BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002501
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18783.1| class S F-box protein [Nicotiana alata]                117   5e-24
gb|ABR18786.1| class S F-box protein [Nicotiana alata]                113   6e-23
gb|ABR18787.1| class S F-box protein [Nicotiana alata]                111   3e-22
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   110   4e-22
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...   108   2e-21

>gb|ABR18783.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score =  117 bits (292), Expect = 5e-24
 Identities = 93/309 (30%), Positives = 140/309 (45%), Gaps = 31/309 (10%)
 Frame = -2

Query: 836 KLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFIGGRYS 657
           KLP D+VF +L R P+K++ + + +SK WY FIQ   F  LH  RTT +     +   + 
Sbjct: 8   KLPEDLVFCMLLRCPVKSLMRFKCISKVWYHFIQSTTFINLHLNRTTSVENEFIL---FK 64

Query: 656 QSYVTDPECFLNSKKRVTAYDLE-----LKEFKDNFRVPNGSWICFDVVGTVNGLICFSE 492
            S   D   F N    ++ +D         +   ++   N S   F ++G  NGLI  ++
Sbjct: 65  HSIKEDTGEFKNVLSFLSGHDNGALNPLFPDIDVSYMASNCSCTFFPLIGPCNGLIALTD 124

Query: 491 MGNYCSSPYYICNPITLDYVILPRSPMICYGHM-----ASGFGFDSVSNQYKVFRIL--- 336
                +    + NP T ++ +LP SP  C         A GFGFDS++N YKV RI    
Sbjct: 125 -----TITTILINPATRNFRLLPPSPFGCPNGYHRSVEALGFGFDSIANNYKVVRISEIF 179

Query: 335 ----------RSNEVEVFTLGSDCWRPI-RTNTSFIRSMNRSHALLNGCIHWVADSRVDG 189
                     R ++V+V+ L  D WR +       I  +  S  L N  +HW A + +  
Sbjct: 180 WNPVYDYPGPRESKVDVYDLSIDSWRELDHVQVPLIYWLPCSETLYNEVVHWFASTDLS- 238

Query: 188 KACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLC-------VSLCDTRAD 30
               VIL  ++ TE F  I+MP  +  F  +  Y L++L E L        +S+   +  
Sbjct: 239 ---LVILCFDMCTEIFRNIKMPD-TFIFDNAEFYGLVILSESLTLICYPNPISINPIQEL 294

Query: 29  RETWVMKEY 3
              WVMKEY
Sbjct: 295 THIWVMKEY 303


>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score =  113 bits (283), Expect = 6e-23
 Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 34/317 (10%)
 Frame = -2

Query: 851 EDLFSKLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFI 672
           + +  KLP D+V  ILSR  +K++ + +++SK+WY+ IQ   F  +H  R+T I    FI
Sbjct: 4   DGIMKKLPEDVVIYILSRFSVKSLLRFKFISKSWYTLIQSSTFINVHLNRST-ITKNEFI 62

Query: 671 GGRYSQSYVTDPECFLNSKKRVTAYD-----LELKEFKDNFRVPNGSWICFDVVGTVNGL 507
              +S+S+  + E F N    +++ D     + L++    +     ++   ++VG  NGL
Sbjct: 63  --LFSRSFRIETEGFKNVLSIISSDDYNDLNVVLQDLDLPYLTFTPNYHFNELVGPCNGL 120

Query: 506 ICFSEMGNYCSSPYYICNPITLDYVILPRSPMIC-YGHMAS-----GFGFDSVSNQYKVF 345
           I  ++  +       + NP T +Y++LP SP +C  G+  S     GFGFDS+ N YK  
Sbjct: 121 IVLTDDDDI----IVLFNPATKNYMLLPPSPFVCSKGYHRSFIGGVGFGFDSIGNDYKFV 176

Query: 344 RIL------------RSNEVEVFTLGSDCWRPIRTNTSFIRSM--NRSHALL-NGCIHWV 210
           RI             R  +VEV+ L SD WR +      + ++  N+   +L NG  HW 
Sbjct: 177 RISEVFLDTYWGPEEREQKVEVYDLRSDSWRDLNHVDQQLPTIFWNQCFEMLHNGAFHWY 236

Query: 209 ADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERL---CVSLCDT 39
           A     G     IL  + +TE F  ++MP   N +     Y L V+ E L   C    D+
Sbjct: 237 A----VGDLTYEILCFDFSTEIFRSMKMPESCNAYD-GKRYSLAVVNESLTLICYPSPDS 291

Query: 38  RADR-----ETWVMKEY 3
             D+     + W+M EY
Sbjct: 292 EIDQTQNTMDIWIMMEY 308


>gb|ABR18787.1| class S F-box protein [Nicotiana alata]
          Length = 392

 Score =  111 bits (277), Expect = 3e-22
 Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 38/320 (11%)
 Frame = -2

Query: 848 DLFSKLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFIG 669
           D  +KLP D++ DI+ RLP K++ + + VSKTWY  I  P F  +H+      P   FI 
Sbjct: 6   DQRTKLPYDVMIDIMKRLPAKSVIRIKCVSKTWYYMINSPDFISIHY--NYDYPSKHFIV 63

Query: 668 GRYSQSYVTDPECFLNSKKRVTAY--DLELKEFKDNFRVPNGSWICFDVVGTVNGLICFS 495
            +       +   + N K  ++ +  D  LK    N    +  +I  ++ G  NG++C  
Sbjct: 64  FKRYLEIDAEESIYYNGKNMLSVHCNDDSLKSVAPNTEYLD-DYIGVNIAGPCNGIVC-- 120

