BLASTX nr result

ID: Coptis24_contig00002475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002475
         (1876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316930.1| predicted protein [Populus trichocarpa] gi|1...   761   0.0  
ref|XP_003630233.1| hypothetical protein MTR_8g093250 [Medicago ...   749   0.0  
ref|XP_002533709.1| conserved hypothetical protein [Ricinus comm...   719   0.0  
ref|XP_004150102.1| PREDICTED: uncharacterized protein YnbB-like...   713   0.0  
ref|XP_003634652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   672   0.0  

>ref|XP_002316930.1| predicted protein [Populus trichocarpa] gi|118486085|gb|ABK94886.1|
            unknown [Populus trichocarpa] gi|222859995|gb|EEE97542.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  761 bits (1965), Expect = 0.0
 Identities = 376/450 (83%), Positives = 407/450 (90%), Gaps = 1/450 (0%)
 Frame = +1

Query: 16   MWVLSCATP-AYPTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPEVTEAVDALCSEFR 192
            MW LSCATP AYP + +  + P   +   S SQ+S   H+ +PFVPEV +AVD+L SEFR
Sbjct: 3    MWTLSCATPVAYPANSVRVSMPS--VKVPSSSQISFQ-HNESPFVPEVVKAVDSLHSEFR 59

Query: 193  AVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAESAIVR 372
            AVDNLVACNTSRVLKAF NA+L SHHF+G TGYGHDE GGREALD AFAEIVGAESA+VR
Sbjct: 60   AVDNLVACNTSRVLKAFQNARLGSHHFSGSTGYGHDEAGGREALDQAFAEIVGAESALVR 119

Query: 373  AQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDSHGLGSLKEFGVSYREV 552
            +QFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIG RDS+GLGSLK+FGV YREV
Sbjct: 120  SQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGKRDSNGLGSLKDFGVEYREV 179

Query: 553  PLAEDGGLDWDALTVALKPQTKCALIQRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVM 732
            PLAEDGGLDWD L  ALKP TKCALIQRSCGYSWRQSLSVNEIGRAIK+IKMQNP CLVM
Sbjct: 180  PLAEDGGLDWDCLMRALKPHTKCALIQRSCGYSWRQSLSVNEIGRAIKMIKMQNPNCLVM 239

Query: 733  VDNCYGEFVESMEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGL 912
            VDNCYGEFVES+EPP VGADLIAGSLIKNPGGTIAPCGGY+AG++ WV+AAAARLSAPGL
Sbjct: 240  VDNCYGEFVESIEPPAVGADLIAGSLIKNPGGTIAPCGGYIAGKKKWVEAAAARLSAPGL 299

Query: 913  GTDCGSIPGDIMRTYFQGLFLAPQMVGEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQ 1092
            G DCGS PGD+MR YFQGLFL+PQMVGEAIKG++LIAEVMASKGYKVQPLPRV RHDTVQ
Sbjct: 300  GIDCGSTPGDVMRAYFQGLFLSPQMVGEAIKGAFLIAEVMASKGYKVQPLPRVTRHDTVQ 359

Query: 1093 AVQLGNRERLLAFCEAVQRRSPVGSFIKPVAGSSPGYASEVIFADGTFIDGSTSELSCDG 1272
            AVQLG+RE LLAFCEAVQR SPV S+ KPVAGS+PGYASEVIFADGTFIDGSTSELSCDG
Sbjct: 360  AVQLGSRELLLAFCEAVQRSSPVASYTKPVAGSTPGYASEVIFADGTFIDGSTSELSCDG 419

Query: 1273 PLREPFSVFCQGGTHWTQWGLVLGEVLRSI 1362
            PLREPF+V+CQGGTHWTQWGLVLGEVL+ I
Sbjct: 420  PLREPFAVYCQGGTHWTQWGLVLGEVLKHI 449


>ref|XP_003630233.1| hypothetical protein MTR_8g093250 [Medicago truncatula]
            gi|355524255|gb|AET04709.1| hypothetical protein
            MTR_8g093250 [Medicago truncatula]
          Length = 448

 Score =  749 bits (1934), Expect = 0.0
 Identities = 372/449 (82%), Positives = 405/449 (90%)
 Frame = +1

Query: 16   MWVLSCATPAYPTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPEVTEAVDALCSEFRA 195
            M  ++CA  AYPTH +  + P      Y+ S+ S+PI   NPFVPEV EAVD+L SEFRA
Sbjct: 1    MLSITCAFSAYPTHPVRISIPTTSTIRYA-SRFSVPI---NPFVPEVIEAVDSLNSEFRA 56

