BLASTX nr result
ID: Coptis24_contig00002479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00002479
(1526 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|... 123 4e-73
ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago ... 162 5e-68
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 243 1e-61
ref|XP_003599577.1| hypothetical protein MTR_3g035650 [Medicago ... 175 3e-41
emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifo... 168 3e-39
>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
[Medicago truncatula]
Length = 501
Score = 123 bits (308), Expect(4) = 4e-73
Identities = 67/108 (62%), Positives = 74/108 (68%)
Frame = +1
Query: 634 GNNSWKRLLIPRRLRSKRRNPPEEGLASD*LVGEAIAYQGDDQ*LVREDDQPHWD*DTAQ 813
GNNSWKRLLIPR+LRS+RRNPP++GLA Q
Sbjct: 85 GNNSWKRLLIPRKLRSERRNPPKDGLA--------------------------------Q 112
Query: 814 TPTGGSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRSNDGIWGISI 957
TPTGGSSGEFSAMGESLTEQCRVEV+GLRV+NFFS RR+NDGI GISI
Sbjct: 113 TPTGGSSGEFSAMGESLTEQCRVEVKGLRVMNFFSWRRNNDGIRGISI 160
Score = 114 bits (285), Expect(4) = 4e-73
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +3
Query: 1050 VRRQIPGLNPGQAVETAKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 1220
VRRQIPGLNPGQ V+T KLEYGRGRGNFRWSGEMRRDRKEHQ RKHSAGPTLTLRDE
Sbjct: 161 VRRQIPGLNPGQVVKTTKLEYGRGRGNFRWSGEMRRDRKEHQWRKHSAGPTLTLRDE 217
Score = 54.7 bits (130), Expect(4) = 4e-73
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 1328 VSRLGSTFARMKLKGIDGGPHKRWSM 1405
+SRLGSTFARMKLKGIDGGPHKRW +
Sbjct: 218 ISRLGSTFARMKLKGIDGGPHKRWRL 243
Score = 53.1 bits (126), Expect(4) = 4e-73
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1
Query: 1444 LDMSRILLKERGAFGNADTGGAWLSSA 1524
LDM RILLKER AFGNADTGGAWLSSA
Sbjct: 243 LDMPRILLKERSAFGNADTGGAWLSSA 269
Score = 68.2 bits (165), Expect = 6e-09
Identities = 44/80 (55%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Frame = +3
Query: 480 EAISNATMNLMESSILAQDERWRHA*HMQVGREVVFPVADG*VTRKNLP--LGGEQQ--- 644
EAISN T NLMES ILAQDERWRHA HMQV REVVFPV + R +P L E++
Sbjct: 47 EAISNVTRNLMESLILAQDERWRHALHMQVEREVVFPVGNNSWKRLLIPRKLRSERRNPP 106
Query: 645 LETAANTP*AEEQKEESARG 704
+ A TP E SA G
Sbjct: 107 KDGLAQTPTGGSSGEFSAMG 126
>ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago truncatula]
gi|355521959|gb|AET02413.1| hypothetical protein
MTR_8g040260 [Medicago truncatula]
Length = 241
Score = 162 bits (409), Expect(2) = 5e-68
Identities = 81/108 (75%), Positives = 83/108 (76%)
Frame = -2
Query: 856 RPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCS 677
RP HC + S V DHPLGP TDH LGKLLPHQLANQTRAPP ADSSF S
Sbjct: 134 RPFTSTRHCSIRLSRIAENSSLVDDHPLGPTTDHHLGKLLPHQLANQTRAPPWADSSFRS 193
Query: 676 SAYGVLAAVSSCCSPPKGRFLRVTHPSATGNTTSRPTCMC*ACRQRSS 533
SAYGVLA VSSCCSPPKG+FLRVTHPSATGNTTSR CMC ACRQRSS
Sbjct: 194 SAYGVLATVSSCCSPPKGKFLRVTHPSATGNTTSRSICMCKACRQRSS 241
Score = 124 bits (311), Expect(2) = 5e-68
Identities = 70/106 (66%), Positives = 73/106 (68%)
Frame = -3
Query: 1278 YPSFTARTTGVSNPIRSPSFRLXXXXXXXXXAFAVGVLSDLCAFHRSTGNSLCPYRTPAW 1099
YPSFTARTT VSNPIRSPSFRL AFA+GV SDL AFH STGNSL
Sbjct: 38 YPSFTARTTRVSNPIRSPSFRLSVLVSAQQSAFAIGVPSDLYAFHHSTGNSL-------- 89
Query: 1098 QFPPPVQG*ALGFDGGLEKPPTDALRPIIPDNACILCLTAAAGTEL 961
