BLASTX nr result

ID: Coptis24_contig00002468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002468
         (1669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264460.1| PREDICTED: probable cardiolipin synthase 1 [...   290   8e-76
ref|XP_004134756.1| PREDICTED: cardiolipin synthase-like [Cucumi...   286   9e-75
ref|XP_002518507.1| cdp-diacylglycerol--glycerol-3-phosphate 3-p...   281   4e-73
ref|XP_002305589.1| predicted protein [Populus trichocarpa] gi|2...   265   4e-68
ref|XP_002874816.1| predicted protein [Arabidopsis lyrata subsp....   259   1e-66

>ref|XP_002264460.1| PREDICTED: probable cardiolipin synthase 1 [Vitis vinifera]
            gi|302144088|emb|CBI23193.3| unnamed protein product
            [Vitis vinifera]
          Length = 348

 Score =  290 bits (742), Expect = 8e-76
 Identities = 158/272 (58%), Positives = 182/272 (66%), Gaps = 11/272 (4%)
 Frame = +1

Query: 481  WQLLQCTTPLYLQGEGNVVLRRLTGTKVDL---------GFGSLSLVNGFDDQT--KESL 627
            W+L Q  TPL LQG+  VVLR +   K+           GFGS+S   G   +   K+ +
Sbjct: 76   WKLSQSATPLLLQGD--VVLRNVEALKLLRNRSFPIRLGGFGSVSAGTGLLGRLDKKQLI 133

Query: 628  RNXXXXXXXXXXEIFFNLPNSISMSRLISGPFIGWMIMNEWYLSAFIGLAVSGATDWLDG 807
                        + F NLPN IS SRL SGP + WMI+NEWYLSAF+GLA+SGATDWLDG
Sbjct: 134  SGDVGVAYGDFVKSFMNLPNLISFSRLASGPLLAWMILNEWYLSAFVGLAISGATDWLDG 193

Query: 808  YVARRMGINSVIGSYLDPLADKVLIVSVAIAMVKKGLLQPWXXXXXXXXXXXXISGAVYQ 987
            Y+AR+MGINSVIGSYLDPLADKVLI  VA+AMV K LL P             I GAVY+
Sbjct: 194  YMARKMGINSVIGSYLDPLADKVLIGCVALAMVDKDLLHPGLVGLVVLRDVALIGGAVYK 253

Query: 988  RANSLDWEWKSWSEFTNLDGTRARKVEPLFLSKVNTVFQXXXXXXXXXQPEFGTDETQVY 1167
            RA+SL WEWKSW +F NLDGT  +KVEPLF+SKVNTV Q         QPEFGT ET+ Y
Sbjct: 254  RASSLGWEWKSWFDFFNLDGTHPQKVEPLFISKVNTVLQLALVTAALLQPEFGTQETESY 313

Query: 1168 ITYLSWLVASTTVASTVAYGAQQMRSGSTLVA 1263
            ITYLSWLVASTTVAST AYGAQ MR+ S L+A
Sbjct: 314  ITYLSWLVASTTVASTAAYGAQHMRNRSKLIA 345


>ref|XP_004134756.1| PREDICTED: cardiolipin synthase-like [Cucumis sativus]
            gi|449479437|ref|XP_004155599.1| PREDICTED: cardiolipin
            synthase-like [Cucumis sativus]
          Length = 343

 Score =  286 bits (733), Expect = 9e-75
 Identities = 155/275 (56%), Positives = 183/275 (66%), Gaps = 12/275 (4%)
 Frame = +1

Query: 481  WQLLQCTTPLYLQGEGNVVLRR----------LTGTKVDL--GFGSLSLVNGFDDQTKES 624
            W+L Q  TPLY+QG G ++LRR          L  TK+ L   FGS+S      D+    
Sbjct: 75   WKLSQSATPLYVQGNG-IILRRVEAFNSRLNLLRRTKLPLRINFGSVSPPPHLLDRLNSE 133

Query: 625  LRNXXXXXXXXXXEIFFNLPNSISMSRLISGPFIGWMIMNEWYLSAFIGLAVSGATDWLD 804
              N            F NLPN IS+SRLISGPF+GWMI N WY SA +GLA+SGATDWLD
Sbjct: 134  KINDNWVHG------FVNLPNLISLSRLISGPFLGWMISNGWYSSAMVGLAISGATDWLD 187

