BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002556
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]   154   2e-35
ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis ...   151   2e-34
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   143   5e-32
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...   140   4e-31
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   139   8e-31

>emb|CAN66619.1| hypothetical protein VITISV_028369 [Vitis vinifera]
          Length = 986

 Score =  154 bits (390), Expect = 2e-35
 Identities = 107/352 (30%), Positives = 177/352 (50%), Gaps = 40/352 (11%)
 Frame = -2

Query: 950  SELPRDILTKIAEDCIETHLQTIQFRAVCNSWRSSV----PLPTPSLASPVVLPLTQLLN 783
            S LP+D+L KIA   ++T +  ++FR VC+SW SSV    P   P L+  +  P+  + N
Sbjct: 399  SHLPKDLLAKIAGR-LDTXIDFLRFRGVCSSWMSSVSPTFPSKNPLLSLKIPYPIDSIAN 457

Query: 782  YKTGFCE---------LLENTIYTIRPKQLQPESCSKLLLVQVDVHAKPRNVINIIDPLS 630
                  +         L+E+T+Y ++P +  P+S   LL+   +   KP  V  ++D LS
Sbjct: 458  LNISDPDTPNPRVSFSLIESTLYYLQPLRQTPDSKEALLVKLXE--PKPGKV-RLMDTLS 514

Query: 629  NIVIKPIPRQFPRGLNLLDYKICGFYKEYYLVTIDSN---------ENCNVRKVTLSSSG 477
               IK +P+ FP+ LN LD+++    K Y L   D           ++  + K+ + S G
Sbjct: 515  RRAIKHLPKNFPKVLNTLDFRVREVGKTYGLRFFDVRGKPJTRFEFKSILITKLIMFSKG 574

Query: 476  SINHLVVMGFDSLNKLVCFRSGDERWMVLDD-KERCRFKDVILYKGQFYAVDSTRRVCTF 300
                L+++ F     L  +R G+++W ++DD  E+  F DVI YKG+FYA+D   R+   
Sbjct: 575  DEYGLMMIHFRG--GLALWRLGEKKWSLIDDGAEKSHFDDVIYYKGRFYAIDYXGRIVVI 632

Query: 299  DPHTLDMTVISNSVVEESWEQR-LLEFNGDLYLIDCQL----------------FQVGCR 171
            D  +L  T +++ V       R  +E  G+L+L+D  +                + V   
Sbjct: 633  DADSLKATELASPVHGSRGNHRHFVESFGELFLVDKYVVTFCNNYSDIVSVVPDYPVHXE 692

Query: 170  VFRLDEKEKQWIQVKNLGDSVFSFGDNHSYFMSALDFPGLKGNCLLLVDYMF 15
            VF+  E+E++W  V  +GD V    D+ ++ +S+ DFPG KGNC+   +Y F
Sbjct: 693  VFKFIEEEQKWDWVSGIGDRVLFVDDDRTFSLSSTDFPGFKGNCVYFTEYXF 744



 Score =  153 bits (386), Expect = 7e-35
 Identities = 105/337 (31%), Positives = 177/337 (52%), Gaps = 25/337 (7%)
 Frame = -2

Query: 950  SELPRDILTKIAEDCIETHLQTIQFRAVCNSWRSSV----PLPTPSLASPVVLPLTQLLN 783
            S LP+D+L KIA   ++T +  + FR VC+SW SSV    P   P L+  +  P+    N
Sbjct: 9    SHLPKDLLAKIAGR-LDTRIDFLHFRGVCSSWMSSVSPTFPSKNPLLSLKLPYPIASNAN 67

Query: 782  YKT---------GFCELLENTIYTIRPKQLQPESCSKLLLVQVDVHAKPRNVINIIDPLS 630
                        G   L+E+T+Y ++P +  P+S  + LLV+++   KP     ++D LS
Sbjct: 68   LNIXDPDTRNPRGSFSLIESTLYYLQPLRQTPDS-KEALLVKLE-EPKPGKG-RLMDTLS 124

