BLASTX nr result
ID: Coptis24_contig00002544
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002544 (1212 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282652.1| PREDICTED: ATP-dependent Clp protease proteo... 392 e-106 ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteo... 390 e-106 gb|AFK33568.1| unknown [Lotus japonicus] 389 e-105 ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteo... 388 e-105 ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subun... 382 e-104 >ref|XP_002282652.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Vitis vinifera] Length = 291 Score = 392 bits (1006), Expect = e-106 Identities = 194/220 (88%), Positives = 212/220 (96%) Frame = +2 Query: 227 SRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLS 406 +RGA+ DAMGLLL+ERIVFLGN +DDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLS Sbjct: 72 ARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLS 131 Query: 407 ATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGASGQ 586 ATMAIYD+VQLVRAD+ST+ALGI+ASTASIILGGGTKGKR AMPNTRIM+HQPLGGASGQ Sbjct: 132 ATMAIYDIVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQ 191 Query: 587 AIDVEIQAKEIMHNKNNVTRIISGFTGRNFDQVKKDIDRDRYMSPIEAVEYGIIDGVIDR 766 AIDVEIQA+EIMHNK+NVT+II+GF+GR+F+QV+KDIDRDRYMSPIEAVEYGIID VIDR Sbjct: 192 AIDVEIQAQEIMHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIEAVEYGIIDAVIDR 251 Query: 767 DCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 886 D IIPL+PVPEKVKSR NYEEI KDP KFLTPDIPDDEIY Sbjct: 252 DSIIPLVPVPEKVKSRLNYEEISKDPRKFLTPDIPDDEIY 291 >ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Glycine max] Length = 306 Score = 390 bits (1003), Expect = e-106 Identities = 194/222 (87%), Positives = 210/222 (94%) Frame = +2 Query: 221 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 400 TA+RGA+ D MGLLLRERIVFLG+ IDDFVADAI+SQ+LLLDAQDPTKDIRLFINS GGS Sbjct: 85 TAARGAEGDVMGLLLRERIVFLGSSIDDFVADAIMSQMLLLDAQDPTKDIRLFINSTGGS 144 Query: 401 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 580 LSATMAIYD VQLVRAD+ST+ALGIAASTAS+ILGGGTKGKR AMPNTRIM+HQPLGGAS Sbjct: 145 LSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMIHQPLGGAS 204 Query: 581 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFDQVKKDIDRDRYMSPIEAVEYGIIDGVI 760 GQAIDVEIQAKE+MHNKNN+TRIIS FTGR+F+QV+KDIDRD+YMSPIEAVEYGIIDGVI Sbjct: 205 GQAIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIIDGVI 264 Query: 761 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 886 DRD IIPLMPVPE+VKS NYEEI KDP KFLTPDIPDDEIY Sbjct: 265 DRDSIIPLMPVPERVKSTLNYEEISKDPRKFLTPDIPDDEIY 306 >gb|AFK33568.1| unknown [Lotus japonicus] Length = 308 Score = 389 bits (998), Expect = e-105 Identities = 203/265 (76%), Positives = 223/265 (84%), Gaps = 4/265 (1%) Frame = +2 Query: 104 CSIKTPASRIISAAGHVELQTSF----LKNXXXXXXXXXXXXXTASRGADTDAMGLLLRE 271 C TP I++A+ + +F LK TA RGA+TDAM LLLRE Sbjct: 44 CHRTTPLKCILTASPNHSKNANFEPESLKPRITFQMSSPQTPATAIRGAETDAMWLLLRE 103 Query: 272 RIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLSATMAIYDVVQLVRAD 451 RIVFLG+ IDDFVADAI+SQLLLLDAQDP+KDI+LFINSPGGSLSATMAIYD VQLVRAD Sbjct: 104 RIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGSLSATMAIYDAVQLVRAD 163 Query: 452 ISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGASGQAIDVEIQAKEIMHNK 631 +STIALGIAASTASIILGGGTKGKR AMPNTRIM+HQPLGGASGQAIDVEIQAKE+MHNK Sbjct: 164 VSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNK 223 Query: 632 NNVTRIISGFTGRNFDQVKKDIDRDRYMSPIEAVEYGIIDGVIDRDCIIPLMPVPEKVKS 811 NNVTRIISGFTGR F+QV+KDIDRDRYMSPIEAVEYGIIDGVID++ IIPL PVPE+V+S Sbjct: 224 NNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDKESIIPLEPVPERVRS 283 Query: 812 RYNYEEIGKDPMKFLTPDIPDDEIY 886 NYEEI KDP KFLTP+IPDDEIY Sbjct: 284 TLNYEEISKDPRKFLTPEIPDDEIY 308 >ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Glycine max] Length = 306 Score = 388 bits (997), Expect = e-105 Identities = 194/222 (87%), Positives = 209/222 (94%) Frame = +2 Query: 221 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 400 TA+RGA+ D MGLLLRERIVFLG+ IDDFVADAI+SQLLLLDA DPTKDIRLFINS GGS Sbjct: 85 TAARGAEGDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDALDPTKDIRLFINSTGGS 144 Query: 401 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 580 LSATMAIYD VQLVRAD+ST+ALGIAASTAS+ILGGGTKGKR AMPNTRIM+HQPLGGAS Sbjct: 145 LSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMVHQPLGGAS 204 Query: 581 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFDQVKKDIDRDRYMSPIEAVEYGIIDGVI 760 GQAIDVEIQAKE+MHNKNN+TRIIS FTGR+F+QV+KDIDRD+YMSPIEAVEYGIIDGVI Sbjct: 205 GQAIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIIDGVI 264 Query: 761 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 886 DRD IIPLMPVPE+VKS NYEEI KDP KFLTPDIPDDEIY Sbjct: 265 DRDSIIPLMPVPERVKSTLNYEEISKDPRKFLTPDIPDDEIY 306 >ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis] gi|223540927|gb|EEF42485.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis] Length = 294 Score = 382 bits (982), Expect = e-104 Identities = 193/222 (86%), Positives = 206/222 (92%) Frame = +2 Query: 221 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 400 TA RGA++DAMGLLLRERIVFLGN IDDFVADA ISQLLLLDAQDPTKDIRLFIN PGGS Sbjct: 73 TAMRGAESDAMGLLLRERIVFLGNNIDDFVADATISQLLLLDAQDPTKDIRLFINCPGGS 132 Query: 401 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 580 LSATMAIYDVVQLVRAD+ST+ALGI+ASTASIILGGGTKGKR AMPNTRIM+HQPLGGAS Sbjct: 133 LSATMAIYDVVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMVHQPLGGAS 192 Query: 581 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFDQVKKDIDRDRYMSPIEAVEYGIIDGVI 760 GQAIDVEIQA+EIMHNKNNV RIISGFTGR +QV KDIDRDRYMSPIEAVEYGIIDGVI Sbjct: 193 GQAIDVEIQAREIMHNKNNVVRIISGFTGRTVEQVLKDIDRDRYMSPIEAVEYGIIDGVI 252 Query: 761 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 886 D D IIPL PVPE+VK +YEE+ KDPMKFLTPD+PDDEI+ Sbjct: 253 DGDSIIPLAPVPERVKPTLSYEEMRKDPMKFLTPDVPDDEIF 294