BLASTX nr result
ID: Coptis24_contig00002501
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00002501 (969 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR18783.1| class S F-box protein [Nicotiana alata] 117 5e-24 gb|ABR18786.1| class S F-box protein [Nicotiana alata] 113 6e-23 gb|ABR18787.1| class S F-box protein [Nicotiana alata] 111 3e-22 ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi... 110 4e-22 ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis... 108 2e-21 >gb|ABR18783.1| class S F-box protein [Nicotiana alata] Length = 388 Score = 117 bits (292), Expect = 5e-24 Identities = 93/309 (30%), Positives = 140/309 (45%), Gaps = 31/309 (10%) Frame = -2 Query: 836 KLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFIGGRYS 657 KLP D+VF +L R P+K++ + + +SK WY FIQ F LH RTT + + + Sbjct: 8 KLPEDLVFCMLLRCPVKSLMRFKCISKVWYHFIQSTTFINLHLNRTTSVENEFIL---FK 64 Query: 656 QSYVTDPECFLNSKKRVTAYDLE-----LKEFKDNFRVPNGSWICFDVVGTVNGLICFSE 492 S D F N ++ +D + ++ N S F ++G NGLI ++ Sbjct: 65 HSIKEDTGEFKNVLSFLSGHDNGALNPLFPDIDVSYMASNCSCTFFPLIGPCNGLIALTD 124 Query: 491 MGNYCSSPYYICNPITLDYVILPRSPMICYGHM-----ASGFGFDSVSNQYKVFRIL--- 336 + + NP T ++ +LP SP C A GFGFDS++N YKV RI Sbjct: 125 -----TITTILINPATRNFRLLPPSPFGCPNGYHRSVEALGFGFDSIANNYKVVRISEIF 179 Query: 335 ----------RSNEVEVFTLGSDCWRPI-RTNTSFIRSMNRSHALLNGCIHWVADSRVDG 189 R ++V+V+ L D WR + I + S L N +HW A + + Sbjct: 180 WNPVYDYPGPRESKVDVYDLSIDSWRELDHVQVPLIYWLPCSETLYNEVVHWFASTDLS- 238 Query: 188 KACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLC-------VSLCDTRAD 30 VIL ++ TE F I+MP + F + Y L++L E L +S+ + Sbjct: 239 ---LVILCFDMCTEIFRNIKMPD-TFIFDNAEFYGLVILSESLTLICYPNPISINPIQEL 294 Query: 29 RETWVMKEY 3 WVMKEY Sbjct: 295 THIWVMKEY 303 >gb|ABR18786.1| class S F-box protein [Nicotiana alata] Length = 388 Score = 113 bits (283), Expect = 6e-23 Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 34/317 (10%) Frame = -2 Query: 851 EDLFSKLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFI 672 + + KLP D+V ILSR +K++ + +++SK+WY+ IQ F +H R+T I FI Sbjct: 4 DGIMKKLPEDVVIYILSRFSVKSLLRFKFISKSWYTLIQSSTFINVHLNRST-ITKNEFI 62 Query: 671 GGRYSQSYVTDPECFLNSKKRVTAYD-----LELKEFKDNFRVPNGSWICFDVVGTVNGL 507 +S+S+ + E F N +++ D + L++ + ++ ++VG NGL Sbjct: 63 --LFSRSFRIETEGFKNVLSIISSDDYNDLNVVLQDLDLPYLTFTPNYHFNELVGPCNGL 120 Query: 506 ICFSEMGNYCSSPYYICNPITLDYVILPRSPMIC-YGHMAS-----GFGFDSVSNQYKVF 345 I ++ + + NP T +Y++LP SP +C G+ S GFGFDS+ N YK Sbjct: 121 IVLTDDDDI----IVLFNPATKNYMLLPPSPFVCSKGYHRSFIGGVGFGFDSIGNDYKFV 176 Query: 344 RIL------------RSNEVEVFTLGSDCWRPIRTNTSFIRSM--NRSHALL-NGCIHWV 210 RI R +VEV+ L SD WR + + ++ N+ +L NG HW Sbjct: 177 RISEVFLDTYWGPEEREQKVEVYDLRSDSWRDLNHVDQQLPTIFWNQCFEMLHNGAFHWY 236 Query: 209 ADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERL---CVSLCDT 39 A G IL + +TE F ++MP N + Y L V+ E L C D+ Sbjct: 237 A----VGDLTYEILCFDFSTEIFRSMKMPESCNAYD-GKRYSLAVVNESLTLICYPSPDS 291 Query: 38 RADR-----ETWVMKEY 3 D+ + W+M EY Sbjct: 292 EIDQTQNTMDIWIMMEY 308 >gb|ABR18787.1| class S F-box protein [Nicotiana alata] Length = 392 Score = 111 bits (277), Expect = 3e-22 Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 38/320 (11%) Frame = -2 Query: 848 DLFSKLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFIG 669 D +KLP D++ DI+ RLP K++ + + VSKTWY I P F +H+ P FI Sbjct: 6 DQRTKLPYDVMIDIMKRLPAKSVIRIKCVSKTWYYMINSPDFISIHY--NYDYPSKHFIV 63 Query: 668 GRYSQSYVTDPECFLNSKKRVTAY--DLELKEFKDNFRVPNGSWICFDVVGTVNGLICFS 