+L FDG L+KPPTDALRPII DNACILCLTAAAGTEL
Sbjct: 90 ---------SLRFDGELKKPPTDALRPIISDNACILCLTAAAGTEL 126
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = -1
Query: 1526 RADDSHAPPVSAFPKAPLSFKRIRDMSSPGKVLRFASN*TTCSTACAGP 1380
RADD+HAPPVS FPKA LSFKRI MSSPGKVLRF + T +T + P
Sbjct: 3 RADDNHAPPVSVFPKALLSFKRIHGMSSPGKVLRFYPSFTARTTRVSNP 51
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 243 bits (620), Expect = 1e-61
Identities = 122/127 (96%), Positives = 123/127 (96%)
Frame = -1
Query: 1343 SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF 1164
SPGGILNALATALHGS RT PSIHRLRLGLLG LIPFAPLAFVSQCQCRPSRVLSPLVFF
Sbjct: 3 SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62
Query: 1163 PISAHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 984
PIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL
Sbjct: 63 PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122
Query: 983 PRLLAQS 963
PRLLAQ+
Sbjct: 123 PRLLAQN 129
Score = 120 bits (301), Expect(2) = 6e-25
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = -1
Query: 620 VLTRYSPVRHWKHHFPSDLHVLSMPPAFILSQDRTLHEIHSCITYSFLVRRQSRFRIVFH 441
VLTRYSPVRHWKHHFP DLHVLSMPPAFILSQD+TLHEIHSCITYSFL+RRQS F IVF
Sbjct: 194 VLTRYSPVRHWKHHFPFDLHVLSMPPAFILSQDQTLHEIHSCITYSFLIRRQSGFGIVFP 253
Query: 440 SK 435
SK
Sbjct: 254 SK 255
Score = 21.6 bits (44), Expect(2) = 6e-25
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 445 FIPRHNLYPCAS 410
F + NLYPCAS
Sbjct: 252 FPSKDNLYPCAS 263
Score = 119 bits (297), Expect = 3e-24
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = -3
Query: 975 AGTELADAYSPDTVIASSPGKEVHDPQAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSV 796
A + L + +TVI SSP KEV DP AF+LHAALLRQAFAHCGKFPTAASRRSLGRVSV
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSV 177
Query: 795 PVWLIILSDQLLIIALV 745
PVWLIILSDQLLIIALV
Sbjct: 178 PVWLIILSDQLLIIALV 194
>ref|XP_003599577.1| hypothetical protein MTR_3g035650 [Medicago truncatula]
gi|355488625|gb|AES69828.1| hypothetical protein
MTR_3g035650 [Medicago truncatula]
Length = 128
Score = 175 bits (444), Expect = 3e-41
Identities = 88/108 (81%), Positives = 89/108 (82%)
Frame = -2
Query: 856 RPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCS 677
RP HC + SP VADHPLGPATDHRLGKLLPHQLANQTRAPP ADSSF S
Sbjct: 21 RPFTSTRHCSVRLSPIAENSPLVADHPLGPATDHRLGKLLPHQLANQTRAPPWADSSFRS 80
Query: 676 SAYGVLAAVSSCCSPPKGRFLRVTHPSATGNTTSRPTCMC*ACRQRSS 533
SAYGVLAAVSSCCSPPKGRFLRVTHPSATGNTTSR TCMC ACRQRSS
Sbjct: 81 SAYGVLAAVSSCCSPPKGRFLRVTHPSATGNTTSRSTCMCKACRQRSS 128
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = -1
Query: 956 MLIPQIPSLLLLREKKFTTRRPSTSTRHCSVRLSPIAENSPLL 828
MLIP+IPSL LL+EKKF TRRP TSTRHCSVRLSPIAENSPL+
Sbjct: 1 MLIPRIPSLFLLQEKKFMTRRPFTSTRHCSVRLSPIAENSPLV 43
>emb|CAK18872.1| hypothetical protein precursor [Phillyrea latifolia]
Length = 84
Score = 168 bits (426), Expect = 3e-39
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = -1
Query: 1346 YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 1167
YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF
Sbjct: 2 YSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVF 61
Query: 1166 FPISAHFTAPPEIPSAPTVLQLG 1098
FPIS HFTAPPEIPSAPTVLQLG
Sbjct: 62 FPISTHFTAPPEIPSAPTVLQLG 84