BLASTX nr result

ID: Coptis24_contig00002600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002600
         (1572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514530.1| conserved hypothetical protein [Ricinus comm...   201   4e-49
ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|2...   197   8e-48
ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-47
ref|XP_004135128.1| PREDICTED: uncharacterized protein LOC101207...   190   1e-45
emb|CBI27124.3| unnamed protein product [Vitis vinifera]              168   4e-39

>ref|XP_002514530.1| conserved hypothetical protein [Ricinus communis]
            gi|223546134|gb|EEF47636.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  201 bits (511), Expect = 4e-49
 Identities = 150/421 (35%), Positives = 205/421 (48%), Gaps = 49/421 (11%)
 Frame = -1

Query: 1380 MKDRGKAVAVXXXXXXXXXXXXXSELPCKKHPFSSSVGICAYCLKDRLIKLVCSDCGEQR 1201
            MK+RGKAV V              +LPCKKHP SSSVGICAYCLKDRL+KLVCSDCGEQR
Sbjct: 1    MKERGKAVEVFNDDQEYYTSSYY-DLPCKKHPSSSSVGICAYCLKDRLVKLVCSDCGEQR 59

Query: 1200 LXXXXXXXXXXSYPNSSSVVDIGSVGRISFLIEND----------KDGFXXXXXXXXXXX 1051
            L          +   +S  V++GSVGRISFLIEND             F           
Sbjct: 60   LSSCSCSEISSN--RNSCTVEVGSVGRISFLIENDNQRNEGNSSSSSQFQSQANSNKPKI 117

Query: 1050 XXXXXXXSTVLLKRSSSTSTSVDVKRGSFWKFGRLFRKKR--GVIENN----------VD 907
                      LLKRSSS+   +  K G FW+ G+LF KKR  G  +NN          V 
Sbjct: 118  CREKTTDDVFLLKRSSSSCVEIKRKSG-FWRIGKLFSKKREKGNNDNNNNNNNCERSSVG 176

Query: 906  GVDEKSEMWDLESMGVSRSRSVCGFRGG--FDDSEGNI-----TLSTGRPSVL------- 769
            G +EKS++W ++ MGVSRSRS+C FRGG  F   +G       ++S  R S+        
Sbjct: 177  GFEEKSDLWVVDYMGVSRSRSLCSFRGGGFFGSEDGTFSGARSSMSAARSSISAARNSGV 236

Query: 768  ---------KKDGHADSEKKKS---GGKIDRLFQSEDVFGCVKRDGPSMVSENGSKSIRK 625
                     +K G +++E +KS   G K D +   E +  C   + P  V      S++ 
Sbjct: 237  NGGLLFDPDRKSGFSEAEPRKSGYDGEKKDTVLDPEKLDSCYGTNNPRRVF-----SLK- 290

Query: 624  GGLIEFDGSFSVDEDPGFIDLKLGL-SSESKPEFSCLKNDNFLKSASSFITRDGNLSGDE 448
                  +G+F+  +D GFIDLK    SS+SK E   +       + S  I+  G++ G +
Sbjct: 291  ------EGNFTTIDDSGFIDLKFDFPSSDSKSELPYIVKMGGGGALSDSISAFGSMRGGD 344

Query: 447  SQSFDYFREGMLGNGTSCRITVNNNEIXXXXXXXXXXKWIVKHHSSTAGRPSWQKDEHDS 268
              + D++ +G+  NG SCRITV++  I          +WI +        P+ +K E D 
Sbjct: 345  FLAQDHYSDGLFSNGGSCRITVSDRGIKRSRKSFKSWRWIFR-----PNHPNAKKKEEDQ 399

Query: 267  K 265
            +
Sbjct: 400  E 400


>ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|222865017|gb|EEF02148.1|
            predicted protein [Populus trichocarpa]
          Length = 397

 Score =  197 bits (500), Expect = 8e-48
 Identities = 145/409 (35%), Positives = 201/409 (49%), Gaps = 39/409 (9%)
 Frame = -1

Query: 1380 MKDRGKAVAVXXXXXXXXXXXXXSELPCKKHPFSSSVGICAYCLKDRLIKLVCSDCGEQR 1201
            MK+RGKAV +             S+LPCKKHP SSSVGICA+CLKDRL+ LVCSDCGEQR
Sbjct: 1    MKERGKAVEMYSNDLFDQDYSTSSDLPCKKHPSSSSVGICAHCLKDRLVNLVCSDCGEQR 60

Query: 1200 LXXXXXXXXXXSYPNSSSVVDIGSVGRISFLIENDKDG------FXXXXXXXXXXXXXXX 1039
            L          +   +S  V++GSVGRISFLIEN+K                        
Sbjct: 61   LSSCSCSEISSN--RNSCTVEVGSVGRISFLIENEKQKNDQVSQSSNITAKPKSSSKDQK 118