495 + + + N K ++ + D LK N + +I ++ G NG++C Sbjct: 64 FKRYLEIDAEESIYYNGKNMLSVHCNDDSLKSVAPNTEYLD-DYIGVNIAGPCNGIVC-- 120 Query: 494 EMGNYCSSPYYICNPITLDY-----VILPRSPMIC-------YGHMASGFGFDSVSNQYK 351 +G+Y Y NP ++ ILP P + + M G GFD +N YK Sbjct: 121 -IGSYRGIVLY--NPTLREFWELPPSILPPPPYLSSDKKLNYWMDMTMGIGFDPNTNDYK 177 Query: 350 VFRILRS----------------NEVEVFTLGSDCWRPIRTNTSFIRSMNRSHALLNGCI 219 V RILR ++VEV+ L ++ WR I+ + +++ SH NG Sbjct: 178 VVRILRPAHEYTFEDFDNHIRDVSKVEVYNLSTNSWRRIKDLECLVDTLHCSHVFFNGAF 237 Query: 218 HWVADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSLCDT 39 HW ++ D I+S N + E F +I P G L VL E L + Sbjct: 238 HWRRYTKSDD---YFIVSFNFSIESFQMIPSP---EGLTDEGRKSLFVLSESLALICFTE 291 Query: 38 RADRE--------TWVMKEY 3 RE WVMK+Y Sbjct: 292 NYPREMLVHQSIDIWVMKKY 311 >ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera] gi|147785390|emb|CAN68678.1| hypothetical protein VITISV_041941 [Vitis vinifera] Length = 409 Score = 110 bits (276), Expect = 4e-22 Identities = 90/310 (29%), Positives = 137/310 (44%), Gaps = 23/310 (7%) Frame = -2 Query: 863 EFKKEDLFSKLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPI-P 687 E + +LP DI+ DILSRLP+ ++ Q R+V + W Q H RT P Sbjct: 20 EGPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNP 79 Query: 686 CAAFIGGRYSQSYVTDPECFLNSKKRVTAYDLEL----KEFKDNFRVPN-GSWICFDVVG 522 C C + +++ D+ K+ +P S F+VVG Sbjct: 80 CLIL-------------HCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEFEVVG 126 Query: 521 TVNGLICFSEMGNYCSSPYYICNPITLDYVILPRSPMICYGHMASGFGFDSVSNQYKVFR 342 + NGL+C ++ + Y+ NP T D+ LP+S + GFG+ ++ YKV + Sbjct: 127 SCNGLLCLAD--SLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVK 184 Query: 341 IL-----------------RSNEVEVFTLGSDCWRPIRTNTSFIRSMNRSHALLNGCIHW 213 ++ +EV+V TLGS WR + S+ S AL+NG +HW Sbjct: 185 VVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSL-GKVSYQLDRWPSEALVNGRLHW 243 Query: 212 VADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSLCDTRA 33 V +R I+S ++A E+F I P G R +Y L+VLG L ++ + Sbjct: 244 V--TRPRRYVTRFIVSFDLADEQFREIPKPD-CGGLSR-CNYHLLVLGGCLSAAVHRSNG 299 Query: 32 DRETWVMKEY 3 E WVMKEY Sbjct: 300 KLEVWVMKEY 309 >ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus] gi|449531147|ref|XP_004172549.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus] Length = 379 Score = 108 bits (270), Expect = 2e-21 Identities = 93/302 (30%), Positives = 138/302 (45%), Gaps = 25/302 (8%) Frame = -2 Query: 833 LPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFIGGRYSQ 654 LP +++F+I LP KT+ C VSK+W S + +P F H ++ I GRY Sbjct: 5 LPHEVLFNIFLNLPPKTLILCSCVSKSWRSVVANPIFISTHRNQSLTCNRKLLILGRYYY 64 Query: 653 SYVTDPECFLNSKKRVTAYDLELKEFKDNFRVPNGSWICFDVVGTVNGLICFSEMGNYCS 474 + T+P+ + DL +E K F NG +VG NGL+CF + Sbjct: 65 NR-TEPKVRYSLHFDTDTLDL-YQELKFPFPNSNGD---LKIVGVSNGLVCFLGL----- 114 Query: 473 SPYYICNPITLDYVILPRS--PMICYG---HMASGFGFDSVSNQYKVFRIL--------- 336 + NP V +PR+ + YG A GFGFDS ++ +KV R+L Sbjct: 115 -DLLLWNPSIQRVVDVPRTSDTVTTYGVPDFYALGFGFDSCADDHKVVRLLYFADKVPFS 173 Query: 335 --RSNEVEVFTLGSDCWRPIRTNT---SFIRSMNRSHALLNGCIHWVADSRVDGKACTVI 171 RS +VE++ +G+ WR I +RS + A +NG +HW+A + I Sbjct: 174 YKRSPKVELYEVGTGSWRAINNKAPRCEIVRS-GWTQAFVNGAVHWIAYREIGTGYRCFI 232 Query: 170 LSLNVATEEFSIIQMPSISNGFKRSSSYEL--MVLGERLCVSLCDTRADR----ETWVMK 9 L ++ E FSII +P SS Y+L VLG L ++LC WV+K Sbjct: 233 LRFDIVKECFSIITLPDC---LANSSPYDLKVTVLGGALSITLCGWYCFETYMSSVWVLK 289 Query: 8 EY 3 +Y Sbjct: 290 KY 291