BLASTX nr result

ID: Coptis24_contig00002590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002590
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444496.1| hypothetical protein SORBIDRAFT_07g022850 [S...    97   2e-18
ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [S...    92   4e-17
ref|NP_001057710.2| Os06g0502800 [Oryza sativa Japonica Group] g...    89   5e-16
ref|NP_001050777.2| Os03g0648200 [Oryza sativa Japonica Group] g...    87   1e-15
ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [S...    87   1e-15

>ref|XP_002444496.1| hypothetical protein SORBIDRAFT_07g022850 [Sorghum bicolor]
           gi|241940846|gb|EES13991.1| hypothetical protein
           SORBIDRAFT_07g022850 [Sorghum bicolor]
          Length = 459

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 EGKETWKAFLGIMAKYLE-HHSRPLTFMSDRQKGLIQAVKETFPRAAHRLCFRHMYKNFK 185
           E   TWK FL  +   L   ++ P T M+D+QKGLI AVK+ FP + HR C RH+Y NF+
Sbjct: 292 ESLATWKWFLETLKSDLNIDNTYPWTIMTDKQKGLIPAVKQVFPVSEHRFCVRHLYSNFQ 351

Query: 184 KYFKGAYMELLAWSAAKAYKKTEFERIMKLIEAQDSEAVAWLNREGYESWSRAHYDHETK 5
           + FKG  ++   W+ A++  +  ++R M+ ++A D++A  WL++    +W RA++    K
Sbjct: 352 EKFKGEVLKNQLWTCARSSSEDSWKRNMEKMKALDADAYDWLSKMAPNTWVRAYFSTFPK 411

Query: 4   C 2
           C
Sbjct: 412 C 412


>ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [Sorghum bicolor]
           gi|241940863|gb|EES14008.1| hypothetical protein
           SORBIDRAFT_07g023090 [Sorghum bicolor]
          Length = 861

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
 Frame = -2

Query: 349 TWKAFLGIMAKYLE-HHSRPLTFMSDRQKGLIQAVKETFPRAAHRLCFRHMYKNFKKYFK 173
           TWK FL  +   L+  ++ P T M+D+QKGLI AVK+ FP + HR C RH+Y NF + +K
Sbjct: 398 TWKWFLETLKTDLQIDNTFPWTIMTDKQKGLIPAVKQVFPESEHRFCVRHLYANFNEKYK 457

Query: 172 GAYMELLAWSAAKAYKKTEFERIMKLIEAQDSEAVAWLNREGYESWSRAHYDHETKC 2
           G  ++   W+ A++    ++ R M+ ++A + +A  WL +    +W RA++    KC
Sbjct: 458 GEILKKQLWACARSSSVQQWTRNMEKMKALNEDAYKWLEKMPPNTWVRAYFSEFPKC 514


>ref|NP_001057710.2| Os06g0502800 [Oryza sativa Japonica Group]
           gi|255677079|dbj|BAF19624.2| Os06g0502800 [Oryza sativa
           Japonica Group]
          Length = 658

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 EGKETWKAFLGIMAKYLE-HHSRPLTFMSDRQKGLIQAVKETFPRAAHRLCFRHMYKNFK 185
           E   +W+ FL  + + L   ++ P T M+D+QKGLI AV++ FP + HR C RH+Y NF+
Sbjct: 455 ESLRSWRWFLQTLKEDLGIDNTYPWTIMTDKQKGLIPAVQQIFPDSEHRFCVRHLYSNFQ 514

Query: 184 KYFKGAYMELLAWSAAKAYKKTEFERIMKLIEAQDSEAVAWLNREGYESWSRAHYDHETK 5
            +FKG  ++   W+ A++  + E+   M+ +++ + +A  WL +   ++W RA++    K
Sbjct: 515 VHFKGENLKNQLWACARSSSEVEWNANMEEMKSLNQDAYEWLQKMPPKTWVRAYFSEFPK 574

Query: 4   C 2
           C
Sbjct: 575 C 575


>ref|NP_001050777.2| Os03g0648200 [Oryza sativa Japonica Group]
           gi|255674744|dbj|BAF12691.2| Os03g0648200 [Oryza sativa
           Japonica Group]
          Length = 1015

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
 Frame = -2

Query: 361 EGKETWKAFLGIMAKYLE-HHSRPLTFMSDRQKGLIQAVKETFPRAAHRLCFRHMYKNFK 185
           E   TWK FL  +   L   ++ P T M+D+QKGLI AV++ FP + HR C RH+Y NF+
Sbjct: 535 ESLATWKWFLETLKNDLGIENTYPWTIMTDKQKGLIPAVQQVFPESEHRFCVRHLYSNFQ 594

Query: 184 KYFKGAYMELLAWSAAKAYKKTEFERIMKLIEAQDSEAVAWLNREGYESWSRAHYDHETK 5
             FKG  ++   W+ A++    E+ + M ++   +  A  WL +    +W RA +    K
Sbjct: 595 LQFKGEVLKNQLWACARSSSVQEWNKNMDVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPK 654

Query: 4   C 2
           C
Sbjct: 655 C 655


>ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [Sorghum bicolor]
           gi|241920779|gb|EER93923.1| hypothetical protein
           SORBIDRAFT_01g016800 [Sorghum bicolor]
          Length = 995

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = -2

Query: 349 TWKAFLGIMAKYLE-HHSRPLTFMSDRQKGLIQAVKETFPRAAHRLCFRHMYKNFKKYFK 173
           TWK FL  +   L+  ++ P T M+D+QKGLI  VK+ FP + HR C RH+Y NF + FK
Sbjct: 509 TWKWFLESLKADLQIDNTFPWTIMTDKQKGLIPTVKQVFPESEHRFCVRHLYANFNEKFK 568

Query: 172 GAYMELLAWSAAKAYKKTEFERIMKLIEAQDSEAVAWLNREGYESWSRAHYDHETKC 2
           G  ++   W+ A++    ++ R M+ ++  + +A  W+ +    +W RA++    KC
Sbjct: 569 GEILKKQLWACARSSSVQQWTRNMEKMKDLNVDAYQWIEKMPPNTWLRAYFSEFPKC 625


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