BLASTX nr result
ID: Coptis24_contig00002570
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002570
(2073 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsil... 936 0.0
ref|XP_002283538.1| PREDICTED: T-complex protein 1 subunit epsil... 930 0.0
ref|XP_002285352.1| PREDICTED: T-complex protein 1 subunit epsil... 930 0.0
prf||2206327A T complex protein 930 0.0
ref|XP_003538584.1| PREDICTED: T-complex protein 1 subunit epsil... 926 0.0
>ref|XP_004171246.1| PREDICTED: T-complex protein 1 subunit epsilon-like [Cucumis sativus]
Length = 535
Score = 936 bits (2418), Expect = 0.0
Identities = 471/535 (88%), Positives = 499/535 (93%)
Frame = +2
Query: 107 MALAFDEYGRPFIIVRDQEQKTRLRGIDAQKAHISAGKAVARILRTSLGPKGMDKMLQSP 286
MALAFDEYGRPFII+++QEQKTRLRG+DAQKA+I++GKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60
Query: 287 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMXXXXXXXXXXXX 466
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVM
Sbjct: 61 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
Query: 467 XXXVHPIRVAEGYEMASRISVEHLENIAQKFVFDATNIEPLVQTCMTTLSSKIVNRCKRP 646
+HPIRVAEGYE+ASRI+V+HLE+IAQKF F N+EPL+QTCMTTLSSKIVNRCKR
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGEKNLEPLIQTCMTTLSSKIVNRCKRS 180
Query: 647 LAEIXXXXXXXXXDLERRDVNLDLIKVEGKVGGKLEDTELINGIIVDKDMSHPQMPKQIR 826
LAEI DLERRDVNLDLIKVEGKVGGKLEDTEL+ GIIVDKDMSHPQMPKQI
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
Query: 827 NAKIAILTCPFEPPKPKTKHKVDIDSVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 1006
+AKIAILTCPFEPPKPKTKHKVDID+VEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
Query: 1007 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTAEKLGKAGLVREKSF 1186
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT+EKLGKAGLVREKSF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360
Query: 1187 GTTKERMLYIEECANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 1366
GTTK+RMLYIE CANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420
Query: 1367 AEIACSIAVEAAADRYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 1546
AEI+CS+AVE AAD+YPGVEQYAIRAFADALD++PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 480
Query: 1547 NNSYFGIDCNDVGTNDMCKQNVFETLIGKQQQILLATQVVKMILKIDDIISPSDF 1711
NN Y GIDCND+GTNDM +QNVFETLIGKQQQILLATQVVKMILKIDD+ISPSD+
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY 535
>ref|XP_002283538.1| PREDICTED: T-complex protein 1 subunit epsilon [Vitis vinifera]
gi|302143543|emb|CBI22104.3| unnamed protein product
[Vitis vinifera]
Length = 535
Score = 930 bits (2404), Expect = 0.0
Identities = 471/535 (88%), Positives = 497/535 (92%)
Frame = +2
Query: 107 MALAFDEYGRPFIIVRDQEQKTRLRGIDAQKAHISAGKAVARILRTSLGPKGMDKMLQSP 286
MALAFDE+GRPFII+R QEQK+RLRG+DAQKA+ISAGKAVARILRTSLGPKGMDK+LQSP
Sbjct: 1 MALAFDEFGRPFIILRGQEQKSRLRGLDAQKANISAGKAVARILRTSLGPKGMDKILQSP 60
Query: 287 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMXXXXXXXXXXXX 466
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVV+
Sbjct: 61 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVLAGALLEQAEGLL 120
Query: 467 XXXVHPIRVAEGYEMASRISVEHLENIAQKFVFDATNIEPLVQTCMTTLSSKIVNRCKRP 646
+HPIRVAEGYEMA RI+VEHLE+IAQKF F TNIEPLVQTCMTTLSSKIVNRCKR
Sbjct: 121 ERGIHPIRVAEGYEMACRIAVEHLEHIAQKFEFGVTNIEPLVQTCMTTLSSKIVNRCKRS 180
Query: 647 LAEIXXXXXXXXXDLERRDVNLDLIKVEGKVGGKLEDTELINGIIVDKDMSHPQMPKQIR 826
LAEI DLERRDVNLDLIKVEGKVGGKLEDTELI+GI+VDKDMSHPQMPK I
Sbjct: 181 LAEIAVKAVMAVADLERRDVNLDLIKVEGKVGGKLEDTELIHGIVVDKDMSHPQMPKHIE 240
Query: 827 NAKIAILTCPFEPPKPKTKHKVDIDSVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 1006
+AKIAILTCPFEPPKPKTKHKVDID+VEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
