BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002574
         (1705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   682   0.0  
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   643   0.0  
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   637   e-180
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   634   e-179
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi...   627   e-177

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Vitis vinifera]
            gi|297744374|emb|CBI37344.3| unnamed protein product
            [Vitis vinifera]
          Length = 497

 Score =  682 bits (1760), Expect = 0.0
 Identities = 333/427 (77%), Positives = 382/427 (89%)
 Frame = +1

Query: 169  ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 348
            ASKKA+SVILRREATKA+IEKKRGP NSKKLLPRTVLEALHER+TALRWESAL VFELL+
Sbjct: 70   ASKKAISVILRREATKAVIEKKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLR 129

Query: 349  EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 528
            EQLWYRPN G+YIKLIVMLGKCKQPEKA+ LF +MI+EGC+VNHE+YTAL+SAYSRSGLF
Sbjct: 130  EQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLF 189

Query: 529  DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 708
            D+AFSLL++MKNT  C+PDV+TY++LIKSCLQV AFD+V  LLSDMA+Q IKP+TVTYNT
Sbjct: 190  DKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNT 249

Query: 709  LIDAYGRAGRYGEMESTLVEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 888
            LIDAYG+A R+ EMESTL+EMLR+ +CEPDVWTMN+TLRAFG SGQIETME CYEKFQ++
Sbjct: 250  LIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSA 309

Query: 889  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 1068
            GI P+IKTFNILLDSYGKA  Y+KMSAVMEYMQKY+FSWTIVTYNVVIDAFGRAGDLKQM
Sbjct: 310  GIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQM 369

Query: 1069 EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 1248
            EYLFRLMR+E+IKP+C+TL SLV+AYGRAG AEKIG VLRFIENSDV LD  FFNCL+DA
Sbjct: 370  EYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDA 429

Query: 1249 YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISKGKRTQE 1428
            YGR+GC AEMK   EMM ++GCK D+ITY TMIKAY   G+TS AKEL+ ++     T+ 
Sbjct: 430  YGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPDETRL 489

Query: 1429 KLG*LDF 1449
            ++G  DF
Sbjct: 490  EMGKPDF 496


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  643 bits (1658), Expect = 0.0
 Identities = 310/417 (74%), Positives = 365/417 (87%)
 Frame = +1

Query: 169  ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 348
            AS+KA+SVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHER+TALRWESAL VFELL+
Sbjct: 87   ASRKAISVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKVFELLR 146

Query: 349  EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 528
            EQ+WYRP  G+YIKLIVMLGKCKQPEKA++LF++MI EGC V+HESYTAL+SAY RSGL 
Sbjct: 147  EQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLL 206

Query: 529  DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 708
            D+AFSLL++MK    C+PDV+TY+ILIKSC+QVFAFD+ +TLLS+M    I P+T+TYNT
Sbjct: 207  DKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNT 266

Query: 709  LIDAYGRAGRYGEMESTLVEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 888
            LIDAYG+A  + EME+TLV+ML Q+ CEPDVWTMN+TLRAFG SGQIETME CYEKFQ +
Sbjct: 267  LIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGA 326

Query: 889  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 1068
            GI P I TFN+LLDSYGKAG Y+KMSAVMEYMQKY++SWTI+TYN+VIDAFGRAGDLKQM
Sbjct: 327  GIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQM 386

Query: 1069 EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 1248
            EYLFRLMR+E+IKP+C+TL SLV+AYG+A   EKI  VLRFIENSD+TLDT FFNCL+DA
Sbjct: 387  EYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDA 446

Query: 1249 YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISKGKR 1419
            YGRMGC AEMK    +M ++G + D+ITY TMIKAY+S G+T   KEL+D+ + G R
Sbjct: 447  YGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDLEAAGVR 503


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  637 bits (1644), Expect = e-180
 Identities = 311/433 (71%), Positives = 370/433 (85%), Gaps = 6/433 (1%)
 Frame = +1

Query: 169  ASKKAVSVILRREATKAIIEK------KRGPTNSKKLLPRTVLEALHERVTALRWESALM 330
            AS+KAVSVIL REATKA+I+K      K+GP NSKKLLPRTVLEALHERVTALRWESAL 
Sbjct: 83   ASQKAVSVILWREATKAMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWESALK 142

Query: 331  VFELLQEQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAY 510
            VFELL EQ+WY+P+ GVYIKLIVMLGKCKQPEKA++LF++M++EGC+++ ESYTAL+SAY
Sbjct: 143  VFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAY 202

Query: 511  SRSGLFDRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPS 690
            SRSGL D+AFSLL++MKNT GC+PDV TY+IL+KSCLQVFAFD++Q+LLSDM ++ IKP+
Sbjct: 203  SRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKPN 262

