BLASTX nr result

ID: Coptis24_contig00002508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002508
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE54085.1| superoxide dismutase [Fagus sylvatica]                282   7e-74
ref|NP_001105704.1| superoxide dismutase [Cu-Zn] 4AP [Zea mays] ...   280   2e-73
sp|P23346.2|SODC5_MAIZE RecName: Full=Superoxide dismutase [Cu-Z...   278   7e-73
gb|ACF81870.1| unknown [Zea mays] gi|414866826|tpg|DAA45383.1| T...   278   7e-73
gb|ADN04915.1| csd1 [Pleioblastus fortunei]                           275   8e-72

>emb|CAE54085.1| superoxide dismutase [Fagus sylvatica]
          Length = 166

 Score =  282 bits (721), Expect = 7e-74
 Identities = 132/160 (82%), Positives = 141/160 (88%)
 Frame = +3

Query: 78  RGVLRSHITMVKGVAVLNSPSGVSGTIYFTQEANGPTTVTGSVSGLTPGNHGFHVHALGD 257
           RGVLRSH TM KGVAVL+S  GV GTIYF QE +GPTTVTG++SGL PG HGFHVHALGD
Sbjct: 6   RGVLRSHRTMAKGVAVLSSNEGVCGTIYFAQEGDGPTTVTGNISGLKPGLHGFHVHALGD 65

Query: 258 TTNGCLSTGPHYNPASKEHGAPHDENRHAGDLGNVTAGDDGTVNLNIVDSQIPLTGPNSI 437
           TTNGC+STGPH+NPA KEHGAP D NRHAGDLGNV  GDDGTV+  I+D QIPL GPNSI
Sbjct: 66  TTNGCMSTGPHFNPAGKEHGAPEDANRHAGDLGNVNVGDDGTVSFTIIDKQIPLCGPNSI 125

Query: 438 IGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 557
           IGRAVVVH DPDDLGKGGHELSKSTGNAGGR+ACGIIGLQ
Sbjct: 126 IGRAVVVHGDPDDLGKGGHELSKSTGNAGGRIACGIIGLQ 165


>ref|NP_001105704.1| superoxide dismutase [Cu-Zn] 4AP [Zea mays]
           gi|134597|sp|P23345.2|SODC4_MAIZE RecName:
           Full=Superoxide dismutase [Cu-Zn] 4A
           gi|6018682|emb|CAB57992.1| superoxide dismutase-4AP [Zea
           mays] gi|238013448|gb|ACR37759.1| unknown [Zea mays]
          Length = 152

 Score =  280 bits (717), Expect = 2e-73
 Identities = 133/151 (88%), Positives = 138/151 (91%)
 Frame = +3

Query: 105 MVKGVAVLNSPSGVSGTIYFTQEANGPTTVTGSVSGLTPGNHGFHVHALGDTTNGCLSTG 284
           MVK VAVL S  GV GTI+FTQE +GPTTVTGSVSGL PG HGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 285 PHYNPASKEHGAPHDENRHAGDLGNVTAGDDGTVNLNIVDSQIPLTGPNSIIGRAVVVHA 464
           PHYNPASKEHGAP DENRHAGDLGNVTAG DG  N+N+ DSQIPLTGPNSIIGRAVVVHA
Sbjct: 61  PHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHA 120

Query: 465 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 557
           DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151