Query: 196  VDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAESAIVRA 375
            VDNLVA NT+RVLKAFHNA+L SHHF GCTGYGHDE GGREALD AFAEIVGAESAIVR+
Sbjct: 57   VDNLVAYNTTRVLKAFHNARLGSHHFGGCTGYGHDETGGREALDQAFAEIVGAESAIVRS 116

Query: 376  QFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDSHGLGSLKEFGVSYREVP 555
            QFFSGTHAITCALFA LRPGDELLAVAGAPYDTLEEVIG RDS GLGSL++FGV YREVP
Sbjct: 117  QFFSGTHAITCALFALLRPGDELLAVAGAPYDTLEEVIGKRDSGGLGSLQDFGVKYREVP 176

Query: 556  LAEDGGLDWDALTVALKPQTKCALIQRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVMV 735
            LAEDGGLDW+ L  A+KP+TKCALIQRSCGYSWRQSLSVN+IGRAIKIIKMQNP C VMV
Sbjct: 177  LAEDGGLDWNELMHAVKPETKCALIQRSCGYSWRQSLSVNDIGRAIKIIKMQNPECSVMV 236

Query: 736  DNCYGEFVESMEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGLG 915
            DNCYGE VES+EPPMVGADL+AGSLIKNPGGTIAPCGGYVAG++  V+AAAARLSAPGLG
Sbjct: 237  DNCYGELVESIEPPMVGADLMAGSLIKNPGGTIAPCGGYVAGKKKLVEAAAARLSAPGLG 296

Query: 916  TDCGSIPGDIMRTYFQGLFLAPQMVGEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQA 1095
             DCGS PGDIMR +FQGLFL+PQMVGEAIKGS+LIAEV+ASKGYKVQPLPRVPR DTVQA
Sbjct: 297  VDCGSTPGDIMRAFFQGLFLSPQMVGEAIKGSFLIAEVLASKGYKVQPLPRVPRCDTVQA 356

Query: 1096 VQLGNRERLLAFCEAVQRRSPVGSFIKPVAGSSPGYASEVIFADGTFIDGSTSELSCDGP 1275
            VQLG+RERLLAFCEAVQR SPVGS+ KP+AG++PGYASEVIFADGTFIDGSTSELSCDGP
Sbjct: 357  VQLGSRERLLAFCEAVQRSSPVGSYTKPIAGTTPGYASEVIFADGTFIDGSTSELSCDGP 416

Query: 1276 LREPFSVFCQGGTHWTQWGLVLGEVLRSI 1362
            LREPF+VFCQGGTHWTQWGLVLGEVL+SI
Sbjct: 417  LREPFAVFCQGGTHWTQWGLVLGEVLKSI 445


>ref|XP_002533709.1| conserved hypothetical protein [Ricinus communis]
            gi|223526383|gb|EEF28672.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 500

 Score =  719 bits (1857), Expect = 0.0
 Identities = 364/449 (81%), Positives = 388/449 (86%), Gaps = 19/449 (4%)
 Frame = +1

Query: 16   MWVLSCATP-AYPTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPE------------- 153
            MWVLS ATP AYP H L  + P     T+S SQ+S   H  NPFVPE             
Sbjct: 3    MWVLSSATPSAYPAHSLKVSMP-----THSSSQVSFH-HLDNPFVPELNLDMANMKTFSS 56

Query: 154  -----VTEAVDALCSEFRAVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGRE 318
                 V +A+D+L +EFRAVDNLVACNTSRVLKAF NA++ SHHF G TGYGHDE GGRE
Sbjct: 57   GWEKQVAKALDSLYTEFRAVDNLVACNTSRVLKAFQNARVGSHHFGGSTGYGHDEAGGRE 116

Query: 319  ALDGAFAEIVGAESAIVRAQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIR 498
            ALD AFAEIVGAESAIVR+QFFSGTHAITC LFAFLRPGDELLAVAG PYDTLEEVIG R
Sbjct: 117  ALDQAFAEIVGAESAIVRSQFFSGTHAITCGLFAFLRPGDELLAVAGPPYDTLEEVIGKR 176

Query: 499  DSHGLGSLKEFGVSYREVPLAEDGGLDWDALTVALKPQTKCALIQRSCGYSWRQSLSVNE 678
            DSHGLGSLK+FGV YREVPLAEDGGLDWDAL  ALKP TKCALIQRSCGYSWR+SLSVNE
Sbjct: 177  DSHGLGSLKDFGVKYREVPLAEDGGLDWDALLTALKPDTKCALIQRSCGYSWRRSLSVNE 236

