BLASTX nr result

ID: Coptis24_contig00002455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002455
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...   207   7e-52
ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250...   194   6e-48
emb|CBI16424.3| unnamed protein product [Vitis vinifera]              194   6e-48
ref|XP_002513463.1| conserved hypothetical protein [Ricinus comm...   191   4e-47

>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  207 bits (527), Expect = 7e-52
 Identities = 109/175 (62%), Positives = 136/175 (77%), Gaps = 8/175 (4%)
 Frame = -3

Query: 521  TITMEKMPESGTDAALQATFRFVSENLNSSE----NSFIGKTVMMEPFDLPGLLVVQQGK 354
            +ITME+ P+SGTDA LQATFR V  + +SSE    N  I K+VM+EPFDLPG+L+VQQGK
Sbjct: 681  SITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGINDVIDKSVMLEPFDLPGMLLVQQGK 740

Query: 353  NQTLAVGDT---EGSSMFRVVKGLDGK-GTVSLESVSQKGCFLYTGVNYKAGTKIKLSCQ 186
            + +LAV ++   +GSS+F VV GLDGK GTVSLES SQ+GC++Y+GVNYK+G  +KLSC+
Sbjct: 741  DSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLESGSQEGCYIYSGVNYKSGQSMKLSCK 800

Query: 185  SGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFS 21
             G  D  F Q  SF ++KGLSEYHPISFVA G KR FLL PL S+RDE YT+YF+
Sbjct: 801  LGSSDPGFNQGASFVMNKGLSEYHPISFVAEGDKRNFLLAPLHSLRDEFYTIYFN 855


>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score =  202 bits (515), Expect = 2e-50
 Identities = 107/176 (60%), Positives = 138/176 (78%), Gaps = 9/176 (5%)
 Frame = -3

Query: 521  TITMEKMPESGTDAALQATFRFVSENLNSSENS----FIGKTVMMEPFDLPGLLVVQQGK 354
            +I+MEK+PESGTDA+LQATFR V ++ +SS+ S     IGK+VM+EPF LPG+L+VQQGK
Sbjct: 680  SISMEKLPESGTDASLQATFRLVFKDSSSSKLSSVKDVIGKSVMLEPFHLPGMLLVQQGK 739

Query: 353  NQTLAV---GDTEGSSMFRVVKGLDGK-GTVSLESVSQKGCFLYTGVNYKAGTKIKLSCQ 186
            +++  +    D +GSS+FRVV GLDGK GTVSLES  Q GC++Y+GV+YK+G  +KLSC+
Sbjct: 740  DRSFTLTNSADDDGSSIFRVVSGLDGKDGTVSLESGIQNGCYVYSGVDYKSGQSMKLSCK 799

Query: 185  SGLK-DAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFS 21
            SG   D  F Q  SF ++KGLS+YHPISFVA G KR FLL PL S+RDESYT+YF+
Sbjct: 800  SGSSSDTGFNQGASFVMNKGLSQYHPISFVAKGDKRNFLLAPLHSLRDESYTIYFN 855


>ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]
          Length = 874

 Score =  194 bits (493), Expect = 6e-48
 Identities = 103/180 (57%), Positives = 132/180 (73%), Gaps = 8/180 (4%)
 Frame = -3

Query: 521  TITMEKMPESGTDAALQATFRFVSENLNSSENSF----IGKTVMMEPFDLPGLLVVQQGK 354
            ++TME+ PESGTDA+L ATFR + E+  SS+ S     IGK VM+EP + PG+ VVQ+G 
Sbjct: 689  SLTMERYPESGTDASLNATFRLILEDSTSSKISSPKDAIGKFVMLEPINFPGMAVVQRGT 748

Query: 353  NQTLAVGDTE---GSSMFRVVKGLDGK-GTVSLESVSQKGCFLYTGVNYKAGTKIKLSCQ 186
            N++L + ++    GSS+F +V GLDGK GTVSLES +QKGCF+Y+ VNY +G+ IKL C+
Sbjct: 749  NESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESKTQKGCFVYSDVNYDSGSAIKLKCK 808

Query: 185  SGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFSRGA*N 6
                D  F QATSF L  G+SEYHPISFVA G +R +LL PLLS+RDESYTVYF+  A N
Sbjct: 809  LASSDVVFNQATSFTLKHGISEYHPISFVAKGLRRDYLLAPLLSLRDESYTVYFNIQASN 868


>emb|CBI16424.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score =  194 bits (493), Expect = 6e-48
 Identities = 103/180 (57%), Positives = 132/180 (73%), Gaps = 8/180 (4%)
 Frame = -3

Query: 521  TITMEKMPESGTDAALQATFRFVSENLNSSENSF----IGKTVMMEPFDLPGLLVVQQGK 354
            ++TME+ PESGTDA+L ATFR + E+  SS+ S     IGK VM+EP + PG+ VVQ+G 
Sbjct: 556  SLTMERYPESGTDASLNATFRLILEDSTSSKISSPKDAIGKFVMLEPINFPGMAVVQRGT 615

Query: 353  NQTLAVGDTE---GSSMFRVVKGLDGK-GTVSLESVSQKGCFLYTGVNYKAGTKIKLSCQ 186
            N++L + ++    GSS+F +V GLDGK GTVSLES +QKGCF+Y+ VNY +G+ IKL C+
Sbjct: 616  NESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESKTQKGCFVYSDVNYDSGSAIKLKCK 675

Query: 185  SGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFSRGA*N 6
                D  F QATSF L  G+SEYHPISFVA G +R +LL PLLS+RDESYTVYF+  A N
Sbjct: 676  LASSDVVFNQATSFTLKHGISEYHPISFVAKGLRRDYLLAPLLSLRDESYTVYFNIQASN 735


>ref|XP_002513463.1| conserved hypothetical protein [Ricinus communis]
            gi|223547371|gb|EEF48866.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 759

 Score =  191 bits (486), Expect = 4e-47
 Identities = 99/175 (56%), Positives = 131/175 (74%), Gaps = 8/175 (4%)
 Frame = -3

Query: 521  TITMEKMPESGTDAALQATFRFVSENLNSSE----NSFIGKTVMMEPFDLPGLLVVQQGK 354
            ++TME  P+ GTD ++ ATFR +  + +SSE       +GK VM+EPF+LPG+L+VQQGK
Sbjct: 583  SLTMEIFPQPGTDDSVHATFRLILNDSSSSELANFEDAVGKLVMLEPFNLPGMLLVQQGK 642

Query: 353  NQTLAVGDTEGS---SMFRVVKGLDGK-GTVSLESVSQKGCFLYTGVNYKAGTKIKLSCQ 186
              +LAVG T+GS   S+FR+V GLDGK G+VSLESVS + CF+++GV+YK+GT +KLSC+
Sbjct: 643  EVSLAVGYTDGSDGSSLFRLVSGLDGKDGSVSLESVSNENCFVFSGVDYKSGTALKLSCK 702

Query: 185  SGLKDAAFPQATSFKLSKGLSEYHPISFVANGAKRKFLLMPLLSMRDESYTVYFS 21
                +  F Q  SF ++KG+S YHPISFVA GAKR FLL PL S RDESYT+YF+
Sbjct: 703  KS-SETKFNQGASFMVNKGISHYHPISFVAKGAKRNFLLSPLFSFRDESYTIYFN 756


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