Query: 1007 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTAEKLGKAGLVREKSF 1186
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAGLVREKSF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSF 360
Query: 1187 GTTKERMLYIEECANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 1366
GTTK+RMLYIE CANSRAVTIF+RGGNKM+IEETKRSIHDALCVARN+IRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIERCANSRAVTIFVRGGNKMIIEETKRSIHDALCVARNIIRNNSIVYGGGS 420
Query: 1367 AEIACSIAVEAAADRYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 1546
AEI+CSIAVEAAAD+YPGVEQYAIRAF DALDSIPMALAENSGLQPIETLSAVKSQQIK+
Sbjct: 421 AEISCSIAVEAAADKYPGVEQYAIRAFGDALDSIPMALAENSGLQPIETLSAVKSQQIKD 480
Query: 1547 NNSYFGIDCNDVGTNDMCKQNVFETLIGKQQQILLATQVVKMILKIDDIISPSDF 1711
NN+Y GIDCNDVGT DM +QNVFETLIGKQQQILLATQVVKMILKIDD+ISP+D+
Sbjct: 481 NNAYCGIDCNDVGTYDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPTDY 535
>ref|XP_002285352.1| PREDICTED: T-complex protein 1 subunit epsilon [Vitis vinifera]
Length = 535
Score = 930 bits (2404), Expect = 0.0
Identities = 472/535 (88%), Positives = 498/535 (93%)
Frame = +2
Query: 107 MALAFDEYGRPFIIVRDQEQKTRLRGIDAQKAHISAGKAVARILRTSLGPKGMDKMLQSP 286
MALAFDE+GRPFII+++QEQK+RLRG+DAQKA+ISAGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKANISAGKAVARILRTSLGPKGMDKMLQSP 60
Query: 287 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMXXXXXXXXXXXX 466
DGDVTITNDGATILEQMDVDNQIAKL+VELSRSQDYEIGDGTTGVVVM
Sbjct: 61 DGDVTITNDGATILEQMDVDNQIAKLVVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
Query: 467 XXXVHPIRVAEGYEMASRISVEHLENIAQKFVFDATNIEPLVQTCMTTLSSKIVNRCKRP 646
+HPIR++EGYEMASRI+VEHLE+IAQKF F TNIEPLVQTCMTTLSSKIVNRCKR
Sbjct: 121 ERGIHPIRISEGYEMASRIAVEHLEHIAQKFDFGVTNIEPLVQTCMTTLSSKIVNRCKRS 180
Query: 647 LAEIXXXXXXXXXDLERRDVNLDLIKVEGKVGGKLEDTELINGIIVDKDMSHPQMPKQIR 826
LAEI DLER+DVNLDLIKVEGKVGGKLEDTELI GI+VDKDMSHPQMPKQI
Sbjct: 181 LAEIAVKAVMSVADLERKDVNLDLIKVEGKVGGKLEDTELIYGILVDKDMSHPQMPKQIE 240
Query: 827 NAKIAILTCPFEPPKPKTKHKVDIDSVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 1006
+AKIAILTCPFEPPKPKTKHKVDID+VEKFQTLR QEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQW 300
Query: 1007 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTAEKLGKAGLVREKSF 1186
GFDDEANHLL+HRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAGLVREKSF
Sbjct: 301 GFDDEANHLLLHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTQEKLGKAGLVREKSF 360
Query: 1187 GTTKERMLYIEECANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 1366
GTTK+RMLYIE CANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIR+NSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRSNSIVYGGGS 420
Query: 1367 AEIACSIAVEAAADRYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 1546
AEI+CSIAVEAAADRYPGVEQYAIRAF DALDSIPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSIAVEAAADRYPGVEQYAIRAFGDALDSIPMALAENSGLQPIETLSAVKSQQIKE 480
Query: 1547 NNSYFGIDCNDVGTNDMCKQNVFETLIGKQQQILLATQVVKMILKIDDIISPSDF 1711
+N Y GIDCNDVGTNDM +QNVFETLIGKQQQILLATQVVKMILKIDD+ISPS++
Sbjct: 481 DNPYCGIDCNDVGTNDMQEQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 535
>prf||2206327A T complex protein
Length = 534
Score = 930 bits (2404), Expect = 0.0
Identities = 471/535 (88%), Positives = 498/535 (93%)
Frame = +2
Query: 107 MALAFDEYGRPFIIVRDQEQKTRLRGIDAQKAHISAGKAVARILRTSLGPKGMDKMLQSP 286
MALAFDEYGRPFII+++QEQKTRLRG+DAQKA+I++GKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60
Query: 287 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMXXXXXXXXXXXX 466
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVM
Sbjct: 61 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120