Query: 691  TVTYNTLIDAYGRAGRYGEMESTLVEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCY 870
            TVTYNTLIDAYG+A ++ EMES LVEML  R C+PDVWTMN+TLRAFG  GQIETME CY
Sbjct: 263  TVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCY 322

Query: 871  EKFQNSGIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRA 1050
            EKFQN+GI+P+++TFNILLDSYGKA  Y+KMSAVMEYMQKY++SWTIVT+N+VIDAFG+A
Sbjct: 323  EKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKA 382

Query: 1051 GDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFF 1230
            GDLKQMEYLFRLMR+E+IKP+C+TL SLV+AY RAG  EKI  VLRF+ENSDV LDT FF
Sbjct: 383  GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFF 442

Query: 1231 NCLLDAYGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISK 1410
            NCL+DAY R+GCLAEMK   EMM + GCK D +TY TMIK Y   G+ S AKEL +++  
Sbjct: 443  NCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLPT 502

Query: 1411 GKRTQEKLG*LDF 1449
              R   K    DF
Sbjct: 503  VNRPPLKRDKPDF 515


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  634 bits (1636), Expect = e-179
 Identities = 307/419 (73%), Positives = 365/419 (87%)
 Frame = +1

Query: 169  ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 348
            AS+KA+SVILRREATKA+IEKKRGPTNSKKLLP+TVLEALHER+TALRW SAL VFELL+
Sbjct: 72   ASQKAISVILRREATKAVIEKKRGPTNSKKLLPQTVLEALHERITALRWASALEVFELLR 131

Query: 349  EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 528
            EQLWYRP  G+Y+KLIVMLGKCKQP+KA+ LF++MI+EGC V HESYTAL+SAY RSGLF
Sbjct: 132  EQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLF 191

Query: 529  DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 708
            D+AFS++++MKNT  C PDV+TY+ILIKSCLQVFAFD+VQ LLSDM    I+P+TVT+  
Sbjct: 192  DKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTF-- 249

Query: 709  LIDAYGRAGRYGEMESTLVEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 888
                        EME+TL+EML Q++CEPDVWTMN+T+RAFGGSGQ+E MENCYEKFQ++
Sbjct: 250  -----------AEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSA 298

Query: 889  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 1068
            GI P+IKTFNILLDSYGKAG+YQKMSAVMEYMQ+Y++SWTIVTYNVVIDAFGRAGDLKQM
Sbjct: 299  GIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQM 358

Query: 1069 EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 1248
            EYLFRLMR+E+IKP+C+TL SLV+AY  AG  EKIGSVLRFIENSDVTLDT FFNCL+DA
Sbjct: 359  EYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDA 418

Query: 1249 YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISKGKRTQ 1425
            YGR+ C AEMKE  E+M E+GCK D++TY TMIKAY+  G+TS AK+L +++   + T+
Sbjct: 419  YGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSVEVTR 477


>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  627 bits (1616), Expect = e-177
 Identities = 302/425 (71%), Positives = 365/425 (85%), Gaps = 3/425 (0%)
 Frame = +1

Query: 169  ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 348
            AS+KA+SVILRREATKA+IE+KRGP NSKKLLPRTVLEALH+R+T LRWESAL VFELL+
Sbjct: 87   ASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKVFELLR 146

Query: 349  EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 528
            EQLWYRP  G+YIKLIVMLGKCKQ EKA +LF+ MIEEGC V+HESYTAL+SAYSRSGL 
Sbjct: 147  EQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLL 206

Query: 529  DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 708
            D AFS+L++MKN+  C+PDV+TY+ILIKSCLQVFAF++ QTLLSDM  + IKP+T+TYNT
Sbjct: 207  DEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNT 266

Query: 709  LIDAYGRAGRYGEMESTLVEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 888
             IDAYG+A  + EMES LV+ML    C+PDVWTMN+TLRAFG SGQ+ETME CYEKFQ +
Sbjct: 267  FIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEA 326

Query: 889  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 1068
            GI+P I+TFNILLDSYGKA SY+KMSAVMEYMQKY++SWTIVTYN+VIDAFGRAG+LKQM
Sbjct: 327  GIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQM 386

Query: 1069 EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 1248
            E+LFRLMR+E+IKP+C+TL SLV+AYG+AG  EKI SVL  +ENSD+ LDT F+NCL+DA
Sbjct: 387  EHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDA 446

Query: 1249 YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMIS---KGKR 1419
            YGR+ C AEMK+   MM +RGCK D+ TY TM +AY+  G+ + AKE++++I+     KR
Sbjct: 447  YGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPSKR 506

Query: 1420 TQEKL 1434
            T+  L
Sbjct: 507  TRPDL 511