Query: 805  GYVARRMGINSVIGSYLDPLADKVLIVSVAIAMVKKGLLQPWXXXXXXXXXXXXISGAVY 984
            GY AR+MGINSV+GSYLDPLADKVLI  VA+AMV+  LL P             +SGAVY
Sbjct: 188  GYTARKMGINSVVGSYLDPLADKVLIGCVALAMVQNDLLHPGLVALVVGRDVLLVSGAVY 247

Query: 985  QRANSLDWEWKSWSEFTNLDGTRARKVEPLFLSKVNTVFQXXXXXXXXXQPEFGTDETQV 1164
            QRANSL W+W+SW +F NLDGT  +KVEPLF+SKVNTVFQ         QPEFGT ET++
Sbjct: 248  QRANSLGWKWRSWDDFFNLDGTSPQKVEPLFISKVNTVFQLVLVAGALLQPEFGTQETEL 307

Query: 1165 YITYLSWLVASTTVASTVAYGAQQMRSGSTLVAKQ 1269
            Y+T LSWLV STTVAST AYGAQ M+  S L+A++
Sbjct: 308  YVTLLSWLVVSTTVASTAAYGAQFMKKSSGLIARK 342


>ref|XP_002518507.1| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase,
            putative [Ricinus communis] gi|223542352|gb|EEF43894.1|
            cdp-diacylglycerol--glycerol-3-phosphate
            3-phosphatidyltransferase, putative [Ricinus communis]
          Length = 334

 Score =  281 bits (719), Expect = 4e-73
 Identities = 146/268 (54%), Positives = 182/268 (67%), Gaps = 5/268 (1%)
 Frame = +1

Query: 481  WQLLQCTTPLYLQGEGNVVLRR-----LTGTKVDLGFGSLSLVNGFDDQTKESLRNXXXX 645
            W+LLQ T PLYL+G+  VVL++     L  ++V  G  +  +V+   ++ KE+       
Sbjct: 72   WKLLQSTNPLYLRGKNVVVLKKVEALNLLRSRVGPGLINQRVVDSVQEELKEA------H 125

Query: 646  XXXXXXEIFFNLPNSISMSRLISGPFIGWMIMNEWYLSAFIGLAVSGATDWLDGYVARRM 825
                  + F NLPN +S +RL+SGP IGWMI NE Y SAF+GLA+SGATDWLDG++AR+M
Sbjct: 126  LDEGLWKSFINLPNFVSFTRLVSGPVIGWMITNEMYSSAFVGLAISGATDWLDGFIARKM 185

Query: 826  GINSVIGSYLDPLADKVLIVSVAIAMVKKGLLQPWXXXXXXXXXXXXISGAVYQRANSLD 1005
             INSV+GSYLDPLADKVLI SVA+AMV   LL P             + GA+Y RANSL 
Sbjct: 186  RINSVVGSYLDPLADKVLIGSVALAMVHMDLLHPGLVGLVVLRDIALVGGAIYHRANSLG 245

Query: 1006 WEWKSWSEFTNLDGTRARKVEPLFLSKVNTVFQXXXXXXXXXQPEFGTDETQVYITYLSW 1185
            W+W SW +F NLDGTR  KVEPLF+SKVNTVFQ         QPEFGT+ETQ YITYLSW
Sbjct: 246  WKWNSWYDFFNLDGTRPEKVEPLFISKVNTVFQLVLVAAALLQPEFGTEETQSYITYLSW 305

Query: 1186 LVASTTVASTVAYGAQQMRSGSTLVAKQ 1269
            LVA+TTVAST  YG Q M++  +L+A +
Sbjct: 306  LVATTTVASTAGYGVQYMKNRYSLLASK 333


>ref|XP_002305589.1| predicted protein [Populus trichocarpa] gi|222848553|gb|EEE86100.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  265 bits (676), Expect = 4e-68
 Identities = 145/269 (53%), Positives = 174/269 (64%), Gaps = 7/269 (2%)
 Frame = +1