Query: 467 XXXVHPIRVAEGYEMASRISVEHLENIAQKFVFDATNIEPLVQTCMTTLSSKIVNRCKRP 646
+HPIRVAEGYE+ASRI+V+HLE+IAQKF F NIEPL+QTCMTTLSSKIVNRCKR
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGEKNIEPLIQTCMTTLSSKIVNRCKRS 180
Query: 647 LAEIXXXXXXXXXDLERRDVNLDLIKVEGKVGGKLEDTELINGIIVDKDMSHPQMPKQIR 826
LAEI DLERRDVNLDLIKVEGKVGGKLEDTEL+ GIIVDKDMSHPQMPKQI
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240
Query: 827 NAKIAILTCPFEPPKPKTKHKVDIDSVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 1006
+AKIAILTCPFEPPKPKTKHKVDID+VEKFQTLRLQEQKYFDDMVQKCKDVGATL ICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATL-ICQW 299
Query: 1007 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTAEKLGKAGLVREKSF 1186
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT+EKLGKAGLVREKSF
Sbjct: 300 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 359
Query: 1187 GTTKERMLYIEECANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 1366
GTTK+RMLYIE CANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 360 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 419
Query: 1367 AEIACSIAVEAAADRYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 1546
AEI+CS+AVE AAD+YPGVEQYAIRAFADALD++PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 420 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 479
Query: 1547 NNSYFGIDCNDVGTNDMCKQNVFETLIGKQQQILLATQVVKMILKIDDIISPSDF 1711
NN Y GIDCND+GTNDM +QNVFETLIGKQQQILLATQVVKMILKIDD+ISPSD+
Sbjct: 480 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY 534
>ref|XP_003538584.1| PREDICTED: T-complex protein 1 subunit epsilon-like [Glycine max]
Length = 535
Score = 926 bits (2394), Expect = 0.0
Identities = 464/535 (86%), Positives = 498/535 (93%)
Frame = +2
Query: 107 MALAFDEYGRPFIIVRDQEQKTRLRGIDAQKAHISAGKAVARILRTSLGPKGMDKMLQSP 286
MALAFDE+GRPFII+++QEQK+RLRG+DAQKA+ISAGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1 MALAFDEFGRPFIILKEQEQKSRLRGLDAQKANISAGKAVARILRTSLGPKGMDKMLQSP 60
Query: 287 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMXXXXXXXXXXXX 466
DGDVTITNDGATIL+QMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVM
Sbjct: 61 DGDVTITNDGATILDQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEKAERLL 120
Query: 467 XXXVHPIRVAEGYEMASRISVEHLENIAQKFVFDATNIEPLVQTCMTTLSSKIVNRCKRP 646
+HPIR+AEGYEMASRI+VEHLE +A KF FD +N+EPL+QTCMTTLSSKIVNRCKR
Sbjct: 121 ERGIHPIRIAEGYEMASRIAVEHLERVANKFEFDESNLEPLIQTCMTTLSSKIVNRCKRS 180
Query: 647 LAEIXXXXXXXXXDLERRDVNLDLIKVEGKVGGKLEDTELINGIIVDKDMSHPQMPKQIR 826
LAEI DL R+DVNLDLIKVEGKVGGKLEDTELI GI+VDKDMSHPQMPKQI
Sbjct: 181 LAEIAVKAVLAVADLARKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKQIE 240
Query: 827 NAKIAILTCPFEPPKPKTKHKVDIDSVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 1006
+AKIAILTCPFEPPKPKTKHKVDID+VEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300
Query: 1007 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTAEKLGKAGLVREKSF 1186
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQEL+ EKLGKAG+VREKSF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGMVREKSF 360
Query: 1187 GTTKERMLYIEECANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 1366
GTTK+RMLYIE CANSRAVTIFIRGGNKM+IEETKRS+HDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMIIEETKRSLHDALCVARNLIRNNSIVYGGGS 420
Query: 1367 AEIACSIAVEAAADRYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 1546
AEI+CSIAVEAAADRYPGVEQYAIRAF DAL++IPMALAENSGLQPIETLSAVKSQQIK+
Sbjct: 421 AEISCSIAVEAAADRYPGVEQYAIRAFGDALEAIPMALAENSGLQPIETLSAVKSQQIKD 480
Query: 1547 NNSYFGIDCNDVGTNDMCKQNVFETLIGKQQQILLATQVVKMILKIDDIISPSDF 1711
NN +FGIDCNDVGTNDM +QNVFETLIGKQQQ+LLATQVVKMILKIDD+ISPS++
Sbjct: 481 NNPHFGIDCNDVGTNDMREQNVFETLIGKQQQLLLATQVVKMILKIDDVISPSEY 535