BLASTX nr result

ID: Coptis24_contig00002445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00002445
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G...   298   1e-78
ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G...   292   1e-76
ref|XP_002529320.1| cellulose synthase, putative [Ricinus commun...   285   1e-74
gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]    283   6e-74
emb|CBI26390.3| unnamed protein product [Vitis vinifera]              279   9e-73

>ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]
          Length = 740

 Score =  298 bits (764), Expect = 1e-78
 Identities = 169/358 (47%), Positives = 225/358 (62%), Gaps = 11/358 (3%)
 Frame = +3

Query: 174  FKESVEKARE--SGETCLYPGQERPALIEVIRDKTMDENDKNQVQMPLLVHVSREKKTKL 347
            FKE +E+ +E  SG+T    GQ  P +IEVI++ +  E +  QV++P LV+VSREKK   
Sbjct: 209  FKEDIERVKEDHSGDTTGIKGQNHPPIIEVIQENSSSEIE--QVKLPFLVYVSREKKPSH 266

Query: 348  SSQLQSWSY*---RPSSRVRHNKQCTFCTSLGL*HVLQCPTSARQAMCFHLDPLLSRSLS 518
                ++ +     R S+ + +     +   L        P SARQA+CFHLDP +S SL+
Sbjct: 267  PHHFKAGALNVLYRVSAVISN---APYILVLDCDMFCNAPASARQALCFHLDPKISLSLA 323

Query: 519  FVQFPQCFHNLSKNDIYNNTMRLIFKIW*YGLDGLRGPVLSGTGFYLKRESLY-----KT 683
            FVQFPQ +HN+SKNDIY++  R  +K+   G+DGLRGPVLSGTGFY+KRESLY     K 
Sbjct: 324  FVQFPQKYHNISKNDIYDSQHRSAYKVLWQGMDGLRGPVLSGTGFYMKRESLYGNYKIKA 383

Query: 684  SRQEAKKLFGTSDGFITSTRGYKRDNVIDNEVTTKKLLEEDRFV-ASCTYEQNTEWGKQV 860
            +  E ++  GTS+GFI S    K+    D++     L EE+  + ASC YE  TEWGK+V
Sbjct: 384  TDLELRQYVGTSNGFIKSL---KQHCTPDSDTVGHTLPEEETLLLASCNYEIGTEWGKEV 440

Query: 861  GFRYQSVGEDVLTGMLLHSKGWISVYCDPQRPAFLGTGNTNLYDTLIQFTRWMSGLLQVS 1040
            GF Y +V EDV TG  L+  GW SV CDP +P FLG G TNL D LIQ TRW  GLL + 
Sbjct: 441  GFLYGTVCEDVHTGFTLNCNGWNSVLCDPPQPQFLGNGTTNLNDLLIQGTRWYCGLLDIG 500

Query: 1041 LSKLCPLTYRPSQMPVLQIMGYSYIIFMPLNSVFVLCHCIIPQLCFLNGIALYPKVSD 1214
            LS+ CPL   P +M +LQ + Y+ + + PL  + + C  I+PQLC ++GI LYPKVSD
Sbjct: 501  LSRFCPLICGPLRMSLLQSLCYAQLTYFPLYCLPLWCLAIVPQLCLVDGIPLYPKVSD 558


>ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]
          Length = 736

 Score =  292 bits (748), Expect = 1e-76
 Identities = 168/363 (46%), Positives = 226/363 (62%), Gaps = 16/363 (4%)
 Frame = +3

Query: 174  FKESVEKARESGETCLYPGQERPALIEVIRDKTMDENDKNQVQMPLLVHVSREKKTKLSS 353
            FKE ++  R+         ++ P++IEV+++  +D+ D   V+MPLLV+VSREKK     
Sbjct: 209  FKEEIKTFRKDRTF----SRDYPSVIEVMQETIIDDVD--DVKMPLLVYVSREKKPSHPH 262

Query: 354  QLQSWSY*---RPSSRVRHNKQCTFCTSLGL*HVLQC------PTSARQAMCFHLDPLLS 506
              ++ +     R SS + ++             VL C      PTSAR AMCFHLDP +S
Sbjct: 263  HFKAGALNVLLRVSSVMSNSPYIL---------VLDCDMFCNDPTSARYAMCFHLDPKIS 313

Query: 507  RSLSFVQFPQCFHNLSKNDIYNNTMRLIFKIW*YGLDGLRGPVLSGTGFYLKRESLYK-- 680
             SL+FVQFPQ FHN+SKNDIY++ +R IF +   G+DGL GPV+SGTGFY+KR SL+   
Sbjct: 314  SSLAFVQFPQKFHNISKNDIYDSQLRSIFTLQWQGMDGLMGPVISGTGFYIKRVSLFGNF 373