Query: 494 EMGNYCSSPYYICNPITLDY-----VILPRSPMIC-------YGHMASGFGFDSVSNQYK 351
            +G+Y     Y  NP   ++      ILP  P +        +  M  G GFD  +N YK
Sbjct: 121 -IGSYRGIVLY--NPTLREFWELPPSILPPPPYLSSDKKLNYWMDMTMGIGFDPNTNDYK 177

Query: 350 VFRILRS----------------NEVEVFTLGSDCWRPIRTNTSFIRSMNRSHALLNGCI 219
           V RILR                 ++VEV+ L ++ WR I+     + +++ SH   NG  
Sbjct: 178 VVRILRPAHEYTFEDFDNHIRDVSKVEVYNLSTNSWRRIKDLECLVDTLHCSHVFFNGAF 237

Query: 218 HWVADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSLCDT 39
           HW   ++ D      I+S N + E F +I  P    G        L VL E L +     
Sbjct: 238 HWRRYTKSDD---YFIVSFNFSIESFQMIPSP---EGLTDEGRKSLFVLSESLALICFTE 291

Query: 38  RADRE--------TWVMKEY 3
              RE         WVMK+Y
Sbjct: 292 NYPREMLVHQSIDIWVMKKY 311


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  110 bits (276), Expect = 4e-22
 Identities = 90/310 (29%), Positives = 137/310 (44%), Gaps = 23/310 (7%)
 Frame = -2

Query: 863 EFKKEDLFSKLPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPI-P 687
           E  +     +LP DI+ DILSRLP+ ++ Q R+V + W    Q       H  RT    P
Sbjct: 20  EGPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNP 79

Query: 686 CAAFIGGRYSQSYVTDPECFLNSKKRVTAYDLEL----KEFKDNFRVPN-GSWICFDVVG 522
           C                 C    + +++  D+      K+      +P   S   F+VVG
Sbjct: 80  CLIL-------------HCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEFEVVG 126

Query: 521 TVNGLICFSEMGNYCSSPYYICNPITLDYVILPRSPMICYGHMASGFGFDSVSNQYKVFR 342
           + NGL+C ++  +      Y+ NP T D+  LP+S       +  GFG+  ++  YKV +
Sbjct: 127 SCNGLLCLAD--SLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVK 184

Query: 341 IL-----------------RSNEVEVFTLGSDCWRPIRTNTSFIRSMNRSHALLNGCIHW 213
           ++                   +EV+V TLGS  WR +    S+      S AL+NG +HW
Sbjct: 185 VVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSL-GKVSYQLDRWPSEALVNGRLHW 243

Query: 212 VADSRVDGKACTVILSLNVATEEFSIIQMPSISNGFKRSSSYELMVLGERLCVSLCDTRA 33
           V  +R        I+S ++A E+F  I  P    G  R  +Y L+VLG  L  ++  +  
Sbjct: 244 V--TRPRRYVTRFIVSFDLADEQFREIPKPD-CGGLSR-CNYHLLVLGGCLSAAVHRSNG 299

Query: 32  DRETWVMKEY 3
             E WVMKEY
Sbjct: 300 KLEVWVMKEY 309


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score =  108 bits (270), Expect = 2e-21
 Identities = 93/302 (30%), Positives = 138/302 (45%), Gaps = 25/302 (8%)
 Frame = -2

Query: 833 LPIDIVFDILSRLPLKTISQCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAFIGGRYSQ 654
           LP +++F+I   LP KT+  C  VSK+W S + +P F   H  ++        I GRY  
Sbjct: 5   LPHEVLFNIFLNLPPKTLILCSCVSKSWRSVVANPIFISTHRNQSLTCNRKLLILGRYYY 64

Query: 653 SYVTDPECFLNSKKRVTAYDLELKEFKDNFRVPNGSWICFDVVGTVNGLICFSEMGNYCS 474
           +  T+P+   +        DL  +E K  F   NG      +VG  NGL+CF  +     
Sbjct: 65  NR-TEPKVRYSLHFDTDTLDL-YQELKFPFPNSNGD---LKIVGVSNGLVCFLGL----- 114

Query: 473 SPYYICNPITLDYVILPRS--PMICYG---HMASGFGFDSVSNQYKVFRIL--------- 336
               + NP     V +PR+   +  YG     A GFGFDS ++ +KV R+L         
Sbjct: 115 -DLLLWNPSIQRVVDVPRTSDTVTTYGVPDFYALGFGFDSCADDHKVVRLLYFADKVPFS 173

Query: 335 --RSNEVEVFTLGSDCWRPIRTNT---SFIRSMNRSHALLNGCIHWVADSRVDGKACTVI 171
             RS +VE++ +G+  WR I         +RS   + A +NG +HW+A   +       I
Sbjct: 174 YKRSPKVELYEVGTGSWRAINNKAPRCEIVRS-GWTQAFVNGAVHWIAYREIGTGYRCFI 232

Query: 170 LSLNVATEEFSIIQMPSISNGFKRSSSYEL--MVLGERLCVSLCDTRADR----ETWVMK 9
           L  ++  E FSII +P        SS Y+L   VLG  L ++LC            WV+K
Sbjct: 233 LRFDIVKECFSIITLPDC---LANSSPYDLKVTVLGGALSITLCGWYCFETYMSSVWVLK 289

Query: 8   EY 3
           +Y
Sbjct: 290 KY 291