BLASTX nr result

ID: Coptis24_contig00002488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002488
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267090.1| PREDICTED: uncharacterized protein LOC100249...   340   6e-91
emb|CBI26439.3| unnamed protein product [Vitis vinifera]              328   2e-87
gb|ABK95569.1| unknown [Populus trichocarpa]                          314   3e-83
ref|XP_003540005.1| PREDICTED: uncharacterized protein LOC100813...   312   1e-82
ref|XP_002524050.1| conserved hypothetical protein [Ricinus comm...   309   9e-82

>ref|XP_002267090.1| PREDICTED: uncharacterized protein LOC100249418 [Vitis vinifera]
          Length = 381

 Score =  340 bits (871), Expect = 6e-91
 Identities = 188/314 (59%), Positives = 207/314 (65%), Gaps = 17/314 (5%)
 Frame = +1

Query: 226  AISRFPSNIDAHLRPLGXXXXXXXXXXXXXXXXXXXXXXXXXX---KANRGQGNP----- 381
            AISRFPSNIDAHLRP G                               N G  NP     
Sbjct: 69   AISRFPSNIDAHLRPPGLHRPISLQPQNPNPTPNPNPNPNPNPIPNVQNPGPANPQQQQQ 128

Query: 382  --------VELEMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRILDS 537
                    VEL+MAYQDAWRVCHPD KRPFSSLEDACERLLPYHVVADYEAEEDDRILDS
Sbjct: 129  KVMRPGHQVELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDS 188

Query: 538  DTTGQMPSRSQQWDHNIAAKVAEFTATFEKQVLAFNIISRKRAMGEFRAEERLMVEQALL 717
            DTTGQMPSRSQQWDHNIAAKVAEFTATFEKQ LAFNIISRKRA+GEFR+EERLM+EQALL
Sbjct: 189  DTTGQMPSRSQQWDHNIAAKVAEFTATFEKQALAFNIISRKRAIGEFRSEERLMIEQALL 248

Query: 718  QEEKHMLLDIRAEMESMEKANRDAAEAKMRMXXXXXXXXXXXXXXXXXXMLARAPMRGNA 897
            QEEK  +L++R E+ES EKA R+A EAK+RM                  +LARAP+R +A
Sbjct: 249  QEEKRAMLELRTEIESREKAGREAHEAKLRMAAMVQAEQARAESQAHAELLARAPIRASA 308

Query: 898  AASQADGGSIDHHLGGQEHGVNMDEMMHEWG-NTNREEEEPSXXXXXXXXXXXXXXSDMQ 1074
               Q +   I H +  QE GVN DEMM+ WG NT R+E+EPS              + MQ
Sbjct: 309  LGPQGNDLPIGHDMAEQEQGVNPDEMMNGWGNNTQRDEKEPS-EDFLNDEETENGDAGMQ 367

Query: 1075 DEWRETGEFDLNTR 1116
            DEWRE GEFDLNTR
Sbjct: 368  DEWREVGEFDLNTR 381


>emb|CBI26439.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  328 bits (841), Expect = 2e-87
 Identities = 169/249 (67%), Positives = 189/249 (75%), Gaps = 1/249 (0%)
 Frame = +1

Query: 373  GNPVELEMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSDTTGQ 552
            G+ VEL+MAYQDAWRVCHPD KRPFSSLEDACERLLPYHVVADYEAEEDDRILDSDTTGQ
Sbjct: 4    GHQVELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSDTTGQ 63

Query: 553  MPSRSQQWDHNIAAKVAEFTATFEKQVLAFNIISRKRAMGEFRAEERLMVEQALLQEEKH 732
            MPSRSQQWDHNIAAKVAEFTATFEKQ LAFNIISRKRA+GEFR+EERLM+EQALLQEEK 
Sbjct: 64   MPSRSQQWDHNIAAKVAEFTATFEKQALAFNIISRKRAIGEFRSEERLMIEQALLQEEKR 123

Query: 733  MLLDIRAEMESMEKANRDAAEAKMRMXXXXXXXXXXXXXXXXXXMLARAPMRGNAAASQA 912
             +L++R E+ES EKA R+A EAK+RM                  +LARAP+R +A   Q 
Sbjct: 124  AMLELRTEIESREKAGREAHEAKLRMAAMVQAEQARAESQAHAELLARAPIRASALGPQG 183

Query: 913  DGGSIDHHLGGQEHGVNMDEMMHEWG-NTNREEEEPSXXXXXXXXXXXXXXSDMQDEWRE 1089
            +   I H +  QE GVN DEMM+ WG NT R+E+EPS              + MQDEWRE
Sbjct: 184  NDLPIGHDMAEQEQGVNPDEMMNGWGNNTQRDEKEPS-EDFLNDEETENGDAGMQDEWRE 242

Query: 1090 TGEFDLNTR 1116
             GEFDLNTR
Sbjct: 243  VGEFDLNTR 251


>gb|ABK95569.1| unknown [Populus trichocarpa]
          Length = 428

 Score =  314 bits (805), Expect = 3e-83
 Identities = 162/255 (63%), Positives = 189/255 (74%), Gaps = 1/255 (0%)
 Frame = +1

Query: 355  KANRGQGNPVELEMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRILD 534
            K  R Q N VE++MAYQDAWRVCHPD KRPF SLEDACERLLPYHVVADYEAEEDDRILD
Sbjct: 178  KGIRPQVNQVEIQMAYQDAWRVCHPDFKRPFGSLEDACERLLPYHVVADYEAEEDDRILD 237