Query: 629  NIVIKPIPRQFPRGLNLLDYKICGFYKEYYL---------VTIDSNENCNVRKVTLSSSG 477
               I+ +P+ FP+ LN L++++    K Y L         +T    ++  ++KV + S G
Sbjct: 125  RCAIQHLPKNFPKVLNTLNFRVREVGKAYGLRFFDVRGKPITSFEFKSILIKKVIMFSKG 184

Query: 476  SINHLVVMGFDSLNKLVCFRSGDERWMVLDD-KERCRFKDVILYKGQFYAVDSTRRVCTF 300
                L+++      +L  +R G+E+W ++DD  E+  F DVI YKG+FYA+D   R+   
Sbjct: 185  DEYGLMMIHIRG--RLALWRLGEEKWSLIDDGAEKSHFDDVIYYKGRFYAIDYKGRIVVI 242

Query: 299  DPHTLDMTVISNSVV-EESWEQRLLEFNGDLYLI-DCQLFQVGCRVFRLDEKEKQWIQVK 126
            D  +L  T +++ V       +  +E  G+L ++ D   + V   VF+  E+E++W  V 
Sbjct: 243  DADSLKATELASPVHGSRGTHKHFVESFGELDIVADVPDYPVHFEVFKFIEEEQKWDWVS 302

Query: 125  NLGDSVFSFGDNHSYFMSALDFPGLKGNCLLLVDYMF 15
            ++GD V   GD+ ++ +S+ DFPG KGNC+      F
Sbjct: 303  DIGDRVLFVGDDRTFSLSSTDFPGFKGNCVYFTQDCF 339


>ref|XP_002278547.2| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 405

 Score =  151 bits (382), Expect = 2e-34
 Identities = 108/356 (30%), Positives = 180/356 (50%), Gaps = 44/356 (12%)
 Frame = -2

Query: 950  SELPRDILTKIAEDCIETHLQTIQFRAVCNSWRSSV----PLPTPSLASPVVLPLTQLLN 783
            S LP+D+L KIA   ++T +  + FR VC+SW SSV    P   P L+  +  P+    N
Sbjct: 9    SHLPKDLLAKIAGR-LDTRIDFLHFRGVCSSWMSSVSPTFPRKNPILSLKLPYPIASNAN 67

Query: 782  YKT---------GFCELLENTIYTIRPKQLQPESCSKLLLVQVDVHAKPRNVINIIDPLS 630
                        G   L+E+T+Y ++P +  P+S  + LLV+++   KP     ++D LS
Sbjct: 68   LNICDPDTRNPHGSFSLIESTLYYLQPLRQTPDS-KEALLVKLE-EPKPGKG-RLMDTLS 124

Query: 629  NIVIKPIPRQFPRGLNLLDYKICGFYKEYYL---------VTIDSNENCNVRKVTLSSSG 477
               I+ +P+ FP+ LN L++++    K Y L         +T    ++  ++KV + S G
Sbjct: 125  RCAIQHLPKNFPKVLNTLNFRVREVGKAYGLRFFDVRGKPITSFEFKSILIKKVIMFSKG 184

Query: 476  SINHLVVMGFDSLNKLVCFRSGDERWMVLDD-KERCRFKDVILYKGQFYAVDSTRRVCTF 300
                L+++      +L  +R G+E+W ++DD  E+  F DVI YKG+FYA+D   R+   
Sbjct: 185  DEYGLMMIHIRG--RLALWRLGEEKWSLIDDGAEKSHFDDVIYYKGRFYAIDYKGRIVVI 242

Query: 299  DPHTLDMTVISNSVV-EESWEQRLLEFNGDLYLIDCQL---FQVGCR------------- 171
            D  +L  T +++ V       +  +E  G+L+L+D  L    Q+ C              
Sbjct: 243  DADSLKATELASPVHGSRGTHKHFVESFGELFLVDKYLDDELQIFCNDYSDIVADVPDYP 302

