKFVMAHDSRIACFALTQDGHLLATASSKGTLVRIFNTVDG 281

Query: 758  TLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFGLKVNSAME-RNEKPHXXXXX 582
            TL QEVRRGADRAEIYSLAFS  AQWLAVSSDKGTVHVFGLKVNS  + ++         
Sbjct: 282  TLRQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFGLKVNSGSQVKDSSRIAPDAT 341

Query: 581  XXXXXXXXSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKNTIVILGLDGSFYRCE 402
                    S  KGVLP+YFSSEWSVAQFRL EG+QYI AFGHQKNT+VILG+DGSFYRC+
Sbjct: 342  PSSPSSSLSLFKGVLPRYFSSEWSVAQFRLVEGTQYIAAFGHQKNTVVILGMDGSFYRCQ 401

Query: 401  FNPESGGEMIQLEYYNFLKPQETF 330
            F+P +GGEM QLEY+N LKP   F
Sbjct: 402  FDPVNGGEMSQLEYHNCLKPPSVF 425


>ref|XP_003591137.1| WD repeat domain phosphoinositide-interacting protein [Medicago
            truncatula] gi|355480185|gb|AES61388.1| WD repeat domain
            phosphoinositide-interacting protein [Medicago
            truncatula]
          Length = 385

 Score =  480 bits (1236), Expect = e-133
 Identities = 247/371 (66%), Positives = 279/371 (75%), Gaps = 3/371 (0%)
 Frame = -2

Query: 1433 PNPNDPSSHLEVSSYPSLLHLSFNQDHGCFAVGTDNGFRIFNCDPFXXXXXXXXXXXXXX 1254
            P P  P+  L  +S  ++LHLSFNQD GCFA GTD+GFRI+NCDPF              
Sbjct: 21   PIPTSPNPPLNSTS--NVLHLSFNQDSGCFAAGTDHGFRIYNCDPFREIFRRDFGPNGGI 78

Query: 1253 XXXEMLFRCNILAIVXXXXXXGLNLQYPLNKVMIWDDHQNRCIGELSFRSDVKAXXXXXX 1074
                MLFRCNILA V          +YP NKVMIWDDHQ+RCIGELSFRS+VK       
Sbjct: 79   GLVHMLFRCNILAFVGGGSDP----RYPANKVMIWDDHQSRCIGELSFRSEVKGVRLRRD 134

Query: 1073 XXXXXLEHKIMVYNFADLKLLHQIETRLNPKGLCEVSQGSGSFVLVCPGLQKGQVRVEHY 894
                 L HKI VYNFADLK+LHQIET  NP GLCEVS  SG+ VL CPGLQKGQ+RVEHY
Sbjct: 135  RIVVVLAHKIFVYNFADLKVLHQIETIANPTGLCEVSHVSGTMVLACPGLQKGQIRVEHY 194

Query: 893  GSKRTKFIVAHDSRIACFALTQDGQIVATCSSKGTLVRIFNTLDGTLLQEVRRGADRAEI 714
             SKRTKFI+AHDSRIACFA+TQDG+++AT SSKGTLVR+FNTLDG+LLQEVRRGADRAEI
Sbjct: 195  ASKRTKFIMAHDSRIACFAITQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEI 254

Query: 713  YSLAFSPTAQWLAVSSDKGTVHVFGLKVNSAMERNEKPH---XXXXXXXXXXXXXSFIKG 543
            YSLAFS +AQWLAVSSDKGTVHVF LKV+S +  +++ H                SFI+G
Sbjct: 255  YSLAFSSSAQWLAVSSDKGTVHVFNLKVDSGLLGHDRSHTTSESSPTSPSAASSLSFIRG 314

Query: 542  VLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKNTIVILGLDGSFYRCEFNPESGGEMIQLE 363
            VLP+YFSSEWSVAQFRL EG QY VAFGHQKNTIVILG+DGSFYRC+F+  +GGEM QLE
Sbjct: 315  VLPRYFSSEWSVAQFRLQEGLQYHVAFGHQKNTIVILGMDGSFYRCQFDTVTGGEMTQLE 374

Query: 362  YYNFLKPQETF 330
            YYNFLKP+ETF
Sbjct: 375  YYNFLKPEETF 385


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