Query: 679  IGRAIKIIKMQNPYCLVMVDNCYGEFVESMEPPMVGADLIAGSLIKNPGGTIAPCGGYVA 858
            IGRAIKIIKMQNP CLVMVDNCYGEFVE +EPPMVGADLIAGSLIKNPGGTIAPCGGYVA
Sbjct: 237  IGRAIKIIKMQNPNCLVMVDNCYGEFVEQIEPPMVGADLIAGSLIKNPGGTIAPCGGYVA 296

Query: 859  GRENWVKAAAARLSAPGLGTDCGSIPGDIMRTYFQGLFLAPQMVGEAIKGSYLIAEVMAS 1038
            GR+ WV+AAAARLSAPGLG DCGS PGDIMRTYFQGLFL+PQMVGEAIKG++LIAEVMAS
Sbjct: 297  GRKKWVEAAAARLSAPGLGIDCGSTPGDIMRTYFQGLFLSPQMVGEAIKGTFLIAEVMAS 356

Query: 1039 KGYKVQPLPRVPRHDTVQAVQLGNRERLLAFCEAVQRRSPVGSFIKPVAGSSPGYASEVI 1218
            KGYKVQPLPR+ RHDTVQ VQLG+RERL+AFCEAVQR SPV SF KPVAG++PGYASEVI
Sbjct: 357  KGYKVQPLPRLTRHDTVQVVQLGSRERLIAFCEAVQRSSPVSSFTKPVAGATPGYASEVI 416

Query: 1219 FADGTFIDGSTSELSCDGPLREPFSVFCQ 1305
            FADGTFIDGSTSELSCDGPLREPF+VFCQ
Sbjct: 417  FADGTFIDGSTSELSCDGPLREPFAVFCQ 445


>ref|XP_004150102.1| PREDICTED: uncharacterized protein YnbB-like [Cucumis sativus]
          Length = 454

 Score =  713 bits (1840), Expect = 0.0
 Identities = 353/454 (77%), Positives = 389/454 (85%), Gaps = 5/454 (1%)
 Frame = +1

Query: 16   MWVLSCATPAYPTHILPTTTPKPFLSTYSHSQLSIPIH-----SHNPFVPEVTEAVDALC 180
            MW LS +  ++P+     +   P  +  S + L +  H     S  PF PEV  AVD+L 
Sbjct: 1    MWGLSFSILSHPSPNFTASLLVPAATLRSRTSLPLNFHPKPYTSDTPFSPEVVRAVDSLQ 60

Query: 181  SEFRAVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAES 360
             EFRAVD+LVA N+++VLKAF N +L SHHF G TGYGHDE GGREALD AFAEIVGAES
Sbjct: 61   YEFRAVDDLVARNSAKVLKAFQNVRLGSHHFGGSTGYGHDEAGGREALDNAFAEIVGAES 120

Query: 361  AIVRAQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDSHGLGSLKEFGVS 540
            A+VR+QFFSGTHAITCALFA LRPGDELLAVAGAPYDTLEEVIG RDS GLGSLK+FGV 
Sbjct: 121  AMVRSQFFSGTHAITCALFALLRPGDELLAVAGAPYDTLEEVIGKRDSQGLGSLKDFGVE 180

Query: 541  YREVPLAEDGGLDWDALTVALKPQTKCALIQRSCGYSWRQSLSVNEIGRAIKIIKMQNPY 720
            YREVPLAEDGGLDW+ L  ALKPQTKCALIQRSCGYSWR+SLSV+EIG+AI++IKMQNP 
Sbjct: 181  YREVPLAEDGGLDWEELARALKPQTKCALIQRSCGYSWRRSLSVDEIGKAIRLIKMQNPD 240

Query: 721  CLVMVDNCYGEFVESMEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGRENWVKAAAARLS 900
            CLVMVDNCYGEFVE+ EPP VGADLIAGSLIKNPGGT+APCGGY+AGR  WVKAAAARLS
Sbjct: 241  CLVMVDNCYGEFVETTEPPTVGADLIAGSLIKNPGGTLAPCGGYIAGRAKWVKAAAARLS 300

