BLASTX nr result

ID: Coptis24_contig00002567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002567
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]   129   2e-41
ref|XP_002279471.2| PREDICTED: ABC transporter B family member 1...   129   2e-41
ref|XP_003549468.1| PREDICTED: ABC transporter B family member 1...   119   4e-39
ref|XP_003544389.1| PREDICTED: ABC transporter B family member 1...   119   4e-39
ref|XP_004136487.1| PREDICTED: ABC transporter B family member 1...   118   2e-37

>emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]
          Length = 1344

 Score =  129 bits (323), Expect(2) = 2e-41
 Identities = 69/90 (76%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2    IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
            IVQN+ALTV AF+IAFTLSW IASV+IA+FPLLIGASITEQLFL+GFGGDYT+AY++AT+
Sbjct: 899  IVQNVALTVTAFVIAFTLSWRIASVIIASFPLLIGASITEQLFLKGFGGDYTRAYAQATA 958

Query: 182  VAREAITNIRTVAAFGL--RHALYPSSPLN 265
            VAREAI NIRTVAAFG   R +L  +S LN
Sbjct: 959  VAREAIANIRTVAAFGAEDRISLQFASELN 988



 Score = 65.5 bits (158), Expect(2) = 2e-41
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 282  TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
            +G GYG SQL   CSYAL LWYAS++IK   SNFGDIIKSF
Sbjct: 1001 SGFGYGVSQLFAFCSYALGLWYASVLIKHNDSNFGDIIKSF 1041


>ref|XP_002279471.2| PREDICTED: ABC transporter B family member 13-like [Vitis vinifera]
          Length = 1254

 Score =  129 bits (323), Expect(2) = 2e-41
 Identities = 69/90 (76%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
 Frame = +2

Query: 2    IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
            IVQN+ALTV AF+IAFTLSW IASV+IA+FPLLIGASITEQLFL+GFGGDYT+AY++AT+
Sbjct: 809  IVQNVALTVTAFVIAFTLSWRIASVIIASFPLLIGASITEQLFLKGFGGDYTRAYAQATA 868

Query: 182  VAREAITNIRTVAAFGL--RHALYPSSPLN 265
            VAREAI NIRTVAAFG   R +L  +S LN
Sbjct: 869  VAREAIANIRTVAAFGAEDRISLQFASELN 898



 Score = 65.5 bits (158), Expect(2) = 2e-41
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +3

Query: 282  TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
            +G GYG SQL   CSYAL LWYAS++IK   SNFGDIIKSF
Sbjct: 911  SGFGYGVSQLFAFCSYALGLWYASVLIKHNDSNFGDIIKSF 951


>ref|XP_003549468.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
          Length = 1250

 Score =  119 bits (299), Expect(2) = 4e-39
 Identities = 60/76 (78%), Positives = 67/76 (88%)
 Frame = +2

Query: 2    IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
            IVQN+ALTV AF+I FTLSW + +VV+A  PLLIGASITEQLFL+GFGGDY  AYSRATS
Sbjct: 804  IVQNVALTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYGHAYSRATS 863

Query: 182  VAREAITNIRTVAAFG 229
            +AREAI NIRTVAAFG
Sbjct: 864  LAREAIANIRTVAAFG 879



 Score = 67.0 bits (162), Expect(2) = 4e-39
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +3

Query: 282  TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
            +G GYG +QLL  CSYAL LWYAS++IKK  SNFGDI+KSF
Sbjct: 906  SGFGYGITQLLAFCSYALGLWYASVLIKKNESNFGDIMKSF 946



 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 21/74 (28%), Positives = 37/74 (50%)
 Frame = +2

Query: 5   VQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATSV 184
           ++ L+  ++ F I FT  W +  + +A  PL+  A     + +         AY+ A  V
Sbjct: 172 IRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAEAGKV 231

Query: 185 AREAITNIRTVAAF 226
           A+E I+ +RTV +F
Sbjct: 232 AQEVISQVRTVYSF 245



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 285 GIGYGASQLLGLCSYALSLWYASIIIKKQYSNFG 386
           GIG G +  L  C++AL LWYASI+++   +N G
Sbjct: 274 GIGVGFTYGLLFCAWALLLWYASILVRNHKTNGG 307


>ref|XP_003544389.1| PREDICTED: ABC transporter B family member 13-like [Glycine max]
          Length = 1250

 Score =  119 bits (299), Expect(2) = 4e-39
 Identities = 60/76 (78%), Positives = 67/76 (88%)
 Frame = +2

Query: 2    IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
            IVQN+ALTV AF+I FTLSW + +VV+A  PLLIGASITEQLFL+GFGGDY  AYSRATS
Sbjct: 804  IVQNVALTVTAFVIGFTLSWKLTAVVVACLPLLIGASITEQLFLKGFGGDYGHAYSRATS 863

Query: 182  VAREAITNIRTVAAFG 229
            +AREAI NIRTVAAFG
Sbjct: 864  LAREAIANIRTVAAFG 879



 Score = 67.0 bits (162), Expect(2) = 4e-39
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +3

Query: 282  TGIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
            +G GYG +QLL  CSYAL LWYAS++IKK  SNFGDI+KSF
Sbjct: 906  SGFGYGITQLLAFCSYALGLWYASVLIKKNESNFGDIMKSF 946



 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +2

Query: 5   VQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATSV 184
           ++ L+  ++ F I FT  W +  + +A  PL+  A     + +         AY+ A  V
Sbjct: 172 IRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAEAGKV 231

Query: 185 AREAITNIRTVAAF 226
           A E I+ +RTV +F
Sbjct: 232 AEEVISQVRTVYSF 245



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +3

Query: 285 GIGYGASQLLGLCSYALSLWYASIIIKKQYSNFG 386
           G+G G +  L  C++AL LWYASI+++   +N G
Sbjct: 274 GVGVGFTYGLLFCAWALLLWYASILVRHHKTNGG 307


>ref|XP_004136487.1| PREDICTED: ABC transporter B family member 13-like [Cucumis sativus]
          Length = 1281

 Score =  118 bits (295), Expect(2) = 2e-37
 Identities = 59/76 (77%), Positives = 68/76 (89%)
 Frame = +2

Query: 2    IVQNLALTVIAFIIAFTLSWCIASVVIATFPLLIGASITEQLFLQGFGGDYTQAYSRATS 181
            IVQN+ALTV AF+IAF  SW +A+VV+A+ PLLIGASITEQLFL+GFGGDY QAY+RAT+
Sbjct: 835  IVQNVALTVSAFVIAFIFSWRLAAVVVASLPLLIGASITEQLFLKGFGGDYGQAYNRATA 894

Query: 182  VAREAITNIRTVAAFG 229
            VA EAI NIRTVAAFG
Sbjct: 895  VAHEAIANIRTVAAFG 910



 Score = 62.8 bits (151), Expect(2) = 2e-37
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +3

Query: 285  GIGYGASQLLGLCSYALSLWYASIIIKKQYSNFGDIIKSF 404
            G GYG SQ    CSYAL LWYAS +IK ++SNFGDI+KSF
Sbjct: 938  GFGYGISQFFAFCSYALGLWYASTLIKHRHSNFGDIMKSF 977


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