Query: 481  WQLLQCTTPLYLQGEGNVVLRR-------LTGTKVDLGFGSLSLVNGFDDQTKESLRNXX 639
            W+LLQ + PLYL+G   +VLR+       L  ++V  G+    +++   D  KE      
Sbjct: 75   WKLLQSSAPLYLRGNA-IVLRKVEAFNLHLLKSRVGSGYVGQGVLSDRVDLVKEE-EVDD 132

Query: 640  XXXXXXXXEIFFNLPNSISMSRLISGPFIGWMIMNEWYLSAFIGLAVSGATDWLDGYVAR 819
                    E F NLPN IS+SRL+SGP IGWMI N+ Y SAF+ LA++GA+DWLDGYVAR
Sbjct: 133  GGDKDGILESFVNLPNFISISRLVSGPLIGWMITNDMYSSAFVALAIAGASDWLDGYVAR 192

Query: 820  RMGINSVIGSYLDPLADKVLIVSVAIAMVKKGLLQPWXXXXXXXXXXXXISGAVYQRANS 999
            +M I+SV+GSYLDPLADKVLI SVA+AMV   LL P             + GAVY RA+S
Sbjct: 193  KMRIDSVVGSYLDPLADKVLIGSVALAMVHMDLLHPGLVGLVVLRDVALVCGAVYHRASS 252

Query: 1000 LDWEWKSWSEFTNLDGTRARKVEPLFLSKVNTVFQXXXXXXXXXQPEFGTDETQVYITYL 1179
            L W+W SW +F NLDGTR  KVEPLF+SKVNTVFQ         QPEFGT ET  YITYL
Sbjct: 253  LGWKWTSWYDFFNLDGTRPEKVEPLFISKVNTVFQLVLVAAALIQPEFGTQETLPYITYL 312

Query: 1180 SWLVASTTVASTVAYGAQQMRSGSTLVAK 1266
            SWLVA TTVAST AYGA+ M   + L  K
Sbjct: 313  SWLVAGTTVASTAAYGAKYMNRPALLARK 341


>ref|XP_002874816.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320653|gb|EFH51075.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score =  259 bits (663), Expect = 1e-66
 Identities = 142/261 (54%), Positives = 170/261 (65%), Gaps = 10/261 (3%)
 Frame = +1

Query: 481  WQLLQCTTPLYLQGEG---------NVVLRRLTG-TKVDLGFGSLSLVNGFDDQTKESLR 630
            W+LLQ  TPL+ +G G         N+ L R+   T+     G  S+V   D       R
Sbjct: 74   WKLLQSATPLHWRGNGAILKKVEALNLRLDRIRSRTRFPRHLGLQSVVPTVD-------R 126

Query: 631  NXXXXXXXXXXEIFFNLPNSISMSRLISGPFIGWMIMNEWYLSAFIGLAVSGATDWLDGY 810
            N          + F N+PN ISM+RL+SGP + WMI NE Y SAF+GLAVSGA+DWLDGY
Sbjct: 127  NDSKEEDGGILKSFVNVPNLISMARLVSGPALWWMISNEMYTSAFVGLAVSGASDWLDGY 186

Query: 811  VARRMGINSVIGSYLDPLADKVLIVSVAIAMVKKGLLQPWXXXXXXXXXXXXISGAVYQR 990
            VARRM INSV+GSYLDPLADKVLI  VA+AMV+K LL P             + GAVY R
Sbjct: 187  VARRMKINSVVGSYLDPLADKVLIGCVAVAMVQKDLLHPGLVGIVLLRDVALVGGAVYLR 246

Query: 991  ANSLDWEWKSWSEFTNLDGTRARKVEPLFLSKVNTVFQXXXXXXXXXQPEFGTDETQVYI 1170
            A +LDW+WK+WS+F NLDG+  +KVEPLF+SKVNTVFQ         QPEFG  +TQ +I
Sbjct: 247  ALNLDWKWKNWSDFFNLDGSSPQKVEPLFISKVNTVFQLALVAGAILQPEFGNPDTQTWI 306

Query: 1171 TYLSWLVASTTVASTVAYGAQ 1233
            TYLSWLVASTT+AST AYG Q
Sbjct: 307  TYLSWLVASTTMASTAAYGVQ 327


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