Query: 1038 XXXSTVLLKRSSSTSTSVDVKRGSFWKFGRLFRKKRG--VIENNVDGVDEKSEMWDLESM 865
                  +LKRSSS+   +  K G FW+ GRLF KKRG     ++V G +EKS++W ++ M
Sbjct: 119  GDELNFMLKRSSSSCVEIKRKSG-FWRIGRLFSKKRGKGCDRSSVGGFEEKSDVWVVDYM 177

Query: 864  GVSRSRSVCGFRGG--FDDSEGNI-----TLSTGRPSVL----------------KKDGH 754
            GVSR RS+C FRGG  F   +G       ++S  R S+                 +K G 
Sbjct: 178  GVSRCRSLCSFRGGGFFGSEDGTFSGARSSISAARSSISAARNSGVNGGLLFDPDRKSGF 237

Query: 753  ADSEKKKSGGKIDRLFQSEDVFGCVKRDGPSMVSENGSKSIRKGGLIEFDGSFSVDEDPG 574
            +++E +KSG   ++     D  G            +G  + R   L E  G+F+  +D G
Sbjct: 238  SEAEPRKSGFDGEK----RDATGTALEPERLDPGHSGPNTRRVFSLKE--GNFTTVDDSG 291

Query: 573  FIDLKLGLSSESKPEFSCLKNDNFLKSASSFITRDGNLSGDESQSFDYF--------REG 418
            FIDLK    SESK + S +K  +   S S+     G+L G ++ + D +         +G
Sbjct: 292  FIDLKFDFPSESKADLSSVKMVSLSDSHSAL----GSLRGGDAVAQDQYGGHFGSLVGDG 347

Query: 417  MLGNGTSCRITVNNNEIXXXXXXXXXXKWIVKHHSSTAGRPSWQKDEHD 271
            +  +G SCRITV++  I          +WI + H      PS +K + D
Sbjct: 348  LFSHGGSCRITVSDRGIKRSRKSFKSWRWIFRQH------PSAKKKDED 390


>ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|222852170|gb|EEE89717.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  196 bits (498), Expect = 1e-47
 Identities = 145/400 (36%), Positives = 197/400 (49%), Gaps = 42/400 (10%)
 Frame = -1

Query: 1380 MKDRGKAVAVXXXXXXXXXXXXXSELPCKKHPFSSSVGICAYCLKDRLIKLVCSDCGEQR 1201
            MK+RGKAV +             S+LPCKKHP SSSVGICAYCLKDRL+ LVCSDCGEQR
Sbjct: 1    MKERGKAVEMHNNDLFDQDYCTSSDLPCKKHPSSSSVGICAYCLKDRLVNLVCSDCGEQR 60

Query: 1200 LXXXXXXXXXXSYPNSSSVVDIGSVGRISFLIENDKDG------FXXXXXXXXXXXXXXX 1039
            L          +   +S  V++GSVGRISFLIEN+                         
Sbjct: 61   LSSCSCSEISSN--RNSCTVEVGSVGRISFLIENENQKNDQVLHSNSSTANPKSSSGDQK 118

Query: 1038 XXXSTVLLKRSSSTSTSVDVKRGSFWKFGRLFRKKRG--VIENNVDGVDEKSEMWDLESM 865
                  L+KR+SS+   +  K G FW  GRLF KKRG     ++V G++EKS++W ++ M
Sbjct: 119  GDELNFLVKRNSSSCVEIKRKNG-FWGIGRLFSKKRGKGCDRSSVGGLEEKSDLWVVDYM 177

Query: 864  GVSRSRSVCGFRGG--FDDSEGNI-----TLSTGRPSVL----------------KKDGH 754
            GVSR RS+C FRGG  F   +G       ++S  R S+                 +K G 
Sbjct: 178  GVSRCRSLCSFRGGGFFGSEDGTFSGARSSISAARSSISAARNSGVNGGLLFDPDRKSGF 237

Query: 753  ADSEKKKSGGKIDRLFQSEDVFGCVKRDGPSMVSE--------NGSKSIRKGGLIEFDGS 598
            +++E +KSG            F   KRD  S   E        +G+ + R   L E  G+
Sbjct: 238  SEAEPRKSG------------FDGEKRDTTSTALESERLDSGHDGANTRRVFSLKE--GN 283

Query: 597  FSVDEDPGFIDLKLGLSSESKPEFSCLKNDNFLKSASSFITRDGN--LSGDESQSF-DYF 427
            F+  +D GFIDLK     ESK + S +K  +   S S+F +  G   ++ D+   F    
Sbjct: 284  FTTVDDSGFIDLKFDFPPESKADLSAVKMVSSSDSNSAFGSMRGGDVVAQDQYGGFGSLM 343

Query: 426  REGMLGNGTSCRITVNNNEIXXXXXXXXXXKWIVKHHSST 307
             +G   NG+SCRITV++  I          +WI + H S+
Sbjct: 344  GDGPCSNGSSCRITVSDRGIKRSRKSFKSWRWIFRQHPSS 383


>ref|XP_004135128.1| PREDICTED: uncharacterized protein LOC101207638 [Cucumis sativus]
            gi|449493476|ref|XP_004159307.1| PREDICTED:
            uncharacterized protein LOC101225146 [Cucumis sativus]
          Length = 389