Query: 170  ----VFRLDEKEKQWIQVKNLGDSVFSFGDNHSYFMSALDFPGLKGNCLLLVDYMF 15
                VF+  E+E++W  V ++GD V   GD+ ++ +S+ DFPG KGNC+      F
Sbjct: 303  VHFEVFKFIEEEQKWDWVSDIGDRVLFVGDDRTFSLSSTDFPGFKGNCVYFTQDCF 358


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
            gi|222850098|gb|EEE87645.1| f-box family protein [Populus
            trichocarpa]
          Length = 410

 Score =  143 bits (361), Expect = 5e-32
 Identities = 107/353 (30%), Positives = 172/353 (48%), Gaps = 37/353 (10%)
 Frame = -2

Query: 950  SELPRDILTKIAEDCIETHLQTIQFRAVCNSWRSSVPLPTPSLASPV--VLPLTQLLNYK 777
            + LP+D++  I++ C++T    ++FR+VCNSWRSS+P  +P L+S    +LP   + +  
Sbjct: 5    THLPKDLIELISK-CLDTSTDLLRFRSVCNSWRSSIPPKSPRLSSNTFKILPNDGISHTS 63

Query: 776  TGFCELLENTIYTIR--PKQLQPESCSKLLLVQVDVHAKPRNVINIIDPLSNIVIKPIPR 603
             GF  L + +I+ I       Q +    L+ ++ DV  K     ++ DPLS      +  
Sbjct: 64   FGF-SLFKRSIFLIGLPNSHNQTDLQGWLVKIEEDVPGKK----HLFDPLSRCRSTSLHH 118

Query: 602  QFPRGLNLLDYKICGFYKEYYLVTIDSNENCN---------VRKVTLSSSGSINHLVVMG 450
              PR L+L++ +I     EY L  +    N +         + KV +         V++ 
Sbjct: 119  SLPRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMIWLNCETEFVLLT 178

Query: 449  FDSLNKLVCFRSGDERWMVLDDKERCRFKDVILYKGQFYAVDSTRRVCTFDPHTLDMTVI 270
                 KL  F+SGD+RW ++++     F DVI+YKG+FYAVD+T R       T D+ ++
Sbjct: 179  IHVSGKLAMFKSGDKRWTIINEMPS-PFDDVIVYKGRFYAVDNTGRTVVVALDT-DLGLV 236

Query: 269  SNSVVEESWEQRLLEFNGDLYLIDCQLF------------------------QVGCRVFR 162
             + V     ++ L+E  GDL L+D  L                          V  +VF+
Sbjct: 237  GDPVFGGD-KKYLVESKGDLLLVDMYLSIDTDEGLSIGNDVVQDLVQYMSERTVRFKVFK 295

Query: 161  LDEKEKQWIQVKNLGDSVFSFGDNHSYFMSALDFPGLKGNCLLLVDYMFKPKE 3
            L+E+ K WI+VKNL D V   GD+ ++  SA +  G KGNC+   D  F  +E
Sbjct: 296  LNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFEDNFFYSRE 348


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
            gi|222848503|gb|EEE86050.1| f-box family protein [Populus
            trichocarpa]
          Length = 469

 Score =  140 bits (353), Expect = 4e-31
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 37/349 (10%)
 Frame = -2

Query: 950  SELPRDILTKIAEDCIETHLQTIQFRAVCNSWRSSVPLPTPSLASPV--VLPLTQLLNYK 777
            + LP+D++  I++  ++T    ++FR+VCNSWRSS+P   P L+S    +LP   + +  
Sbjct: 5    THLPKDLMELISKR-LDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGISHTS 63

Query: 776  TGFCELLENTIYTIR--PKQLQPESCSKLLLVQVDVHAKPRNVINIIDPLSNIVIKPIPR 603
             GF  L + T++ +       Q ++   L+ ++ DV  K     ++ DPLS      +P 
Sbjct: 64   FGF-SLFKRTVFLVGLPNSHNQTDTQGWLIKIEEDVPGKK----HLFDPLSRCRSTSLPN 118