Query: 901  APGLGTDCGSIPGDIMRTYFQGLFLAPQMVGEAIKGSYLIAEVMASKGYKVQPLPRVPRH 1080
            APGLG D GS PGDIMRT+FQGLFL+PQMVGEA+KG  LIAEVM SKGYKVQPLPR PRH
Sbjct: 301  APGLGVDSGSTPGDIMRTFFQGLFLSPQMVGEAVKGMILIAEVMQSKGYKVQPLPRAPRH 360

Query: 1081 DTVQAVQLGNRERLLAFCEAVQRRSPVGSFIKPVAGSSPGYASEVIFADGTFIDGSTSEL 1260
            DTVQAVQLG+RE LLAFCEAVQR SPV SF KPV G++PGYASEVIFADGTFIDGSTSEL
Sbjct: 361  DTVQAVQLGSREVLLAFCEAVQRSSPVASFTKPVPGTTPGYASEVIFADGTFIDGSTSEL 420

Query: 1261 SCDGPLREPFSVFCQGGTHWTQWGLVLGEVLRSI 1362
            SCDGPLREPF+VFCQGG+HWTQWGLVLGEVL+S+
Sbjct: 421  SCDGPLREPFAVFCQGGSHWTQWGLVLGEVLKSL 454


>ref|XP_003634652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein ynbB-like
            [Vitis vinifera]
          Length = 437

 Score =  672 bits (1734), Expect = 0.0
 Identities = 343/451 (76%), Positives = 379/451 (84%), Gaps = 3/451 (0%)
 Frame = +1

Query: 16   MWVLSCATPAY--PTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPEVTEAVDALCSEF 189
            M ++S ATPAY  P    P  T KP  + +S                +V +AVD+L SEF
Sbjct: 1    MMMVSYATPAYRVPIPAYPAHTLKPTRAIFSL---------------QVVKAVDSLYSEF 45

Query: 190  RAVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAESAIV 369
            RAVDNLVA NT+RVLKA+ NA++  HHF G TGYGH+E  GREALD AFAEI GAESAI 
Sbjct: 46   RAVDNLVARNTARVLKAYQNARVGYHHFGGSTGYGHEETRGREALDKAFAEIFGAESAIF 105

Query: 370  RAQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDSHGLGSLKEFGVS-YR 546
            R+Q FSGTHAITCALFAF RPG++LLAVAG P+DTLEEVIGIRDSHGLGSLK+FGV+ YR
Sbjct: 106  RSQVFSGTHAITCALFAFQRPGNQLLAVAGGPHDTLEEVIGIRDSHGLGSLKDFGVNTYR 165

Query: 547  EVPLAEDGGLDWDALTVALKPQTKCALIQRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCL 726
            EVPLAEDGGLDWDAL  ALKPQTKCALIQRSC YSW +SLS++E  RAIK+IKMQNP CL
Sbjct: 166  EVPLAEDGGLDWDALMGALKPQTKCALIQRSCRYSWCRSLSIDETARAIKMIKMQNPNCL 225

Query: 727  VMVDNCYGEFVESMEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGRENWVKAAAARLSAP 906
            VMVDNCYGEF E++EPPMVGADLIAGSLIKN GGTIAPCGGYVAG+E WVKAAAARLSAP
Sbjct: 226  VMVDNCYGEFSENVEPPMVGADLIAGSLIKNHGGTIAPCGGYVAGKEKWVKAAAARLSAP 285

Query: 907  GLGTDCGSIPGDIMRTYFQGLFLAPQMVGEAIKGSYLIAEVMASKGYKVQPLPRVPRHDT 1086
            GLG DCGS PGDIM+T+FQGLFL+ QMVGEAIKG +LIAEVMASKG+KVQP PRVPRHDT
Sbjct: 286  GLGMDCGSTPGDIMQTFFQGLFLSHQMVGEAIKGGFLIAEVMASKGFKVQPPPRVPRHDT 345

Query: 1087 VQAVQLGNRERLLAFCEAVQRRSPVGSFIKPVAGSSPGYASEVIFADGTFIDGSTSELSC 1266
            VQAVQLG RE LLAFCEAVQR SPVGSF +PV GS+PGYASEVI AD TFIDGS SELSC
Sbjct: 346  VQAVQLGTRECLLAFCEAVQRSSPVGSFTRPVVGSTPGYASEVILADRTFIDGSISELSC 405

Query: 1267 DGPLREPFSVFCQGGTHWTQWGLVLGEVLRS 1359
            DG LREPF++FCQGG+HWTQW LVLGEVL+S
Sbjct: 406  DGLLREPFAMFCQGGSHWTQWRLVLGEVLKS 436


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