 Score =  190 bits (482), Expect = 1e-45
 Identities = 146/404 (36%), Positives = 202/404 (50%), Gaps = 36/404 (8%)
 Frame = -1

Query: 1380 MKDRGKAVAVXXXXXXXXXXXXXSELPCKKHPFSSSVGICAYCLKDRLIKLVCSDCGEQR 1201
            M++RGKA+ V              E PCKKHP SSSVGICA CLKDRLIKLVCSDCGEQR
Sbjct: 1    MRERGKALEVYSNDMDFYSSAS--EFPCKKHPSSSSVGICADCLKDRLIKLVCSDCGEQR 58

Query: 1200 LXXXXXXXXXXSYPNSSSVVDIGSVGRISFLIENDKDGFXXXXXXXXXXXXXXXXXXSTV 1021
            L              +S  V++GSVGR+SFLIEN+++G                     V
Sbjct: 59   LSSCSCSEISS--KRNSCTVEVGSVGRVSFLIENERNG----VSLLGPIKPKIEKREEVV 112

Query: 1020 LLKRSSSTSTSVDVKRGSFWKFGRLFRKKR--GVIENNVDGVDEKSEMWDLESMGVSRSR 847
            LL+RSS  S+ V++K+  FW+ G+ FRKKR  G   ++V G DEKS++  ++ MGVSRSR
Sbjct: 113  LLERSS--SSCVEIKKSGFWRIGKFFRKKREKGCERSSVCGFDEKSDICMVDYMGVSRSR 170

Query: 846  SVCGFRG-GFDDSE--GNITLSTGRPSV----------------LKKDGHADSEKKKSGG 724
            S+C FRG GF  SE  G++ +S GR S+                 ++ G +++E +KSG 
Sbjct: 171  SLCSFRGNGFFGSEDGGDMVVSGGRSSISGARTSSVNGGLVCDSARRSGFSETEPRKSGF 230

Query: 723  KIDRLFQSEDVFGCVKRDGPSMVSENGSKSIRKGGLIEFDGSFSVDEDPGFIDLKLGLSS 544
            + D            +  G      NG     +      +  F+  ++ GFID KL  +S
Sbjct: 231  ESDH-----------RECGNYDSDHNGFSLANRRVFSLKESDFNGMDESGFIDFKLDFTS 279

Query: 543  ESKPEFSCLKND-----NFLKSASSFI--TRDGNLSGDESQSFDY---FREGMLGNGT-- 400
            ESK + S  K         L + +S    TR  +++  E     Y     EG++GNG   
Sbjct: 280  ESKQDISVPKMGFGMGLGLLSNPNSTFGSTRAFDMAAHECSRGLYCGTAGEGIIGNGAGG 339

Query: 399  ---SCRITVNNNEIXXXXXXXXXXKWIVKHHSSTAGRPSWQKDE 277
               SCRITV++  I          KWI KH  +     + +K+E
Sbjct: 340  GGGSCRITVSDRGIKKGRKSLKAWKWIFKHPPNWTNATARKKEE 383


>emb|CBI27124.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  168 bits (425), Expect = 4e-39
 Identities = 111/229 (48%), Positives = 135/229 (58%), Gaps = 11/229 (4%)
 Frame = -1

Query: 1380 MKDRGKAVAVXXXXXXXXXXXXXSELPCKKHPFSSSVGICAYCLKDRLIKLVCSDCGEQR 1201
            MK+RGKAV                +LPC+KHP SSSVGICAYCLKDRLIKLVCSDCGEQR
Sbjct: 1    MKERGKAVETYGGSCFADYYSTS-DLPCRKHPSSSSVGICAYCLKDRLIKLVCSDCGEQR 59

Query: 1200 LXXXXXXXXXXSYPNSSSVVDIGSVGRISFLIENDKDGFXXXXXXXXXXXXXXXXXXSTV 1021
            L          S PNS + V++GSVGRISFLIEN++                       V
Sbjct: 60   L-SSCSCSEISSIPNSCT-VEVGSVGRISFLIENER----GEVSHSNSKLKSEEKSEQVV 113

Query: 1020 LLKRSSSTSTSVDVKRGSFWKFGRLFRKKRGVIENNVDGVDEKSEMWDLESMGVSRSRSV 841
            LLKRSS  S+SV++KR  FW  GRLFRKKR        G D+KSE W  + MGVSRSRS+
Sbjct: 114  LLKRSS--SSSVEIKRSRFWGIGRLFRKKRD------KGFDDKSEGWMFDYMGVSRSRSL 165

Query: 840  CGFR-GGFDDSE-GNITLSTGRPSVL---------KKDGHADSEKKKSG 727
            C FR GG+++SE G++  S  R S +         KK G ++ E ++SG
Sbjct: 166  CSFRGGGYNESEDGDLAHSHARTSGVNGALPFDLDKKSGFSEEEARRSG 214


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