BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002606
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...    71   2e-10
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...    71   2e-10
gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays]         71   3e-10
ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S...    69   9e-10
ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-...    69   1e-09

>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
 Frame = +1

Query: 76  KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 252
           K+IG LQ L+ M VDE  I+ D  L  V +CCP+F++LKV    V +  A +I   LP+L
Sbjct: 140 KAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198

Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432
           K L+I S ++    ++  L    +LE LDI+          +L+    RL+VF W++ + 
Sbjct: 199 KKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWNSKFE 257

Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531
                 CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 258 LGEFMDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
 Frame = +1

Query: 76  KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 252
           K+IG LQ L+ M VDE  I+ D  L  V +CCP+F++LKV    V +  A +I   LP+L
Sbjct: 140 KAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198

Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432
           K L+I S ++    ++  L    +LE LDI+          +L+    RL+VF W++ + 
Sbjct: 199 KKLEIPSCDMSSAAIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWNSKFE 257

Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531
                 CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 258 LGEFMDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292


>gb|AFW81196.1| hypothetical protein ZEAMMB73_238623 [Zea mays]
          Length = 236

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
 Frame = +1

Query: 64  TTIGKSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATF 240
           T   K+IG LQ L+ M VDE  I+ D  L  V +CCP+F+ LKV    V +  A +I   
Sbjct: 78  TKFCKAIGGLQSLKGMAVDESLINYD-VLLHVHQCCPDFVGLKVSALYVDEEMASVICNS 136

Query: 241 LPKLKILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWD 420
           LP+LK L+I S ++    ++  L    +LE LDI+          +L+    RL+VF W+
Sbjct: 137 LPRLKKLEIPSCDMSSATIIRFLDCLEQLEHLDISGYETSAISSPVLE-KASRLKVFLWN 195

Query: 421 NAYS----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531
           + +       CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 196 SKFELGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 234


>ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor]
           gi|241918198|gb|EER91342.1| hypothetical protein
           SORBIDRAFT_01g016660 [Sorghum bicolor]
          Length = 297

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
 Frame = +1

Query: 76  KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKVCNS-VCKNTALLIATFLPKL 252
           K+IG L  L+ M VDE  I+ D  L  V +CCP+F++LKV    V +  A +I   LP+L
Sbjct: 140 KAIGGLHSLKGMAVDETLINYD-VLLHVHQCCPDFVELKVSALYVDEEMASVICNSLPRL 198

Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432
           K L+I S ++    ++  L    ELE LDI+          +L+    RL+ F W++ + 
Sbjct: 199 KKLEIPSADMSSAAIIKFLDCLEELEHLDISGYETSAISSLVLE-KASRLKFFLWNSKFE 257

Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531
                 CS C E N  ++ Q PC  +M+     ++ G
Sbjct: 258 LGEFVDCSNCGEHN--INPQEPCKCMMEHKVMDWLAG 292


>ref|XP_003562356.1| PREDICTED: putative F-box protein At4g05475-like [Brachypodium
           distachyon]
          Length = 297

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
 Frame = +1

Query: 76  KSIGNLQVLESMEVDEVFISDDSTLKQVSECCPNFIKLKV-CNSVCKNTALLIATFLPKL 252
           K IG LQ L  M VDE  I+ D  L  V +CCPNF++LKV    V ++ A +I   LP+L
Sbjct: 140 KVIGKLQYLRGMAVDESLINYD-VLLHVYQCCPNFLELKVFAVYVDEDMASIICDCLPRL 198

Query: 253 KILDISSTNIHRKDLLVILKGCVELESLDITNCGKIHSDDEILKIGCRRLEVFKWDNAYS 432
           K L+I ++++    ++  L    ELE +DI+          +L     RL+VF W++ + 
Sbjct: 199 KKLEIPNSDMSCAAIIKFLDCLEELEYMDISGYETSVISSSVLH-KASRLKVFVWNSKFE 257

Query: 433 ----DYCSECEEENEDMSYQWPCAHVMDEGFSTYIEG 531
                 CS C E +  ++ Q PC   +D     ++ G
Sbjct: 258 LGEFKDCSNCGEHS--INPQEPCKCTIDHKVMDWLAG 292