BLASTX nr result

ID: Coptis24_contig00002517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002517
         (1384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248...    60   1e-06
dbj|BAE46416.1| TATA binding protein associated factor [Solanum ...    58   5e-06
ref|XP_003528481.1| PREDICTED: uncharacterized protein LOC100783...    58   5e-06
gb|ADL36631.1| C2H2L domain class transcription factor [Malus x ...    58   5e-06
ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-06

>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
            gi|297743015|emb|CBI35882.3| unnamed protein product
            [Vitis vinifera]
          Length = 587

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 34/56 (60%), Positives = 35/56 (62%)
 Frame = +3

Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382
            SPRM G A QKSLSLTGSQPD                 EA+NQ LGKRKIQDLVSQ
Sbjct: 385  SPRMAGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQ 440


>dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum]
          Length = 638

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 33/56 (58%), Positives = 34/56 (60%)
 Frame = +3

Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382
            SPRM   A QKSLSLTGSQPD                 EA+NQ LGKRKIQDLVSQ
Sbjct: 441  SPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQ 496


>ref|XP_003528481.1| PREDICTED: uncharacterized protein LOC100783017 [Glycine max]
          Length = 599

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 33/56 (58%), Positives = 34/56 (60%)
 Frame = +3

Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382
            SPRM G A QKSLSLTGSQPD                 EA NQ LGKRKIQDLV+Q
Sbjct: 398  SPRMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQ 453


>gb|ADL36631.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 630

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 33/56 (58%), Positives = 33/56 (58%)
 Frame = +3

Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382
            SPRM G A QKSLSLTGS PD                 EA NQ LGKRKIQDLVSQ
Sbjct: 431  SPRMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQ 486


>ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|222846852|gb|EEE84399.1|
            predicted protein [Populus trichocarpa]
          Length = 656

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 33/56 (58%), Positives = 33/56 (58%)
 Frame = +3

Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382
            SPRM G   QKSLSLTGSQPD                 EA NQ LGKRKIQDLVSQ
Sbjct: 403  SPRMPGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQ 458


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