BLASTX nr result

ID: Coptis24_contig00002446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002446
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263469.1| PREDICTED: E3 ubiquitin-protein ligase KEG [...   124   4e-26
emb|CAN73176.1| hypothetical protein VITISV_007720 [Vitis vinifera]   124   4e-26
ref|NP_196857.2| E3 ubiquitin-protein ligase KEG [Arabidopsis th...   122   1e-25
ref|NP_001190303.1| E3 ubiquitin-protein ligase KEG [Arabidopsis...   122   1e-25
emb|CAC05430.1| ankyrin-repeat containing protein [Arabidopsis t...   122   1e-25

>ref|XP_002263469.1| PREDICTED: E3 ubiquitin-protein ligase KEG [Vitis vinifera]
            gi|296087851|emb|CBI35107.3| unnamed protein product
            [Vitis vinifera]
          Length = 1631

 Score =  124 bits (311), Expect = 4e-26
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = +1

Query: 796  RCRHKVAVKRVILGEDSDLVWVQSQLEVLRRSSMWCRNVSTFHGAMRMDGKLCLIMDKYV 975
            RCRH VA K+V++GED+DL WVQ++L+ LRR+SMWCRNV TFHGA +M+G LCLIMD+  
Sbjct: 165  RCRHGVAAKKVVVGEDTDLGWVQNRLDNLRRASMWCRNVCTFHGATKMEGSLCLIMDRCN 224

Query: 976  GSVESEMRMNEGRLTLEQIL 1035
            GSV+SEM+ NEGRLTLEQIL
Sbjct: 225  GSVQSEMQRNEGRLTLEQIL 244


>emb|CAN73176.1| hypothetical protein VITISV_007720 [Vitis vinifera]
          Length = 1662

 Score =  124 bits (311), Expect = 4e-26
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = +1

Query: 796  RCRHKVAVKRVILGEDSDLVWVQSQLEVLRRSSMWCRNVSTFHGAMRMDGKLCLIMDKYV 975
            RCRH VA K+V++GED+DL WVQ++L+ LRR+SMWCRNV TFHGA +M+G LCLIMD+  
Sbjct: 165  RCRHGVAAKKVVVGEDTDLGWVQNRLDNLRRASMWCRNVCTFHGATKMEGSLCLIMDRCN 224

Query: 976  GSVESEMRMNEGRLTLEQIL 1035
            GSV+SEM+ NEGRLTLEQIL
Sbjct: 225  GSVQSEMQRNEGRLTLEQIL 244


>ref|NP_196857.2| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
            gi|218526495|sp|Q9FY48.2|KEG_ARATH RecName: Full=E3
            ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP
            ON GOING; AltName: Full=RING finger protein KEG
            gi|83817349|gb|ABC46683.1| RING E3 ligase protein
            [Arabidopsis thaliana] gi|332004525|gb|AED91908.1| E3
            ubiquitin-protein ligase KEG [Arabidopsis thaliana]
          Length = 1625

 Score =  122 bits (306), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = +1

Query: 796  RCRHKVAVKRVILGEDSDLVWVQSQLEVLRRSSMWCRNVSTFHGAMRMDGKLCLIMDKYV 975
            RC+H+VAVK++ L ED D+ W+Q QLE LRR+SMWCRNV TFHG ++MDG LCL+MD+  
Sbjct: 168  RCKHRVAVKKMTLTEDMDVEWMQGQLESLRRASMWCRNVCTFHGVVKMDGSLCLLMDRCF 227

Query: 976  GSVESEMRMNEGRLTLEQIL 1035
            GSV+SEM+ NEGRLTLEQIL
Sbjct: 228  GSVQSEMQRNEGRLTLEQIL 247


>ref|NP_001190303.1| E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana]
            gi|332004526|gb|AED91909.1| E3 ubiquitin-protein ligase
            KEG [Arabidopsis thaliana]
          Length = 1624

 Score =  122 bits (306), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = +1

Query: 796  RCRHKVAVKRVILGEDSDLVWVQSQLEVLRRSSMWCRNVSTFHGAMRMDGKLCLIMDKYV 975
            RC+H+VAVK++ L ED D+ W+Q QLE LRR+SMWCRNV TFHG ++MDG LCL+MD+  
Sbjct: 168  RCKHRVAVKKMTLTEDMDVEWMQGQLESLRRASMWCRNVCTFHGVVKMDGSLCLLMDRCF 227

Query: 976  GSVESEMRMNEGRLTLEQIL 1035
            GSV+SEM+ NEGRLTLEQIL
Sbjct: 228  GSVQSEMQRNEGRLTLEQIL 247


>emb|CAC05430.1| ankyrin-repeat containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  122 bits (306), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = +1

Query: 796  RCRHKVAVKRVILGEDSDLVWVQSQLEVLRRSSMWCRNVSTFHGAMRMDGKLCLIMDKYV 975
            RC+H+VAVK++ L ED D+ W+Q QLE LRR+SMWCRNV TFHG ++MDG LCL+MD+  
Sbjct: 168  RCKHRVAVKKMTLTEDMDVEWMQGQLESLRRASMWCRNVCTFHGVVKMDGSLCLLMDRCF 227

Query: 976  GSVESEMRMNEGRLTLEQIL 1035
            GSV+SEM+ NEGRLTLEQIL
Sbjct: 228  GSVQSEMQRNEGRLTLEQIL 247


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