Query: 535  SDTTGQMPSRSQQWDHNIAAKVAEFTATFEKQVLAFNIISRKRAMGEFRAEERLMVEQAL 714
             DTTGQMPSRSQQWDHNIAAKVAEFT TFEKQ LAFNII+RKR++GEFR+EERLM+EQAL
Sbjct: 238  LDTTGQMPSRSQQWDHNIAAKVAEFTGTFEKQALAFNIITRKRSLGEFRSEERLMIEQAL 297

Query: 715  LQEEKHMLLDIRAEMESMEKANRDAAEAKMRMXXXXXXXXXXXXXXXXXXMLARAPMRGN 894
            LQEEK +LL+++AEM++ EKA+R   EA++RM                  M++RAP+R +
Sbjct: 298  LQEEKRLLLNLKAEMDAREKASR---EAQLRMAAMFQAEQAQAESHAHAEMMSRAPIRAS 354

Query: 895  AAASQADGGSIDHHLGGQEHGVNMDEMMHEW-GNTNREEEEPSXXXXXXXXXXXXXXSDM 1071
            A  SQ +   I H +G QEHGVN DEMM+ W GN  R+E+EPS              + +
Sbjct: 355  ALGSQGNSVPIGHDMGEQEHGVNPDEMMNGWGGNAPRDEKEPSEDFLNDEETENGNTA-V 413

Query: 1072 QDEWRETGEFDLNTR 1116
              EWRE GEFDLNTR
Sbjct: 414  HSEWREVGEFDLNTR 428


>ref|XP_003540005.1| PREDICTED: uncharacterized protein LOC100813084 [Glycine max]
          Length = 368

 Score =  312 bits (800), Expect = 1e-82
 Identities = 172/319 (53%), Positives = 198/319 (62%), Gaps = 22/319 (6%)
 Frame = +1

Query: 226  AISRFPSNIDAHLRPLGXXXXXXXXXXXXXXXXXXXXXXXXXXKANRGQ----------- 372
            AISRFPSNIDAHLRP+                             N              
Sbjct: 52   AISRFPSNIDAHLRPIRPLNLQQNPNPSPNPAPNPNPNPLINLHQNPNSNHLPPPQQPSQ 111

Query: 373  ----------GNPVELEMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDD 522
                      GN +EL+MAYQDAWRVCHPD KRPFSSLEDACERLLPYHVVADYE EEDD
Sbjct: 112  QQQQQKIIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEEEEDD 171

Query: 523  RILDSDTTGQMPSRSQQWDHNIAAKVAEFTATFEKQVLAFNIISRKRAMGEFRAEERLMV 702
            RILDSDTTGQM SRSQQWD+NI AK+AEFTATFEKQ LAFNII++KR +GEFR+EERLM+
Sbjct: 172  RILDSDTTGQMLSRSQQWDNNITAKIAEFTATFEKQALAFNIITQKRGLGEFRSEERLMI 231

Query: 703  EQALLQEEKHMLLDIRAEMESMEKANRDAAEAKMRMXXXXXXXXXXXXXXXXXXMLARAP 882
            EQALLQEEK    ++RAE+ES EKA R+A EAK+RM                  M++R P
Sbjct: 232  EQALLQEEKRAFYELRAEIESREKAGREAHEAKLRMAAMFQAEQARADLQSHAEMMSRVP 291

Query: 883  MRGNAAASQADGGSIDHHLGGQEHGVNMDEMMHEWG-NTNREEEEPSXXXXXXXXXXXXX 1059
            MRG+A  SQ +   I H +G Q+ G N  EM++ WG NT R+E+EPS             
Sbjct: 292  MRGSALGSQGNDIVIGHDMGEQDQGGNPGEMINGWGNNTQRDEKEPSEDFLNDEAENGDI 351

Query: 1060 XSDMQDEWRETGEFDLNTR 1116
             +  QD WRE GEFDLN R
Sbjct: 352  GT--QDGWREVGEFDLNAR 368


>ref|XP_002524050.1| conserved hypothetical protein [Ricinus communis]
            gi|223536777|gb|EEF38418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 400

 Score =  309 bits (792), Expect = 9e-82
 Identities = 159/249 (63%), Positives = 182/249 (73%), Gaps = 2/249 (0%)
 Frame = +1

Query: 376  NPVELEMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSDTTGQM 555
            N VEL+MAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSDTTGQM
Sbjct: 156  NQVELQMAYQDAWRVCHPDIKRPFSSLEDACERLLPYHVVADYEAEEDDRILDSDTTGQM 215

Query: 556  PSRSQQWDHNIAAKVAEFTATFEKQVLAFNIISRKRAMGEFRAEERLMVEQALLQEEKHM 735
            PSRSQQWDHNIAAKVAEFT TFEKQ LAFNII+RKRA+GEFR+EERLM+EQ LLQEEK +
Sbjct: 216  PSRSQQWDHNIAAKVAEFTGTFEKQALAFNIITRKRALGEFRSEERLMIEQMLLQEEKRL 275

Query: 736  LLDIRAEMESMEKANRDAAEAKMRMXXXXXXXXXXXXXXXXXXMLARAPMRGNAAASQAD 915
            +L+++ EM++ EKA R   EA++RM                  M+ARAP+R +A  SQ +
Sbjct: 276  MLELKTEMDAREKAGR---EAQLRMAAMVQAEQARAESHAHAEMMARAPIRASALGSQGN 332

Query: 916  GGSIDHHLGGQEHGVNMDEMMHEWG--NTNREEEEPSXXXXXXXXXXXXXXSDMQDEWRE 1089
               I H +G QEH V  ++MM+ WG  N  R+E EPS                 Q EWRE
Sbjct: 333  NVPIGHDIGDQEHSVTPEQMMNGWGGNNAQRDEREPSEDFLNDEETENGDTGG-QGEWRE 391

Query: 1090 TGEFDLNTR 1116
             GEFDLNTR
Sbjct: 392  VGEFDLNTR 400


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