BLASTX nr result
ID: Coptis24_contig00002517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002517 (1384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248... 60 1e-06 dbj|BAE46416.1| TATA binding protein associated factor [Solanum ... 58 5e-06 ref|XP_003528481.1| PREDICTED: uncharacterized protein LOC100783... 58 5e-06 gb|ADL36631.1| C2H2L domain class transcription factor [Malus x ... 58 5e-06 ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-06 >ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera] gi|297743015|emb|CBI35882.3| unnamed protein product [Vitis vinifera] Length = 587 Score = 60.5 bits (145), Expect = 1e-06 Identities = 34/56 (60%), Positives = 35/56 (62%) Frame = +3 Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382 SPRM G A QKSLSLTGSQPD EA+NQ LGKRKIQDLVSQ Sbjct: 385 SPRMAGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQ 440 >dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum] Length = 638 Score = 58.2 bits (139), Expect = 5e-06 Identities = 33/56 (58%), Positives = 34/56 (60%) Frame = +3 Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382 SPRM A QKSLSLTGSQPD EA+NQ LGKRKIQDLVSQ Sbjct: 441 SPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQ 496 >ref|XP_003528481.1| PREDICTED: uncharacterized protein LOC100783017 [Glycine max] Length = 599 Score = 58.2 bits (139), Expect = 5e-06 Identities = 33/56 (58%), Positives = 34/56 (60%) Frame = +3 Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382 SPRM G A QKSLSLTGSQPD EA NQ LGKRKIQDLV+Q Sbjct: 398 SPRMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQ 453 >gb|ADL36631.1| C2H2L domain class transcription factor [Malus x domestica] Length = 630 Score = 58.2 bits (139), Expect = 5e-06 Identities = 33/56 (58%), Positives = 33/56 (58%) Frame = +3 Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382 SPRM G A QKSLSLTGS PD EA NQ LGKRKIQDLVSQ Sbjct: 431 SPRMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQ 486 >ref|XP_002299594.1| predicted protein [Populus trichocarpa] gi|222846852|gb|EEE84399.1| predicted protein [Populus trichocarpa] Length = 656 Score = 57.8 bits (138), Expect = 7e-06 Identities = 33/56 (58%), Positives = 33/56 (58%) Frame = +3 Query: 1215 SPRMLGSAVQKSLSLTGSQPDXXXXXXXXXXXXXXXXXEANNQYLGKRKIQDLVSQ 1382 SPRM G QKSLSLTGSQPD EA NQ LGKRKIQDLVSQ Sbjct: 403 SPRMPGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQ 458