Query: 681  ----TSRQEAKKLFGTSDGFITS-TRGYKRDNVIDNEVTTKKLLEEDRFVASCTYEQNTE 845
                T   + K+ FG+S+ FI S  + Y  D V   +     LLEE  F+ASC YE  T+
Sbjct: 374  ARKGTDLLQLKEYFGSSNEFIRSLNQNYTSDLVSGQKYA---LLEEPHFLASCNYEIGTK 430

Query: 846  WGKQVGFRYQSVGEDVLTGMLLHSKGWISVYCDPQRPAFLGTGNTNLYDTLIQFTRWMSG 1025
            WG++VGF Y SV ED LTG +L+  GW SV+C+P RP FLG+  TNL D LIQ TRW SG
Sbjct: 431  WGQEVGFSYVSVVEDYLTGFILNCNGWTSVFCEPSRPQFLGSATTNLNDVLIQGTRWYSG 490

Query: 1026 LLQVSLSKLCPLTYRPSQMPVLQIMGYSYIIFMPLNSVFVLCHCIIPQLCFLNGIALYPK 1205
            L +  +++ CPLTY  S+MP+LQ +  +++ + PL    + C   IPQLC LNGI LYPK
Sbjct: 491  LFENGINRFCPLTYGLSKMPLLQSLCLAWLTYFPLYCFPLWCFATIPQLCLLNGIPLYPK 550

Query: 1206 VSD 1214
            VSD
Sbjct: 551  VSD 553


>ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis]
            gi|223531244|gb|EEF33089.1| cellulose synthase, putative
            [Ricinus communis]
          Length = 711

 Score =  285 bits (730), Expect = 1e-74
 Identities = 160/358 (44%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
 Frame = +3

Query: 174  FKESVEKARESGET---CLYPGQERPALIEVIRDKTMDENDKNQVQMPLLVHVSREKKTK 344
            FKE VE+A E+ E+         + P L+EVI DK+ ++    Q ++PLLV+VSREK+  
Sbjct: 202  FKERVERAEENDESEDESNIGNNDHPPLVEVIHDKSSNDY---QTEIPLLVYVSREKRPN 258

Query: 345  LSSQLQSWSY*---RPSSRVRHNKQCTFCTSLGL*HVLQC------PTSARQAMCFHLDP 497
            L    ++ +     R S  + ++             VL C      PTSARQAMCFHLDP
Sbjct: 259  LPHHFKAGALNVLLRVSGIITNSPYLL---------VLDCDMYCNDPTSARQAMCFHLDP 309

Query: 498  LLSRSLSFVQFPQCFHNLSKNDIYNNTMRLIFKIW*YGLDGLRGPVLSGTGFYLKRESLY 677
             +S SL+FVQFPQ F+N+SK+DIY+  +R +F I   G+DGL+GP+LSGTGFY+KR +LY
Sbjct: 310  KISSSLAFVQFPQKFYNISKSDIYDAQIRTLFVIMWPGVDGLQGPILSGTGFYIKRNALY 369

Query: 678  KTSRQEAKKLFGTSDGFITSTRGYKRDNVIDNEVTTKKLLEEDRFVASCTYEQNTEWGKQ 857
                          D          + N+ DN  ++ KLL+E +F+A   YEQ+T WG+Q
Sbjct: 370  --------------DNLSFKIHYSNQHNIHDNRYSSGKLLQEAQFLAKSIYEQHTLWGQQ 415

Query: 858  VGFRYQSVGEDVLTGMLLHSKGWISVYCDPQRPAFLGTGNTNLYDTLIQFTRWMSGLLQV 1037
            +GF Y SV ED  TGM+LH KGW SV+C+P  PAFLG+  T L DTLIQ TRW SGL++V
Sbjct: 416  IGFLYGSVVEDYFTGMILHCKGWTSVFCNPSIPAFLGSATTKLNDTLIQGTRWYSGLMEV 475

Query: 1038 SLSKLCPLTYRPSQMPVLQIMGYSYIIFMPLNSVFVLCHCIIPQLCFLNGIALYPKVS 1211
            + S+ CP  Y  S+MP+LQ + Y  +   P  S  + C   +PQLC  NGI  +PKVS
Sbjct: 476  TFSRFCPFIYGVSKMPLLQTLCYGCLALQPAYSFPLWCLATLPQLCLFNGIPTFPKVS 533


>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score =  283 bits (724), Expect = 6e-74
 Identities = 165/360 (45%), Positives = 218/360 (60%), Gaps = 14/360 (3%)
 Frame = +3

Query: 174  FKESVEKARES-GETCLYPGQERPALIEVIRDKTMDENDKNQVQMPLLVHVSREKKTKLS 350
            FKE V KA E  G       ++ P +IEVI D   +E    Q +MPLLV+VSREK+   S
Sbjct: 204  FKERVNKAGEIIGSEEATSSKDHPPVIEVIDDGPENEAGIRQAKMPLLVYVSREKRPSHS 263