Query: 602  QFPRGLNLLDYKICGFYKEYYLVTIDSNENCN---------VRKVTLSSSGSINHLVVMG 450
              PR L+L++ +I     EY L  ++   N +         + KV +    S+   V++ 
Sbjct: 119  NLPRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMIWLNSLTEFVLLT 178

Query: 449  FDSLNKLVCFRSGDERWMVLDDKERCRFKDVILYKGQFYAVDSTRRVCTFDPHTLDMTVI 270
                 KL  F+SGD+RW ++++     F DVI+YKG+FYAVD+T R       T ++ ++
Sbjct: 179  IHVSGKLAIFKSGDKRWTIINEMPS-PFDDVIVYKGRFYAVDNTGRTVVVAMDT-NLGLV 236

Query: 269  SNSVVEESWEQRLLEFNGDLYLIDCQLF------------------------QVGCRVFR 162
             N V     ++ L+E  GDL L+D  L                          V  +VF+
Sbjct: 237  GNPVFGGD-KKYLVESKGDLLLVDMYLSIDSDEGLSIGHDVVQDLVQYMSERTVWFKVFK 295

Query: 161  LDEKEKQWIQVKNLGDSVFSFGDNHSYFMSALDFPGLKGNCLLLVDYMF 15
            L+E+ K WI+V +L D V   GD+ ++  SA +  G KGNC+   D  F
Sbjct: 296  LNEEGKCWIEVNDLEDRVLFLGDDLTFSASASELSGCKGNCIFFNDDFF 344


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score =  139 bits (351), Expect = 8e-31
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 25/337 (7%)
 Frame = -2

Query: 950 SELPRDILTKIAEDCIETHLQTIQFRAVCNSWRSSVPLPTPSLASPV-VLPLTQLLNYKT 774
           + LPRD+L  IA+  +++H   ++FR+VC+SWRSS P    S+ S + +LP T       
Sbjct: 5   ANLPRDLLHLIAKR-LDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSEITW 63

Query: 773 GFCELLENTIYTIRPKQLQPESCSKLLLVQVDVHAKPRNVINIIDPLSNIVIKPIPRQFP 594
            F  L + +I  +     + ++     L++++    P  VI +I+PL+    + +P  FP
Sbjct: 64  AFY-LSKRSILQLGLPDSRAQTTPNSWLIKIE--EDPSGVIRLINPLTTFKFRHLPPDFP 120

Query: 593 RGLNLLDYKICGFYKEYYLVTIDSNENCN-------VRKVTLSSSGSINHLVVMGFDSLN 435
           +  +    ++    +EY L  +D     N       + KV   S G+ +   ++      
Sbjct: 121 KTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAFCS-GNGDDFWLLTIHLSG 179

Query: 434 KLVCFRSGDERWMVLDDKERCRFKDVILYKGQFYAVDSTRRVCTFDPHTLDMTVIS--NS 261
           KL  FRSGD++WM++DD +   + DVI + G+FYAVD+T R    D       V++   S
Sbjct: 180 KLAMFRSGDKKWMIIDDMQS-PYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAAS 238

Query: 260 VVEESWEQRLLEFNGDLYLIDCQLFQ---------------VGCRVFRLDEKEKQWIQVK 126
            V    ++ L+E  G+L L+D                    +  +VFRLD++E++W++++
Sbjct: 239 SVFGGDKKVLVESEGELLLVDTYFTMYHDDDEHVRWMIERMIHFKVFRLDQREQKWVEIE 298

Query: 125 NLGDSVFSFGDNHSYFMSALDFPGLKGNCLLLVDYMF 15
           +LGD +   GD+ S+   A DF G KGN +   +  F
Sbjct: 299 SLGDRLLFLGDDSSFSARASDFYGCKGNSICFTNISF 335