>sp|P23346.2|SODC5_MAIZE RecName: Full=Superoxide dismutase [Cu-Zn] 4AP
           gi|195606814|gb|ACG25237.1| superoxide dismutase 2 [Zea
           mays] gi|195620200|gb|ACG31930.1| superoxide dismutase 2
           [Zea mays] gi|195621104|gb|ACG32382.1| superoxide
           dismutase 2 [Zea mays] gi|195623190|gb|ACG33425.1|
           superoxide dismutase 2 [Zea mays]
           gi|195641776|gb|ACG40356.1| superoxide dismutase 2 [Zea
           mays] gi|195659231|gb|ACG49083.1| superoxide dismutase 2
           [Zea mays] gi|223974583|gb|ACN31479.1| unknown [Zea
           mays] gi|413955740|gb|AFW88389.1| superoxide dismutase9
           isoform 1 [Zea mays] gi|413955741|gb|AFW88390.1|
           superoxide dismutase9 isoform 2 [Zea mays]
           gi|413955742|gb|AFW88391.1| superoxide dismutase9
           isoform 3 [Zea mays] gi|413955743|gb|AFW88392.1|
           superoxide dismutase9 isoform 4 [Zea mays]
           gi|413955744|gb|AFW88393.1| superoxide dismutase9
           isoform 5 [Zea mays]
          Length = 152

 Score =  278 bits (712), Expect = 7e-73
 Identities = 132/151 (87%), Positives = 137/151 (90%)
 Frame = +3

Query: 105 MVKGVAVLNSPSGVSGTIYFTQEANGPTTVTGSVSGLTPGNHGFHVHALGDTTNGCLSTG 284
           MVK VAVL S  GV GTI+FTQE +GPT VTGSVSGL PG HGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 285 PHYNPASKEHGAPHDENRHAGDLGNVTAGDDGTVNLNIVDSQIPLTGPNSIIGRAVVVHA 464
           PHYNPASKEHGAP DENRHAGDLGNVTAG DG  N+N+ DSQIPLTGPNSIIGRAVVVHA
Sbjct: 61  PHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHA 120

Query: 465 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 557
           DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151


>gb|ACF81870.1| unknown [Zea mays] gi|414866826|tpg|DAA45383.1| TPA: superoxide
           dismutase4 isoform 1 [Zea mays]
           gi|414866827|tpg|DAA45384.1| TPA: superoxide dismutase4
           isoform 2 [Zea mays]
          Length = 152

 Score =  278 bits (712), Expect = 7e-73
 Identities = 132/151 (87%), Positives = 137/151 (90%)
 Frame = +3

Query: 105 MVKGVAVLNSPSGVSGTIYFTQEANGPTTVTGSVSGLTPGNHGFHVHALGDTTNGCLSTG 284
           MVK VAVL S  GV GTI+FTQE +GPTTVTGSVSGL PG HGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLGSSDGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 285 PHYNPASKEHGAPHDENRHAGDLGNVTAGDDGTVNLNIVDSQIPLTGPNSIIGRAVVVHA 464
           PHYNPASKEHGAP DENRHAGDLGNVTAG DG  N+N+ DSQIPLTGPNSIIGRAVVVHA
Sbjct: 61  PHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHA 120

Query: 465 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 557
           DPDDLGKGGHEL KSTGNAGGRVACGIIGLQ
Sbjct: 121 DPDDLGKGGHELRKSTGNAGGRVACGIIGLQ 151


>gb|ADN04915.1| csd1 [Pleioblastus fortunei]
          Length = 152

 Score =  275 bits (703), Expect = 8e-72
 Identities = 130/151 (86%), Positives = 138/151 (91%)
 Frame = +3

Query: 105 MVKGVAVLNSPSGVSGTIYFTQEANGPTTVTGSVSGLTPGNHGFHVHALGDTTNGCLSTG 284
           MVK VAVL S  GV GTI+F+QE +GPTTVTGSVSGL PG HGFHVHALGDTTNGC+STG
Sbjct: 1   MVKAVAVLTSSEGVKGTIFFSQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 285 PHYNPASKEHGAPHDENRHAGDLGNVTAGDDGTVNLNIVDSQIPLTGPNSIIGRAVVVHA 464
           PH+NPA KEHGAP DENRHAGDLGNVTAG DG  N+N+VDSQIPLTGP+SIIGRAVVVHA
Sbjct: 61  PHFNPAGKEHGAPEDENRHAGDLGNVTAGADGVANVNVVDSQIPLTGPHSIIGRAVVVHA 120

Query: 465 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 557
           DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 151


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