BLASTX nr result
ID: Coptis24_contig00002567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002567
(404 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera] 129 2e-41
ref|XP_002279471.2| PREDICTED: ABC transporter B family member 1... 129 2e-41
ref|XP_003549468.1| PREDICTED: ABC transporter B family member 1... 119 4e-39
ref|XP_003544389.1| PREDICTED: ABC transporter B family member 1... 119 4e-39
ref|XP_004136487.1| PREDICTED: ABC transporter B family member 1... 118 2e-37
>emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]
Length = 1344
Score = 129 bits (323), Expect(2) = 2e-41
Identities = 69/90 (76%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 2 IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
IVQN+ALTV AF+IAFTLSW IASV+IA+FPLLIGASITEQLFL+GFGGDYT+AY++AT+
Sbjct: 899 IVQNVALTVTAFVIAFTLSWRIASVIIASFPLLIGASITEQLFLKGFGGDYTRAYAQATA 958
Query: 182 VAREAITNIRTVAAFGL--RHALYPSSPLN 265
VAREAI NIRTVAAFG R +L +S LN
Sbjct: 959 VAREAIANIRTVAAFGAEDRISLQFASELN 988
Score = 65.5 bits (158), Expect(2) = 2e-41
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +3
Query: 282 TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
+G GYG SQL CSYAL LWYAS++IK SNFGDIIKSF
Sbjct: 1001 SGFGYGVSQLFAFCSYALGLWYASVLIKHNDSNFGDIIKSF 1041
>ref|XP_002279471.2| PREDICTED: ABC transporter B family member 13-like [Vitis vinifera]
Length = 1254
Score = 129 bits (323), Expect(2) = 2e-41
Identities = 69/90 (76%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 2 IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
IVQN+ALTV AF+IAFTLSW IASV+IA+FPLLIGASITEQLFL+GFGGDYT+AY++AT+
Sbjct: 809 IVQNVALTVTAFVIAFTLSWRIASVIIASFPLLIGASITEQLFLKGFGGDYTRAYAQATA 868
Query: 182 VAREAITNIRTVAAFGL--RHALYPSSPLN 265
VAREAI NIRTVAAFG R +L +S LN
Sbjct: 869 VAREAIANIRTVAAFGAEDRISLQFASELN 898
Score = 65.5 bits (158), Expect(2) = 2e-41
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +3
Query: 282 TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
+G GYG SQL CSYAL LWYAS++IK SNFGDIIKSF
Sbjct: 911 SGFGYGVSQLFAFCSYALGLWYASVLIKHNDSNFGDIIKSF 951
>ref|XP_003549468.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
Length = 1250
Score = 119 bits (299), Expect(2) = 4e-39
Identities = 60/76 (78%), Positives = 67/76 (88%)
Frame = +2
Query: 2 IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
IVQN+ALTV AF+I FTLSW + +VV+A PLLIGASITEQLFL+GFGGDY AYSRATS
Sbjct: 804 IVQNVALTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYGHAYSRATS 863
Query: 182 VAREAITNIRTVAAFG 229
+AREAI NIRTVAAFG
Sbjct: 864 LAREAIANIRTVAAFG 879
Score = 67.0 bits (162), Expect(2) = 4e-39
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3
Query: 282 TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
+G GYG +QLL CSYAL LWYAS++IKK SNFGDI+KSF
Sbjct: 906 SGFGYGITQLLAFCSYALGLWYASVLIKKNESNFGDIMKSF 946
Score = 40.8 bits (94), Expect(2) = 1e-06
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 5 VQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATSV 184
++ L+ ++ F I FT W + + +A PL+ A + + AY+ A V
Sbjct: 172 IRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAEAGKV 231
Query: 185 AREAITNIRTVAAF 226
A+E I+ +RTV +F
Sbjct: 232 AQEVISQVRTVYSF 245
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 285 GIGYGASQLLGLCSYALSLWYASIIIKKQYSNFG 386
GIG G + L C++AL LWYASI+++ +N G
Sbjct: 274 GIGVGFTYGLLFCAWALLLWYASILVRNHKTNGG 307
>ref|XP_003544389.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
Length = 1250
Score = 119 bits (299), Expect(2) = 4e-39
Identities = 60/76 (78%), Positives = 67/76 (88%)
Frame = +2
Query: 2 IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
IVQN+ALTV AF+I FTLSW + +VV+A PLLIGASITEQLFL+GFGGDY AYSRATS
Sbjct: 804 IVQNVALTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYGHAYSRATS 863
Query: 182 VAREAITNIRTVAAFG 229
+AREAI NIRTVAAFG
Sbjct: 864 LAREAIANIRTVAAFG 879
Score = 67.0 bits (162), Expect(2) = 4e-39
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +3
Query: 282 TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
+G GYG +QLL CSYAL LWYAS++IKK SNFGDI+KSF
Sbjct: 906 SGFGYGITQLLAFCSYALGLWYASVLIKKNESNFGDIMKSF 946
Score = 40.4 bits (93), Expect(2) = 3e-06
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 5 VQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATSV 184
++ L+ ++ F I FT W + + +A PL+ A + + AY+ A V
Sbjct: 172 IRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAEAGKV 231
Query: 185 AREAITNIRTVAAF 226
A E I+ +RTV +F
Sbjct: 232 AEEVISQVRTVYSF 245
Score = 35.4 bits (80), Expect(2) = 3e-06
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 285 GIGYGASQLLGLCSYALSLWYASIIIKKQYSNFG 386
G+G G + L C++AL LWYASI+++ +N G
Sbjct: 274 GVGVGFTYGLLFCAWALLLWYASILVRHHKTNGG 307
>ref|XP_004136487.1| PREDICTED: ABC transporter B family member 13-like [Cucumis sativus]
Length = 1281
Score = 118 bits (295), Expect(2) = 2e-37
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = +2
Query: 2 IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
IVQN+ALTV AF+IAF SW +A+VV+A+ PLLIGASITEQLFL+GFGGDY QAY+RAT+
Sbjct: 835 IVQNVALTVSAFVIAFIFSWRLAAVVVASLPLLIGASITEQLFLKGFGGDYGQAYNRATA 894
Query: 182 VAREAITNIRTVAAFG 229
VA EAI NIRTVAAFG
Sbjct: 895 VAHEAIANIRTVAAFG 910
Score = 62.8 bits (151), Expect(2) = 2e-37
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +3
Query: 285 GIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
G GYG SQ CSYAL LWYAS +IK ++SNFGDI+KSF
Sbjct: 938 GFGYGISQFFAFCSYALGLWYASTLIKHRHSNFGDIMKSF 977