Query: 351  SQLQSWSY*---RPSSRVRHNKQCTFCTSLGL*HVLQC------PTSARQAMCFHLDPLL 503
               ++ +     R S  + ++             VL C      PTSARQAMCFHLDP +
Sbjct: 264  HHFKAGALNVLLRVSGIITNSPYIL---------VLDCDMYCNDPTSARQAMCFHLDPAI 314

Query: 504  SRSLSFVQFPQCFHNLSKNDIYNNTMRLIFKIW*YGLDGLRGPVLSGTGFYLKRESLYKT 683
            S SL+F+QFPQ FHN++KNDIY+  +R IF I   G+DGL+GPVLSGTGFY+KRE+LY  
Sbjct: 315  SPSLAFIQFPQKFHNINKNDIYDGQLRKIFVIRWPGIDGLQGPVLSGTGFYMKREALYGN 374

Query: 684  SRQE----AKKLFGTSDGFITSTRGYKRDNVIDNEVTTKKLLEEDRFVASCTYEQNTEWG 851
              ++     K+ FG S+ FI S     + + I N  ++ KL +E +F++SCTYE+NT W 
Sbjct: 375  LSEKDVMRLKQSFGHSNEFIMSIHKIYQYSSIKNTESSSKLQQEAQFLSSCTYEKNTLWV 434

Query: 852  KQVGFRYQSVGEDVLTGMLLHSKGWISVYCDPQRPAFLGTGNTNLYDTLIQFTRWMSGLL 1031
                       ED  TG +LH KG  SV+C+P +PAFLG+  TNL D L+Q TRW SGL 
Sbjct: 435  -----------EDYFTGFILHCKGKTSVFCNPSKPAFLGSSTTNLNDLLVQGTRWNSGLF 483

Query: 1032 QVSLSKLCPLTYRPSQMPVLQIMGYSYIIFMPLNSVFVLCHCIIPQLCFLNGIALYPKVS 1211
            +V+LSK CP  Y  S+MP+LQ M Y Y+   PL  + + C   +PQLC LNGI +YP+VS
Sbjct: 484  EVTLSKFCPFIYGLSRMPLLQTMCYGYLALQPLYFLPLWCLATLPQLCLLNGIPIYPQVS 543


>emb|CBI26390.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  279 bits (714), Expect = 9e-73
 Identities = 155/343 (45%), Positives = 213/343 (62%), Gaps = 16/343 (4%)
 Frame = +3

Query: 231  QERPALIEVIRDKTMDENDKNQVQMPLLVHVSREKKTKLSSQLQSWSY*---RPSSRVRH 401
            ++ PA +EVI          +QV+MPLLV+VSREK+       ++ +     R S  + +
Sbjct: 36   RDHPAGVEVI--------GADQVEMPLLVYVSREKRPSHPHHFKAGALNVLLRVSGLISN 87

Query: 402  NKQCTFCTSLGL*HVLQC------PTSARQAMCFHLDPLLSRSLSFVQFPQCFHNLSKND 563
            +             +L C      PTSA++AMCFHLDP +S +L+FVQFPQ FHN+SKND
Sbjct: 88   SPYIL---------ILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKND 138

Query: 564  IYNNTMRLIFKIW*YGLDGLRGPVLSGTGFYLKRESLYKTSRQE------AKKLFGTSDG 725
            IY++ +R  F I   GLDGL+GP+L GT FY+KR + Y +  Q+       ++ FG S+ 
Sbjct: 139  IYDSGVRSAFSILLEGLDGLQGPILCGTCFYIKRVAFYGSFIQDDIDILKLRESFGPSNE 198

Query: 726  FITST-RGYKRDNVIDNEVTTKKLLEEDRFVASCTYEQNTEWGKQVGFRYQSVGEDVLTG 902
            FI S  + YK     D    +   L+E + +ASC+YE  T+WGK+VGF YQSV ED LTG
Sbjct: 199  FIRSLGQNYKPSVSKDGNSLSTIQLQETQLLASCSYENQTKWGKEVGFLYQSVVEDYLTG 258

Query: 903  MLLHSKGWISVYCDPQRPAFLGTGNTNLYDTLIQFTRWMSGLLQVSLSKLCPLTYRPSQM 1082
             ++H +GW SVYC+P +P FLG+G TN+ D L+Q TRW SGL  V++SK  PL Y P +M
Sbjct: 259  FIMHCRGWTSVYCNPSKPQFLGSGVTNMNDMLVQGTRWSSGLFDVAISKFSPLIYGPLRM 318

Query: 1083 PVLQIMGYSYIIFMPLNSVFVLCHCIIPQLCFLNGIALYPKVS 1211
             +L+   Y+Y+ + PL  + V C  IIPQLC LNGI LYPKV+
Sbjct: 319  SILESFCYAYLAYFPLYFISVWCFGIIPQLCLLNGIPLYPKVT 361


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