BLASTX nr result
ID: Coptis24_contig00002606
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002606 (777 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4... 71 2e-10 gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-... 71 2e-10 gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays] 71 3e-10 ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S... 69 9e-10 ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-... 69 1e-09 >ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain containing protein [Zea mays] Length = 294 Score = 71.2 bits (173), Expect = 2e-10 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%) Frame = +1 Query: 76 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 252 K+IG LQ L+ M VDE I+ D L V +CCP+F++LKV V + A +I LP+L Sbjct: 140 KAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198 Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432 K L+I S ++ ++ L +LE LDI+ +L+ RL+VF W++ + Sbjct: 199 KKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWNSKFE 257 Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531 CS C E N ++ Q PC +M+ ++ G Sbjct: 258 LGEFMDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292 >gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain containing protein [Zea mays] Length = 294 Score = 71.2 bits (173), Expect = 2e-10 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%) Frame = +1 Query: 76 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 252 K+IG LQ L+ M VDE I+ D L V +CCP+F++LKV V + A +I LP+L Sbjct: 140 KAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198 Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432 K L+I S ++ ++ L +LE LDI+ +L+ RL+VF W++ + Sbjct: 199 KKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWNSKFE 257 Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531 CS C E N ++ Q PC +M+ ++ G Sbjct: 258 LGEFMDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292 >gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays] Length = 236 Score = 70.9 bits (172), Expect = 3e-10 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 5/161 (3%) Frame = +1 Query: 64 TTIGKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATF 240 T K+IG LQ L+ M VDE I+ D L V +CCP+F+ LKV V + A +I Sbjct: 78 TKFCKAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVGLKVSALYVDEEMASVICNS 136 Query: 241 LPKLKILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWD 420 LP+LK L+I S ++ ++ L +LE LDI+ +L+ RL+VF W+ Sbjct: 137 LPRLKKLEIPSCDMSSATIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWN 195 Query: 421 NAYS----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531 + + CS C E N ++ Q PC +M+ ++ G Sbjct: 196 SKFELGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 234 >ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor] gi|241918198|gb|EER91342.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor] Length = 297 Score = 69.3 bits (168), Expect = 9e-10 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 5/157 (3%) Frame = +1 Query: 76 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 252 K+IG L L+ M VDE I+ D L V +CCP+F++LKV V + A +I LP+L Sbjct: 140 KAIGGLHSLKGMAVDETLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198 Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432 K L+I S ++ ++ L ELE LDI+ +L+ RL+ F W++ + Sbjct: 199 KKLEIPSADMSSAAIIKFLDCLEELEHLDISGYETSAISSLVLE-KASRLKFFLWNSKFE 257 Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531 CS C E N ++ Q PC +M+ ++ G Sbjct: 258 LGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292 >ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-like [Brachypodium distachyon] Length = 297 Score = 68.6 bits (166), Expect = 1e-09 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 5/157 (3%) Frame = +1 Query: 76 KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-CNSVCKNTALLIATFLPKL 252 K IG LQ L M VDE I+ D L V +CCPNF++LKV V ++ A +I LP+L Sbjct: 140 KVIGKLQYLRGMAVDESLINYD-VLLHVYQCCPNFLELKVFAVYVDEDMASIICDCLPRL 198 Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432 K L+I ++++ ++ L ELE +DI+ +L RL+VF W++ + Sbjct: 199 KKLEIPNSDMSCAAIIKFLDCLEELEYMDISGYETSVISSSVLH-KASRLKVFVWNSKFE 257 Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531 CS C E + ++ Q PC +D ++ G Sbjct: 258 LGEFKDCSNCGEHS--INPQEPCKCTIDHKVMDWLAG 292